--- doc/loncapafiles/loncapafiles.lpml	2002/05/29 20:57:30	1.131
+++ doc/loncapafiles/loncapafiles.lpml	2002/07/25 14:58:07	1.146
@@ -3,7 +3,7 @@
 <!-- loncapafiles.lpml -->
 <!-- Scott Harrison -->
 
-<!-- $Id: loncapafiles.lpml,v 1.131 2002/05/29 20:57:30 www Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.146 2002/07/25 14:58:07 matthew Exp $ -->
 
 <!--
 
@@ -260,49 +260,49 @@ echo '**********************************
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/init.d</targetdir>
-  <targetdir dist='debian2.2'>etc/init.d</targetdir>
+  <targetdir dist='debian'>etc/init.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run during system startup</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc0.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc0.d</targetdir>
+  <targetdir dist='debian'>etc/rc0.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 0</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc1.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc1.d</targetdir>
+  <targetdir dist='debian'>etc/rc1.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 1</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc2.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc2.d</targetdir>
+  <targetdir dist='debian'>etc/rc2.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 2</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc3.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc3.d</targetdir>
+  <targetdir dist='debian'>etc/rc3.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 3</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc4.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc4.d</targetdir>
+  <targetdir dist='debian'>etc/rc4.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 4</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc5.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc5.d</targetdir>
+  <targetdir dist='debian'>etc/rc5.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 5</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>etc/rc.d/rc6.d</targetdir>
-  <targetdir dist='debian2.2'>etc/rc6.d</targetdir>
+  <targetdir dist='debian'>etc/rc6.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 6</description>
 </directory>
@@ -415,6 +415,26 @@ Used by lond parent to check if children
   <description>online help documentation</description>
 </directory>
 <directory dist='default'>
+  <targetdir dist='default'>home/httpd/html/adm/help/gif</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>online help documentation gif files</description>
+</directory>
+<directory dist='default'>
+  <targetdir dist='default'>home/httpd/html/adm/help/eps</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>online help documentation eps files</description>
+</directory>
+<directory dist='default'>
+  <targetdir dist='default'>home/httpd/html/adm/help/tex</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>online help documentation tex files</description>
+</directory>
+<directory dist='default'>
+  <targetdir dist='default'>home/httpd/html/adm/help/png</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>online help documentation png files</description>
+</directory>
+<directory dist='default'>
   <targetdir dist='default'>home/httpd/html/adm/help/lib/perl</targetdir>
   <categoryname>server readonly</categoryname>
   <description>online help documentation for the LON-CAPA programming
@@ -483,7 +503,8 @@ LON-CAPA system.</description>
 <directory dist='default'>
   <targetdir dist='default'>home/httpd/html/lon-status</targetdir>
   <categoryname>server standard</categoryname>
-  <description>status reports</description>
+  <description>status reports; online logs are kept that
+are viewable over the world-wide web</description>
 </directory>
 <directory dist='default'>
   <targetdir dist='default'>home/httpd/html/res/adm/pages</targetdir>
@@ -511,7 +532,7 @@ LON-CAPA system.</description>
 <directory dist='default'>
   <targetdir dist='default'>usr/lib/perl5/site_perl/5.005</targetdir>
   <targetdir dist='redhat7 redhat7.1'>usr/lib/perl5/site_perl/5.6.0</targetdir>
-  <targetdir dist='debian2.2'>usr/local/lib/perl/5.6.0</targetdir>
+  <targetdir dist='debian'>usr/local/lib/perl/5.6.0</targetdir>
   <categoryname>standard</categoryname>
   <description>system perl tree (usually present on linux systems)
   </description>
@@ -639,13 +660,18 @@ well as causing the Apache module to be
 </description>
 </file>
 <file>
-<source>loncom/publisher/thesaurus.dat</source>
-<target dist='default'>home/httpd/lonTabs/thesaurus.dat</target>
-<categoryname>static conf</categoryname>
+<source>loncom/thesaurus/thesaurus.db</source>
+<target dist='default'>home/httpd/lonTabs/thesaurus.db</target>
+<categoryname>system file</categoryname>
 <description>
-Custom Thesaurus file for LON-CAPA, in the format
-word@wordID@frequency@relatedwordID:frequency,relatedwordID:frequency,...
+Thesaurus database file to be built from loncom/thesaurus/rawkey.txt
 </description>
+<build trigger='run if dependencies change'>
+loncom/thesaurus/build_thesaurus_wrapper.sh
+</build>
+<dependencies>
+rawkey.txt
+</dependencies>
 </file>
 <file>
 <source>loncom/interface/mydesk.tab</source>
@@ -664,6 +690,14 @@ Descriptive list of file extensions, and
 </description>
 </file>
 <file>
+<source>loncom/interface/filecategories.tab</source>
+<target dist='default'>home/httpd/lonTabs/filecategories.tab</target>
+<categoryname>static conf</categoryname>
+<description>
+Descriptive list of file extensions and broad categorization.
+</description>
+</file>
+<file>
 <source>loncom/cgi/barcode.gif</source>
 <target dist='default'>home/httpd/cgi-bin/barcode.gif</target>
 <categoryname>script</categoryname>
@@ -769,12 +803,14 @@ blank.library;
 blank.library.meta;
 blank.problem;
 blank.problem.meta;
-formula.problem;
-formula.problem.meta;
 numerical.problem;
 numerical.problem.meta;
+Plot.problem;
+Plot.problem.meta;
 RadioResponse.problem;
 RadioResponse.problem.meta;
+RandomLabelExample.problem;
+RandomLabelExample.problem.meta;
 SelectFromOptions-4ConceptGoups.problem;
 SelectFromOptions-4ConceptGoups.problem.meta;
 SelectFromOptions-5ConceptGoups.problem;
@@ -789,8 +825,8 @@ SelectFromOptions-Simple.problem;
 SelectFromOptions-Simple.problem.meta;
 script.library;
 script.library.meta;
-SimpleStringResponse.problem;
-SimpleStringResponse.problem.meta;
+SimpleFormula.problem;
+SimpleFormula.problem.meta;
 StringResponse.problem;
 StringResponse.problem.meta
 </filenames>
@@ -1095,7 +1131,7 @@ new user.
 <target dist='default'>home/httpd/perl/lchtmldir</target>
 <categoryname>setuid script</categoryname>
 <description>
-Manages the file system rammifications of adding author mode to a user. 
+Manages the file system ramifications of adding author mode to a user. 
 If necessary a public_html diretory is added, permissions and ownership are
 set according to the user's authentication mode.
 </description>
@@ -1182,7 +1218,7 @@ The relevant conditions and metadata to
 </description>
 </file>
 <file>
-<source>loncom/misc/un_keyword.tab</source>
+<source>loncom/thesaurus/un_keyword.tab</source>
 <target dist='default'>home/httpd/html/res/adm/includes/un_keyword.tab</target>
 <categoryname>conf</categoryname>
 <description>
@@ -1236,6 +1272,33 @@ Edit handler for rat maps; TeX content h
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/londocs.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/londocs.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler for course documents
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/lonchat.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonchat.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler for chat
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/lonannounce.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonannounce.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to put up announcements and calendar
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/publisher/loncfile.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/loncfile.pm</target>
 <categoryname>handler</categoryname>
@@ -1246,6 +1309,202 @@ construction space menu.
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonhelp.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonhelp.pm</target>
+<categoryname>handler</categoryname>
+<description>
+The .tex file help handler.
+</description>
+<status>works/unverified</status>
+<build trigger='always run'>loncom/build/buildHelp.sh</build>
+</file>
+<file>
+<source>/doc/help/author.manual.ps</source>
+<target dist='default'>home/httpd/html/adm/help/author.manual.ps</target>
+<categoryname>handler</categoryname>
+<description>
+The rendered Author's Manual
+</description>
+<status>works/unverified</status>
+</file>
+<fileglob>
+<glob>*.*</glob>
+<sourcedir>loncom/html/adm/help/gif/</sourcedir>
+<targetdir dist='default'>
+home/httpd/html/adm/help/gif/</targetdir>
+<categoryname>handler</categoryname>
+<description>
+Gif files for the help system
+</description>
+<filenames>
+authorRemote.gif;
+constructionSpace.gif;
+constructionSpaceForPublishing.gif;
+creatingANewCourse.gif;
+creatingNewProblemResource.gif;
+formulaResponse.gif;
+login.gif;
+mapAdvancedEditorNew.gif;
+mapClickedStart.gif;
+mapEditFirstClick.gif;
+mapEditInitial.gif;
+mapEditingButton.gif;
+mapEditorDirectoryBrowser.gif;
+mapEditorResourceChosen.gif;
+mapEditorSelection.gif;
+mapInsertResource.gif;
+mapNewResource.gif;
+mapSecondWindowSecondResource.gif;
+mapSimpleEditor.gif;
+mapStraightened.gif;
+mapTwoResources.gif;
+numericalResponse1.gif;
+numericalResponseEditor.gif;
+numericalResponseSlopeProblem.gif;
+numericalResponseVarInText.gif;
+optionResponseEditing.gif;
+optionResponseProblem.gif;
+publishMetadata.gif;
+radioResponse2.gif;
+radioResponseHint.gif;
+smallHelp.gif;
+stringResponseEditor.gif;
+studentInterface.gif;
+</filenames>
+</fileglob>
+<fileglob>
+<glob>*.*</glob>
+<sourcedir>loncom/html/adm/help/eps/</sourcedir>
+<targetdir dist='default'>
+home/httpd/html/adm/help/eps/</targetdir>
+<categoryname>handler</categoryname>
+<description>
+EPS files for the help system
+</description>
+<filenames>
+authorRemote.eps;
+constructionSpace.eps;
+constructionSpaceForPublishing.eps;
+creatingANewCourse.eps;
+creatingNewProblemResource.eps;
+formulaResponse.eps;
+login.eps;
+mapAdvancedEditorNew.eps;
+mapClickedStart.eps;
+mapEditFirstClick.eps;
+mapEditInitial.eps;
+mapEditingButton.eps;
+mapEditorDirectoryBrowser.eps;
+mapEditorResourceChosen.eps;
+mapEditorSelection.eps;
+mapInsertResource.eps;
+mapNewResource.eps;
+mapSecondWindowSecondResource.eps;
+mapSimpleEditor.eps;
+mapStraightened.eps;
+mapTwoResources.eps;
+numericalResponse1.eps;
+numericalResponseEditor.eps;
+numericalResponseSlopeProblem.eps;
+numericalResponseVarInText.eps;
+optionResponseEditing.eps;
+optionResponseProblem.eps;
+publishMetadata.eps;
+radioResponse2.eps;
+radioResponseHint.eps;
+smallHelp.eps;
+stringResponseEditor.eps;
+studentInterface.eps;
+</filenames>
+</fileglob>
+<fileglob>
+<glob>*.*</glob>
+<sourcedir>loncom/html/adm/help/tex/</sourcedir>
+<targetdir dist='default'>
+home/httpd/html/adm/help/tex/</targetdir>
+<categoryname>handler</categoryname>
+<description>
+Tex files for the help system
+</description>
+<filenames>
+About_Authors_Manual.tex;
+About_Numerical_and_Formula_Response.tex;
+Author_LON-CAPA_Introduction.tex;
+Author_Manual_Title_Page.tex;
+Author_Numerical_and_Formula.tex;
+Author_Remote_Control.tex;
+Calling_Functions.tex;
+Construction_Space_Overview.tex;
+Creating_A_Course_Intro.tex;
+Creating_New_Content_Pages.tex;
+Creating_Online_Problems.tex;
+Creating_Radio_Response_Problems.tex;
+Foils.tex;
+Formula_Response_Example.tex;
+Formula_Response_Limitations.tex;
+Formula_Response_Problems.tex;
+Formula_Response_Sampling.tex;
+Formula_Tolerance.tex;
+How_To_Edit_Existing_Content_Pages.tex;
+Latex_Footer.tex;
+Latex_Header.tex;
+Login_To_LON-CAPA.tex;
+Metadata_Description.tex;
+Numerical_Response_Advanced_Example.tex;
+Numerical_Response_Format.tex;
+Numerical_Response_Intro.tex;
+Numerical_Response_Introduction.tex;
+Numerical_Response_Parts_A.tex;
+Numerical_Response_Parts_B.tex;
+Numerical_Response_Problems.tex;
+Numerical_Response_Randomization.tex;
+Numerical_Response_Simple_Example.tex;
+Numerical_Response_Tutorial_A.tex;
+Numerical_Response_Units.tex;
+Option_Response_Concept_Group_Example.tex;
+Option_Response_Matching_Example.tex;
+Option_Response_Problem_Creation.tex;
+Option_Response_Problem_Figure.tex;
+Option_Response_Problem_Parts.tex;
+Option_Response_Problems.tex;
+Option_Response_Simple.tex;
+Problem_Editor_Testing_Area.tex;
+Problem_Types.tex;
+Publishing_A_Resource.tex;
+Publishing_Author_Tutorial_Segue.tex;
+Publishing_Intro.tex;
+Radio_Response_Problems.tex;
+Radio_Response_Randomization.tex;
+Resource_Types.tex;
+Script_Tutorial_Intro.tex;
+Scripting_Help.tex;
+Sequence_Advanced_Editor_Creation.tex;
+Sequence_Definition.tex;
+Sequence_Editor_Selection.tex;
+Sequence_Page_Maps.tex;
+Sequence_Simple_Editor_Creation.tex;
+Sequence_Top-Level.tex;
+Significant_Figures.tex;
+String_Response_Problem_Creation.tex;
+String_Response_Problems.tex;
+Tolerance.tex;
+Variable_Naming_Conventions.tex;
+Variable_Tutorial_A.tex;
+Variables_in_Scripts.tex;
+Variables_in_the_Answer_Block.tex;
+Variables_in_the_Text_Block.tex;
+</filenames>
+</fileglob>
+<file>
+<source>loncom/html/adm/help/fragmentLabels.gdbm</source>
+<target dist='default'>home/httpd/html/adm/help/fragmentLabels.gdbm</target>
+<categoryname>handler</categoryname>
+<description>
+A gdbm file containing a label->tex file hash.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/lonstatistics.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonstatistics.pm</target>
 <categoryname>handler</categoryname>
@@ -1255,6 +1514,33 @@ Handler to show statistics on solving LO
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/statistics/lonproblemstatistics.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonproblemstatistics.pm</target>
+<categoryname>handler</categoryname>
+<description>
+The module that generate the html for the Problem Statistcs web pages.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/statistics/lonproblemanalysis.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonproblemanalysis.pm</target>
+<categoryname>handler</categoryname>
+<description>
+The module that generate the html for the Problem Analysis web pages.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/statistics/lonstudentassessment.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonstudentassessment.pm</target>
+<categoryname>handler</categoryname>
+<description>
+The module that generate the html for the Student Assessment/Chart web pages.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/publisher/londiff.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/londiff.pm</target>
 <categoryname>handler</categoryname>
@@ -1325,7 +1611,8 @@ Handler to evaluate externally graded re
 <target dist='default'>home/httpd/lib/perl/Apache/loncapagrade.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler to evaluate externally graded responses.
+Holds results and defines
+tag handlers needed by externalresponse.pm
 </description>
 <status>works/unverified</status>
 </file>
@@ -1508,6 +1795,22 @@ Produces simple LectureOnline-like stude
 </description>
 </file>
 <file>
+<source>loncom/interface/lonhtmlcommon.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonhtmlcommon.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Contains a set of functions that generate html controls and data layouts
+</description>
+</file>
+<file>
+<source>loncom/interface/loncoursedata.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/loncoursedata.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Common functions for handling student course data (download and process)
+</description>
+</file>
+<file>
 <source>loncom/interface/loncommon.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/loncommon.pm</target>
 <categoryname>handler</categoryname>
@@ -1958,7 +2261,7 @@ loncom/build/pod2html.sh ../../rat/lonpa
 <target dist='default'>home/httpd/lib/perl/Apache/lonuserstate.pm</target>
 <categoryname>handler</categoryname>
 <description>
-compile course into binary data structure (in loncom/rat)
+compile course into binary data structure
 </description>
 <status>works/unverified</status>
 </file>
@@ -1998,7 +2301,7 @@ echo 'pod2html lonuserstate.pm'
 <target dist='default'>home/httpd/lib/perl/Apache/lontex.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler for tex files (somewhere in modules)
+Handler for tex files
 </description>
 <status>works/unverified</status>
 </file>
@@ -2661,7 +2964,7 @@ lonlogo_broken.mov
 <targetdir dist='default'>home/httpd/html/adm/lonIcons/</targetdir>
 <categoryname>graphic file</categoryname>
 <description>
-logos
+logos and general widget icons
 </description>
 <filenames>
 SMETE_white.gif;
@@ -2780,9 +3083,7 @@ zip_big.gif
 <targetdir dist='default'>home/httpd/html/adm/lonMisc/</targetdir>
 <categoryname>graphic file</categoryname>
 <description>
-Miscellaneous resources.  Respectively: button for catalog,
-button to set parameters in a page,
-button to do regrades, button to check on problem submissions,
+Miscellaneous resources.
 </description>
 <filenames>
 authorfeed.gif;
@@ -3151,7 +3452,7 @@ renders the HTML (including image maps)
 </targetdir>
 <categoryname>graphic file</categoryname>
 <description>
-icons used for the bookmark portion of the LON-CAPA user interface
+icons used for directory indexing and login screen
 </description>
 <filenames>
 a.gif;
@@ -3252,7 +3553,7 @@ world2.gif
 </targetdir>
 <categoryname>graphic file</categoryname>
 <description>
-icons used for directory indexing and login screen
+icons used for the bookmark portion of the LON-CAPA user interface
 </description>
 <filenames>
 folder_anim.gif;
@@ -3287,7 +3588,7 @@ ur_corner.gif
 </targetdir>
 <categoryname>interface file</categoryname>
 <description>
-associated with the frameset scheme of displaying bookmarks
+associated with the scheme of displaying bookmarks
 </description>
 <filenames>
 bookmarkmenu_toolbar.html;