--- loncom/homework/grades.pm	2003/08/07 14:33:15	1.131
+++ loncom/homework/grades.pm	2007/10/08 22:29:59	1.446
@@ -1,7 +1,7 @@
 # The LearningOnline Network with CAPA
 # The LON-CAPA Grading handler
 #
-# $Id: grades.pm,v 1.131 2003/08/07 14:33:15 bowersj2 Exp $
+# $Id: grades.pm,v 1.446 2007/10/08 22:29:59 banghart Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -25,16 +25,6 @@
 #
 # http://www.lon-capa.org/
 #
-# 2/9,2/13 Guy Albertelli
-# 6/8 Gerd Kortemeyer
-# 7/26 H.K. Ng
-# 8/20 Gerd Kortemeyer
-# Year 2002
-# June-August H.K. Ng
-# Year 2003
-# February, March H.K. Ng
-# July, H. K. Ng
-#
 
 package Apache::grades;
 use strict;
@@ -46,54 +36,55 @@ use Apache::lonhtmlcommon;
 use Apache::lonnavmaps;
 use Apache::lonhomework;
 use Apache::loncoursedata;
-use Apache::lonmsg qw(:user_normal_msg);
+use Apache::lonmsg();
 use Apache::Constants qw(:common);
+use Apache::lonlocal;
+use Apache::lonenc;
 use String::Similarity;
+use LONCAPA;
+
+use POSIX qw(floor);
+
 
-my %oldessays=();
 my %perm=();
+my %bubble_lines_per_response;     # no. bubble lines for each response.
+                                   # index is "symb.part_id"
+
 
 # ----- These first few routines are general use routines.----
 #
-# --- Retrieve the parts that matches stores_\d+ from the metadata file.---
+# --- Retrieve the parts from the metadata file.---
 sub getpartlist {
-    my ($url) = @_;
-    my @parts =();
-    my (@metakeys) = split(/,/,&Apache::lonnet::metadata($url,'keys'));
-    foreach my $key (@metakeys) {
-	if ( $key =~ m/stores_(\w+)_.*/) {
-	    push(@parts,$key);
+    my ($symb) = @_;
+
+    my $navmap   = Apache::lonnavmaps::navmap->new();
+    my $res      = $navmap->getBySymb($symb);
+    my $partlist = $res->parts();
+    my $url      = $res->src();
+    my @metakeys = split(/,/,&Apache::lonnet::metadata($url,'keys'));
+
+    my @stores;
+    foreach my $part (@{ $partlist }) {
+	foreach my $key (@metakeys) {
+	    if ($key =~ m/^stores_\Q$part\E_/) { push(@stores,$key); }
 	}
     }
-    return @parts;
+    return @stores;
 }
 
 # --- Get the symbolic name of a problem and the url
-sub get_symb_and_url {
-    my ($request) = @_;
-    (my $url=$ENV{'form.url'}) =~ s-^http://($ENV{'SERVER_NAME'}|$ENV{'HTTP_HOST'})--;
-    my $symb=($ENV{'form.symb'} ne '' ? $ENV{'form.symb'} : (&Apache::lonnet::symbread($url)));
-    if ($symb eq '') { $request->print("Unable to handle ambiguous references:$url:."); return ''; }
-    return ($symb,$url);
-}
-
-# --- Retrieve the fullname for a user. Return lastname, first middle ---
-# --- Generation is attached next to the lastname if it exists. ---
-sub get_fullname {
-    my ($uname,$udom) = @_;
-    my %name=&Apache::lonnet::get('environment', ['lastname','generation',
-						  'firstname','middlename'],
-                                  $udom,$uname);
-    my $fullname;
-    my ($tmp) = keys(%name);
-    if ($tmp !~ /^(con_lost|error|no_such_host)/i) {
-        $fullname = &Apache::loncoursedata::ProcessFullName
-            (@name{qw/lastname generation firstname middlename/});
-    } else {
-        &Apache::lonnet::logthis('grades.pm: no name data for '.$uname.
-                                 '@'.$udom.':'.$tmp);
+sub get_symb {
+    my ($request,$silent) = @_;
+    (my $url=$env{'form.url'}) =~ s-^http://($ENV{'SERVER_NAME'}|$ENV{'HTTP_HOST'})--;
+    my $symb=($env{'form.symb'} ne '' ? $env{'form.symb'} : (&Apache::lonnet::symbread($url)));
+    if ($symb eq '') { 
+	if (!$silent) {
+	    $request->print("Unable to handle ambiguous references:$url:.");
+	    return ();
+	}
     }
-    return $fullname;
+    &Apache::lonenc::check_decrypt(\$symb);
+    return ($symb);
 }
 
 #--- Format fullname, username:domain if different for display
@@ -101,91 +92,267 @@ sub get_fullname {
 sub nameUserString {
     my ($type,$fullname,$uname,$udom) = @_;
     if ($type eq 'header') {
-	return '<b>&nbsp;Fullname&nbsp;</b><font color="#999999">(Username)</font>&nbsp;';
+	return '<b>&nbsp;Fullname&nbsp;</b><span class="LC_internal_info">(Username)</span>';
     } else {
-	return '&nbsp;'.$fullname.'<font color="#999999">&nbsp;('.$uname.
-	    ($ENV{'user.domain'} eq $udom ? '' : ' ('.$udom.')').')</font>';
+	return '&nbsp;'.$fullname.'<span class="LC_internal_info">&nbsp;('.$uname.
+	    ($env{'user.domain'} eq $udom ? '' : ' ('.$udom.')').')</span>';
     }
 }
 
 #--- Get the partlist and the response type for a given problem. ---
 #--- Indicate if a response type is coded handgraded or not. ---
 sub response_type {
-    my ($url,$symb) = shift;
-    $symb=($ENV{'form.symb'} ne '' ? $ENV{'form.symb'} : (&Apache::lonnet::symbread($url))) if ($symb eq '');
-    my $allkeys = &Apache::lonnet::metadata($url,'keys');
-    my %seen = ();
-    my (@partlist,%handgrade);
-    foreach (split(/,/,&Apache::lonnet::metadata($url,'packages'))) {
-	if (/^\w+response_\w+.*/) {
-	    my ($responsetype,$part) = split(/_/,$_,2);
-	    my ($partid,$respid) = split(/_/,$part);
-	    $responsetype =~ s/response$//; # make it compatible w/ navmaps - should move to that!!
-	    my ($value) = &Apache::lonnet::EXT('resource.'.$part.'.handgrade',$symb);
-	    $handgrade{$part} = $responsetype.':'.($value eq 'yes' ? 'yes' : 'no'); 
-	    next if ($seen{$partid} > 0);
-	    $seen{$partid}++;
-	    push @partlist,$partid;
-	}
+    my ($symb) = shift;
+
+    my $navmap = Apache::lonnavmaps::navmap->new();
+    my $res = $navmap->getBySymb($symb);
+    my $partlist = $res->parts();
+    my %vPart = 
+	map { $_ => 1 } (&Apache::loncommon::get_env_multiple('form.vPart'));
+    my (%response_types,%handgrade);
+    foreach my $part (@{ $partlist }) {
+	next if (%vPart && !exists($vPart{$part}));
+
+	my @types = $res->responseType($part);
+	my @ids = $res->responseIds($part);
+	for (my $i=0; $i < scalar(@ids); $i++) {
+	    $response_types{$part}{$ids[$i]} = $types[$i];
+	    $handgrade{$part.'_'.$ids[$i]} = 
+		&Apache::lonnet::EXT('resource.'.$part.'_'.$ids[$i].
+				     '.handgrade',$symb);
+	}
+    }
+    return ($partlist,\%handgrade,\%response_types);
+}
+
+sub flatten_responseType {
+    my ($responseType) = @_;
+    my @part_response_id =
+	map { 
+	    my $part = $_;
+	    map {
+		[$part,$_]
+		} sort(keys(%{ $responseType->{$part} }));
+	} sort(keys(%$responseType));
+    return @part_response_id;
+}
+
+sub get_display_part {
+    my ($partID,$symb)=@_;
+    my $display=&Apache::lonnet::EXT('resource.'.$partID.'.display',$symb);
+    if (defined($display) and $display ne '') {
+	$display.= " (<span class=\"LC_internal_info\">id $partID</span>)";
+    } else {
+	$display=$partID;
     }
-    return \@partlist,\%handgrade;
+    return $display;
 }
 
 #--- Show resource title
 #--- and parts and response type
 sub showResourceInfo {
-    my ($url,$probTitle) = @_;
-    my $result ='<table border="0">'.
-	'<tr><td colspan=3><font size=+1><b>Current Resource: </b>'.$probTitle.'</font></td></tr>'."\n";
-    my ($partlist,$handgrade) = &response_type($url);
+    my ($symb,$probTitle,$checkboxes) = @_;
+    my $col=3;
+    if ($checkboxes) { $col=4; }
+    my $result = '<h3>'.&mt('Current Resource').': '.$probTitle.'</h3>'."\n";
+    $result .='<table border="0">';
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
     my %resptype = ();
     my $hdgrade='no';
-    for (sort keys(%$handgrade)) {
-	my ($responsetype,$handgrade)=split(/:/,$$handgrade{$_});
-	my $partID = (split(/_/))[0];
-	$resptype{$partID} = $responsetype;
-	$hdgrade = $handgrade if ($handgrade eq 'yes');
-	$result.='<tr><td><b>Part </b>'.$partID.'</td>'.
-	    '<td><b>Type: </b>'.$responsetype.'</td></tr>';
+    my %partsseen;
+    foreach my $partID (sort keys(%$responseType)) {
+	foreach my $resID (sort keys(%{ $responseType->{$partID} })) {
+	    my $handgrade=$$handgrade{$partID.'_'.$resID};
+	    my $responsetype = $responseType->{$partID}->{$resID};
+	    $hdgrade = $handgrade if ($handgrade eq 'yes');
+	    $result.='<tr>';
+	    if ($checkboxes) {
+		if (exists($partsseen{$partID})) {
+		    $result.="<td>&nbsp;</td>";
+		} else {
+		    $result.="<td><input type='checkbox' name='vPart' value='$partID' checked='checked' /></td>";
+		}
+		$partsseen{$partID}=1;
+	    }
+	    my $display_part=&get_display_part($partID,$symb);
+	    $result.='<td><b>Part: </b>'.$display_part.' <span class="LC_internal_info">'.
+		$resID.'</span></td>'.
+		'<td><b>Type: </b>'.$responsetype.'</td></tr>';
 #	    '<td><b>Handgrade: </b>'.$handgrade.'</td></tr>';
+	}
     }
     $result.='</table>'."\n";
-    return $result,\%resptype,$hdgrade,$partlist,$handgrade;
+    return $result,$responseType,$hdgrade,$partlist,$handgrade;
+}
+
+sub reset_caches {
+    &reset_analyze_cache();
+    &reset_perm();
+}
+
+{
+    my %analyze_cache;
+
+    sub reset_analyze_cache {
+	undef(%analyze_cache);
+    }
+
+    sub get_analyze {
+	my ($symb,$uname,$udom)=@_;
+	my $key = "$symb\0$uname\0$udom";
+	return $analyze_cache{$key} if (exists($analyze_cache{$key}));
+
+	my (undef,undef,$url)=&Apache::lonnet::decode_symb($symb);
+	$url=&Apache::lonnet::clutter($url);
+	my $subresult=&Apache::lonnet::ssi($url,
+					   ('grade_target' => 'analyze'),
+					   ('grade_domain' => $udom),
+					   ('grade_symb' => $symb),
+					   ('grade_courseid' => 
+					    $env{'request.course.id'}),
+					   ('grade_username' => $uname));
+	(undef,$subresult)=split(/_HASH_REF__/,$subresult,2);
+	my %analyze=&Apache::lonnet::str2hash($subresult);
+	return $analyze_cache{$key} = \%analyze;
+    }
+
+    sub get_order {
+	my ($partid,$respid,$symb,$uname,$udom)=@_;
+	my $analyze = &get_analyze($symb,$uname,$udom);
+	return $analyze->{"$partid.$respid.shown"};
+    }
+
+    sub get_radiobutton_correct_foil {
+	my ($partid,$respid,$symb,$uname,$udom)=@_;
+	my $analyze = &get_analyze($symb,$uname,$udom);
+	foreach my $foil (@{&get_order($partid,$respid,$symb,$uname,$udom)}) {
+	    if ($analyze->{"$partid.$respid.foil.value.$foil"} eq 'true') {
+		return $foil;
+	    }
+	}
+    }
 }
 
 #--- Clean response type for display
-#--- Currently filters option response type only.
+#--- Currently filters option/rank/radiobutton/match/essay/Task
+#        response types only.
 sub cleanRecord {
-    my ($answer,$response,$symb) = @_;
-    if ($response eq 'option') {
-	my (@IDs,@ans);
-	foreach (split(/\&/,&Apache::lonnet::unescape($answer))) {
-	    my ($optionID,$ans) = split(/=/);
-	    push @IDs,$optionID.'</font>';
-	    push @ans,$ans;
+    my ($answer,$response,$symb,$partid,$respid,$record,$order,$version,
+	$uname,$udom) = @_;
+    my $grayFont = '<span class="LC_internal_info">';
+    if ($response =~ /^(option|rank)$/) {
+	my %answer=&Apache::lonnet::str2hash($answer);
+	my %grading=&Apache::lonnet::str2hash($record->{$version."resource.$partid.$respid.submissiongrading"});
+	my ($toprow,$bottomrow);
+	foreach my $foil (@$order) {
+	    if ($grading{$foil} == 1) {
+		$toprow.='<td><b>'.$answer{$foil}.'&nbsp;</b></td>';
+	    } else {
+		$toprow.='<td><i>'.$answer{$foil}.'&nbsp;</i></td>';
+	    }
+	    $bottomrow.='<td>'.$grayFont.$foil.'</span>&nbsp;</td>';
 	}
-	my $grayFont = '<font color="#999999">';
 	return '<blockquote><table border="1">'.
-	    '<tr valign="top"><td>Answer</td><td>'.
-	    (join '</td><td>',@ans).'</td></tr>'.
-	    '<tr valign="top"><td>'.$grayFont.'Option ID</font></td><td>'.$grayFont.
-	    (join '</td><td>'.$grayFont,@IDs).'</font></td></tr>'.
-	    '</table></blockquote>';
-    }
-    if ($response eq 'essay') {
-	if (! exists ($ENV{'form.'.$symb})) {
+	    '<tr valign="top"><td>Answer</td>'.$toprow.'</tr>'.
+	    '<tr valign="top"><td>'.$grayFont.'Option ID</span></td>'.
+	    $grayFont.$bottomrow.'</tr>'.'</table></blockquote>';
+    } elsif ($response eq 'match') {
+	my %answer=&Apache::lonnet::str2hash($answer);
+	my %grading=&Apache::lonnet::str2hash($record->{$version."resource.$partid.$respid.submissiongrading"});
+	my @items=&Apache::lonnet::str2array($record->{$version."resource.$partid.$respid.submissionitems"});
+	my ($toprow,$middlerow,$bottomrow);
+	foreach my $foil (@$order) {
+	    my $item=shift(@items);
+	    if ($grading{$foil} == 1) {
+		$toprow.='<td><b>'.$item.'&nbsp;</b></td>';
+		$middlerow.='<td><b>'.$grayFont.$answer{$foil}.'&nbsp;</span></b></td>';
+	    } else {
+		$toprow.='<td><i>'.$item.'&nbsp;</i></td>';
+		$middlerow.='<td><i>'.$grayFont.$answer{$foil}.'&nbsp;</span></i></td>';
+	    }
+	    $bottomrow.='<td>'.$grayFont.$foil.'</span>&nbsp;</td>';
+	}
+	return '<blockquote><table border="1">'.
+	    '<tr valign="top"><td>Answer</td>'.$toprow.'</tr>'.
+	    '<tr valign="top"><td>'.$grayFont.'Item ID</span></td>'.
+	    $middlerow.'</tr>'.
+	    '<tr valign="top"><td>'.$grayFont.'Option ID</span></td>'.
+	    $bottomrow.'</tr>'.'</table></blockquote>';
+    } elsif ($response eq 'radiobutton') {
+	my %answer=&Apache::lonnet::str2hash($answer);
+	my ($toprow,$bottomrow);
+	my $correct = 
+	    &get_radiobutton_correct_foil($partid,$respid,$symb,$uname,$udom);
+	foreach my $foil (@$order) {
+	    if (exists($answer{$foil})) {
+		if ($foil eq $correct) {
+		    $toprow.='<td><b>true</b></td>';
+		} else {
+		    $toprow.='<td><i>true</i></td>';
+		}
+	    } else {
+		$toprow.='<td>false</td>';
+	    }
+	    $bottomrow.='<td>'.$grayFont.$foil.'</span>&nbsp;</td>';
+	}
+	return '<blockquote><table border="1">'.
+	    '<tr valign="top"><td>Answer</td>'.$toprow.'</tr>'.
+	    '<tr valign="top"><td>'.$grayFont.'Option ID</span></td>'.
+	    $grayFont.$bottomrow.'</tr>'.'</table></blockquote>';
+    } elsif ($response eq 'essay') {
+	if (! exists ($env{'form.'.$symb})) {
 	    my (%keyhash) = &Apache::lonnet::dump('nohist_handgrade',
-						  $ENV{'course.'.$ENV{'request.course.id'}.'.domain'},
-						  $ENV{'course.'.$ENV{'request.course.id'}.'.num'});
+						  $env{'course.'.$env{'request.course.id'}.'.domain'},
+						  $env{'course.'.$env{'request.course.id'}.'.num'});
 
-	    my $loginuser = $ENV{'user.name'}.':'.$ENV{'user.domain'};
-	    $ENV{'form.keywords'} = $keyhash{$symb.'_keywords'} ne '' ? $keyhash{$symb.'_keywords'} : '';
-	    $ENV{'form.kwclr'}    = $keyhash{$loginuser.'_kwclr'} ne '' ? $keyhash{$loginuser.'_kwclr'} : 'red';
-	    $ENV{'form.kwsize'}   = $keyhash{$loginuser.'_kwsize'} ne '' ? $keyhash{$loginuser.'_kwsize'} : '0';
-	    $ENV{'form.kwstyle'}  = $keyhash{$loginuser.'_kwstyle'} ne '' ? $keyhash{$loginuser.'_kwstyle'} : '';
-	    $ENV{'form.'.$symb} = 1; # so that we don't have to read it from disk for multiple sub of the same prob.
-	}
-	return '<br /><br /><blockquote>'.&keywords_highlight($answer).'</blockquote>';
+	    my $loginuser = $env{'user.name'}.':'.$env{'user.domain'};
+	    $env{'form.keywords'} = $keyhash{$symb.'_keywords'} ne '' ? $keyhash{$symb.'_keywords'} : '';
+	    $env{'form.kwclr'}    = $keyhash{$loginuser.'_kwclr'} ne '' ? $keyhash{$loginuser.'_kwclr'} : 'red';
+	    $env{'form.kwsize'}   = $keyhash{$loginuser.'_kwsize'} ne '' ? $keyhash{$loginuser.'_kwsize'} : '0';
+	    $env{'form.kwstyle'}  = $keyhash{$loginuser.'_kwstyle'} ne '' ? $keyhash{$loginuser.'_kwstyle'} : '';
+	    $env{'form.'.$symb} = 1; # so that we don't have to read it from disk for multiple sub of the same prob.
+	}
+	$answer =~ s-\n-<br />-g;
+	return '<br /><br /><blockquote><tt>'.&keywords_highlight($answer).'</tt></blockquote>';
+    } elsif ( $response eq 'organic') {
+	my $result='Smile representation: "<tt>'.$answer.'</tt>"';
+	my $jme=$record->{$version."resource.$partid.$respid.molecule"};
+	$result.=&Apache::chemresponse::jme_img($jme,$answer,400);
+	return $result;
+    } elsif ( $response eq 'Task') {
+	if ( $answer eq 'SUBMITTED') {
+	    my $files = $record->{$version."resource.$respid.$partid.bridgetask.portfiles"};
+	    my $result = &Apache::bridgetask::file_list($files,$uname,$udom);
+	    return $result;
+	} elsif ( grep(/^\Q$version\E.*?\.instance$/, keys(%{$record})) ) {
+	    my @matches = grep(/^\Q$version\E.*?\.instance$/,
+			       keys(%{$record}));
+	    return join('<br />',($version,@matches));
+			       
+			       
+	} else {
+	    my $result =
+		'<p>'
+		.&mt('Overall result: [_1]',
+		     $record->{$version."resource.$respid.$partid.status"})
+		.'</p>';
+	    
+	    $result .= '<ul>';
+	    my @grade = grep(/^\Q${version}resource.$respid.$partid.\E[^.]*[.]status$/,
+			     keys(%{$record}));
+	    foreach my $grade (sort(@grade)) {
+		my ($dim) = ($grade =~/[.]([^.]+)[.]status$/);
+		$result.= '<li>'.&mt("Dimension: [_1], status [_2] ",
+				     $dim, $record->{$grade}).
+			  '</li>';
+	    }
+	    $result.='</ul>';
+	    return $result;
+	}
+    } elsif ( $response =~ m/(?:numerical|formula)/) {
+	$answer = 
+	    &Apache::loncommon::format_previous_attempt_value('submission',
+							      $answer);
     }
     return $answer;
 }
@@ -218,7 +385,8 @@ sub commonJSfunctions {
 		}
 	    }
 	} else {
-	    if (selectOne.selected) return selectOne.value;
+            // only one value it must be the selected one
+	    return selectOne.value;
 	}
     }
 </script>
@@ -229,34 +397,53 @@ COMMONJSFUNCTIONS
 #--- section, ids and fullnames for each user.
 sub getclasslist {
     my ($getsec,$filterlist) = @_;
-    $getsec = $getsec eq '' ? 'all' : $getsec;
+    my @getsec;
+    my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
+    if (!ref($getsec)) {
+	if ($getsec ne '' && $getsec ne 'all') {
+	    @getsec=($getsec);
+	}
+    } else {
+	@getsec=@{$getsec};
+    }
+    if (grep(/^all$/,@getsec)) { undef(@getsec); }
+
     my $classlist=&Apache::loncoursedata::get_classlist();
     # Bail out if we were unable to get the classlist
     return if (! defined($classlist));
     #
     my %sections;
     my %fullnames;
-    foreach (keys(%$classlist)) {
-        # the following undefs are for 'domain', and 'username' respectively.
-	my (undef,undef,$end,$start,$id,$section,$fullname,$status)=
-            @{$classlist->{$_}};
+    foreach my $student (keys(%$classlist)) {
+        my $end      = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_END()];
+        my $start    = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_START()];
+        my $id       = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_ID()];
+        my $section  = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_SECTION()];
+        my $fullname = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_FULLNAME()];
+        my $status   = 
+            $classlist->{$student}->[&Apache::loncoursedata::CL_STATUS()];
 	# filter students according to status selected
-	if ($filterlist && $ENV{'form.Status'} ne 'Any') {
-	    if ($ENV{'form.Status'} ne $status) {
-		delete ($classlist->{$_});
+	if ($filterlist && (!($stu_status =~ /Any/))) {
+	    if (!($stu_status =~ $status)) {
+		delete ($classlist->{$student});
 		next;
 	    }
 	}
-	$section = ($section ne '' ? $section : 'no');
+	$section = ($section ne '' ? $section : 'none');
 	if (&canview($section)) {
-	    if ($getsec eq 'all' || $getsec eq $section) {
+	    if (!@getsec || grep(/^\Q$section\E$/,@getsec)) {
 		$sections{$section}++;
-		$fullnames{$_}=$fullname;
+		$fullnames{$student}=$fullname;
 	    } else {
-		delete($classlist->{$_});
+		delete($classlist->{$student});
 	    }
 	} else {
-	    delete($classlist->{$_});
+	    delete($classlist->{$student});
 	}
     }
     my %seen = ();
@@ -306,8 +493,8 @@ sub canview {
 
 #--- Retrieve the grade status of a student for all the parts
 sub student_gradeStatus {
-    my ($url,$symb,$udom,$uname,$partlist) = @_;
-    my %record     = &Apache::lonnet::restore($symb,$ENV{'request.course.id'},$udom,$uname);
+    my ($symb,$udom,$uname,$partlist) = @_;
+    my %record     = &Apache::lonnet::restore($symb,$env{'request.course.id'},$udom,$uname);
     my %partstatus = ();
     foreach (@$partlist) {
 	my ($status,undef)   = split(/_/,$record{"resource.$_.solved"},2);
@@ -323,7 +510,8 @@ sub student_gradeStatus {
 # Use by verifyscript and viewgrades
 # Shows a student's view of problem and submission
 sub jscriptNform {
-    my ($url,$symb) = @_;
+    my ($symb) = @_;
+    my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
     my $jscript='<script type="text/javascript" language="javascript">'."\n".
 	'    function viewOneStudent(user,domain) {'."\n".
 	'	document.onestudent.student.value = user;'."\n".
@@ -332,11 +520,10 @@ sub jscriptNform {
 	'    }'."\n".
 	'</script>'."\n";
     $jscript.= '<form action="/adm/grades" method="post" name="onestudent">'."\n".
-	'<input type="hidden" name="symb"    value="'.$symb.'" />'."\n".
-	'<input type="hidden" name="url"     value="'.$url.'" />'."\n".
-	'<input type="hidden" name="saveState" value="'.$ENV{'form.saveState'}.'" />'."\n".
-	'<input type="hidden" name="probTitle" value="'.$ENV{'form.probTitle'}.'" />'."\n".
-	'<input type="hidden" name="Status"  value="'.$ENV{'form.Status'}.'" />'."\n".
+	'<input type="hidden" name="symb"    value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+	'<input type="hidden" name="saveState" value="'.$env{'form.saveState'}.'" />'."\n".
+	'<input type="hidden" name="probTitle" value="'.$env{'form.probTitle'}.'" />'."\n".
+	'<input type="hidden" name="Status"  value="'.$stu_status.'" />'."\n".
 	'<input type="hidden" name="command" value="submission" />'."\n".
 	'<input type="hidden" name="student" value="" />'."\n".
 	'<input type="hidden" name="userdom" value="" />'."\n".
@@ -344,6 +531,33 @@ sub jscriptNform {
     return $jscript;
 }
 
+# Given the score (as a number [0-1] and the weight) what is the final
+# point value? This function will round to the nearest tenth, third,
+# or quarter if one of those is within the tolerance of .00001.
+sub compute_points {
+    my ($score, $weight) = @_;
+    
+    my $tolerance = .00001;
+    my $points = $score * $weight;
+
+    # Check for nearness to 1/x.
+    my $check_for_nearness = sub {
+        my ($factor) = @_;
+        my $num = ($points * $factor) + $tolerance;
+        my $floored_num = floor($num);
+        if ($num - $floored_num < 2 * $tolerance * $factor) {
+            return $floored_num / $factor;
+        }
+        return $points;
+    };
+
+    $points = $check_for_nearness->(10);
+    $points = $check_for_nearness->(3);
+    $points = $check_for_nearness->(4);
+    
+    return $points;
+}
+
 #------------------ End of general use routines --------------------
 
 #
@@ -351,12 +565,16 @@ sub jscriptNform {
 #
 
 sub most_similar {
-    my ($uname,$udom,$uessay)=@_;
+    my ($uname,$udom,$uessay,$old_essays)=@_;
 
 # ignore spaces and punctuation
 
     $uessay=~s/\W+/ /gs;
 
+# ignore empty submissions (occuring when only files are sent)
+
+    unless ($uessay=~/\w+/) { return ''; }
+
 # these will be returned. Do not care if not at least 50 percent similar
     my $limit=0.6;
     my $sname='';
@@ -364,23 +582,22 @@ sub most_similar {
     my $scrsid='';
     my $sessay='';
 # go through all essays ...
-    foreach my $tkey (keys %oldessays) {
-	my ($tname,$tdom,$tcrsid)=split(/\./,$tkey);
+    foreach my $tkey (keys(%$old_essays)) {
+	my ($tname,$tdom,$tcrsid)=map {&unescape($_)} (split(/\./,$tkey));
 # ... except the same student
-        if (($tname ne $uname) || ($tdom ne $udom)) {
-	    my $tessay=$oldessays{$tkey};
-            $tessay=~s/\W+/ /gs;
+        next if (($tname eq $uname) && ($tdom eq $udom));
+	my $tessay=$old_essays->{$tkey};
+	$tessay=~s/\W+/ /gs;
 # String similarity gives up if not even limit
-            my $tsimilar=&String::Similarity::similarity($uessay,$tessay,$limit);
+	my $tsimilar=&String::Similarity::similarity($uessay,$tessay,$limit);
 # Found one
-            if ($tsimilar>$limit) {
-		$limit=$tsimilar;
-                $sname=$tname;
-                $sdom=$tdom;
-                $scrsid=$tcrsid;
-                $sessay=$oldessays{$tkey};
-            }
-        } 
+	if ($tsimilar>$limit) {
+	    $limit=$tsimilar;
+	    $sname=$tname;
+	    $sdom=$tdom;
+	    $scrsid=$tcrsid;
+	    $sessay=$old_essays->{$tkey};
+	}
     }
     if ($limit>0.6) {
        return ($sname,$sdom,$scrsid,$sessay,$limit);
@@ -397,51 +614,66 @@ sub most_similar {
 sub verifyreceipt {
     my $request  = shift;
 
-    my $courseid = $ENV{'request.course.id'};
-    my $receipt  = unpack("%32C*",$Apache::lonnet::perlvar{'lonHostID'}).'-'.
-	$ENV{'form.receipt'};
+    my $courseid = $env{'request.course.id'};
+    my $receipt  = &Apache::lonnet::recprefix($courseid).'-'.
+	$env{'form.receipt'};
     $receipt     =~ s/[^\-\d]//g;
-    my $url      = $ENV{'form.url'};
-    my $symb     = $ENV{'form.symb'};
-    unless ($symb) {
-	$symb    = &Apache::lonnet::symbread($url);
-    }
+    my ($symb)   = &get_symb($request);
 
-    my $title.='<h3><font color="#339933">Verifying Submission Receipt '.
-	$receipt.'</h3></font>'."\n".
-	'<font size=+1><b>Resource: </b>'.$ENV{'form.probTitle'}.'</font><br><br>'."\n";
+    my $title.='<h3><span class="LC_info">Verifying Submission Receipt '.
+	$receipt.'</h3></span>'."\n".
+	'<h4><b>Resource: </b>'.$env{'form.probTitle'}.'</h4><br /><br />'."\n";
 
     my ($string,$contents,$matches) = ('','',0);
     my (undef,undef,$fullname) = &getclasslist('all','0');
-
-    foreach (sort {lc($$fullname{$a}) cmp lc($$fullname{$b}) } keys %$fullname) {
+    
+    my $receiptparts=0;
+    if ($env{"course.$courseid.receiptalg"} eq 'receipt2' ||
+	$env{"course.$courseid.receiptalg"} eq 'receipt3') { $receiptparts=1; }
+    my $parts=['0'];
+    if ($receiptparts) { ($parts)=&response_type($symb); }
+    foreach (sort 
+	     {
+		 if (lc($$fullname{$a}) ne lc($$fullname{$b})) {
+		     return (lc($$fullname{$a}) cmp lc($$fullname{$b}));
+		 }
+		 return $a cmp $b;
+	     } (keys(%$fullname))) {
 	my ($uname,$udom)=split(/\:/);
-	if ($receipt eq 
-	    &Apache::lonnet::ireceipt($uname,$udom,$courseid,$symb)) {
-	    $contents.='<tr bgcolor="#ffffe6"><td>&nbsp;'."\n".
-		'<a href="javascript:viewOneStudent(\''.$uname.'\',\''.$udom.
-		'\')"; TARGET=_self>'.$$fullname{$_}.'</a>&nbsp;</td>'."\n".
-		'<td>&nbsp;'.$uname.'&nbsp;</td>'.
-		'<td>&nbsp;'.$udom.'&nbsp;</td></tr>'."\n";
-	    
-	    $matches++;
+	foreach my $part (@$parts) {
+	    if ($receipt eq &Apache::lonnet::ireceipt($uname,$udom,$courseid,$symb,$part)) {
+		$contents.='<tr bgcolor="#ffffe6"><td>&nbsp;'."\n".
+		    '<a href="javascript:viewOneStudent(\''.$uname.'\',\''.$udom.
+		    '\');" target="_self">'.$$fullname{$_}.'</a>&nbsp;</td>'."\n".
+		    '<td>&nbsp;'.$uname.'&nbsp;</td>'.
+		    '<td>&nbsp;'.$udom.'&nbsp;</td>';
+		if ($receiptparts) {
+		    $contents.='<td>&nbsp;'.$part.'&nbsp;</td>';
+		}
+		$contents.='</tr>'."\n";
+		
+		$matches++;
+	    }
 	}
     }
     if ($matches == 0) {
 	$string = $title.'No match found for the above receipt.';
     } else {
-	$string = &jscriptNform($url,$symb).$title.
+	$string = &jscriptNform($symb).$title.
 	    'The above receipt matches the following student'.
 	    ($matches <= 1 ? '.' : 's.')."\n".
 	    '<table border="0"><tr><td bgcolor="#777777">'."\n".
 	    '<table border="0"><tr bgcolor="#e6ffff">'."\n".
 	    '<td><b>&nbsp;Fullname&nbsp;</b></td>'."\n".
 	    '<td><b>&nbsp;Username&nbsp;</b></td>'."\n".
-	    '<td><b>&nbsp;Domain&nbsp;</b></td></tr>'."\n".
-	    $contents.
+	    '<td><b>&nbsp;Domain&nbsp;</b></td>';
+	if ($receiptparts) {
+	    $string.='<td>&nbsp;Problem Part&nbsp;</td>';
+	}
+	$string.='</tr>'."\n".$contents.
 	    '</table></td></tr></table>'."\n";
     }
-    return $string.&show_grading_menu_form($symb,$url);
+    return $string.&show_grading_menu_form($symb);
 }
 
 #--- This is called by a number of programs.
@@ -451,21 +683,20 @@ sub verifyreceipt {
 sub listStudents {
     my ($request) = shift;
 
-    my ($symb,$url) = &get_symb_and_url($request);
-    my $cdom      = $ENV{"course.$ENV{'request.course.id'}.domain"};
-    my $cnum      = $ENV{"course.$ENV{'request.course.id'}.num"};
-    my $getsec    = $ENV{'form.section'} eq '' ? 'all' : $ENV{'form.section'};
-    my $submitonly= $ENV{'form.submitonly'} eq '' ? 'all' : $ENV{'form.submitonly'};
-
-    my $viewgrade = $ENV{'form.showgrading'} eq 'yes' ? 'View/Grade/Regrade' : 'View';
-    $ENV{'form.probTitle'} = $ENV{'form.probTitle'} eq '' ? 
-	&Apache::lonnet::gettitle($symb) : $ENV{'form.probTitle'};
+    my ($symb) = &get_symb($request);
+    my $cdom      = $env{"course.$env{'request.course.id'}.domain"};
+    my $cnum      = $env{"course.$env{'request.course.id'}.num"};
+    my $getsec    = $env{'form.section'} eq '' ? 'all' : $env{'form.section'};
+    my $submitonly= $env{'form.submitonly'} eq '' ? 'all' : $env{'form.submitonly'};
+
+    my $viewgrade = $env{'form.showgrading'} eq 'yes' ? 'View/Grade/Regrade' : 'View';
+    $env{'form.probTitle'} = $env{'form.probTitle'} eq '' ? 
+	&Apache::lonnet::gettitle($symb) : $env{'form.probTitle'};
 
-    my $result='<h3><font color="#339933">&nbsp;'.$viewgrade.
-	' Submissions for a Student or a Group of Students</font></h3>';
+    my $result='<h3><span class="LC_info">&nbsp;'.$viewgrade.
+	' Submissions for a Student or a Group of Students</span></h3>';
 
-    my ($table,undef,$hdgrade,$partlist,$handgrade) = &showResourceInfo($url,$ENV{'form.probTitle'});
-    $result.=$table;
+    my ($table,undef,$hdgrade,$partlist,$handgrade) = &showResourceInfo($symb,$env{'form.probTitle'},($env{'form.showgrading'} eq 'yes'));
 
     $request->print(<<LISTJAVASCRIPT);
 <script type="text/javascript" language="javascript">
@@ -503,36 +734,44 @@ LISTJAVASCRIPT
     &commonJSfunctions($request);
     $request->print($result);
 
-    my $checkhdgrade = ($ENV{'form.handgrade'} eq 'yes' && scalar(@$partlist) > 1 ) ? 'checked' : '';
-    my $checklastsub = $checkhdgrade eq '' ? 'checked' : '';
-    my $gradeTable='<form action="/adm/grades" method="post" name="gradesub">'."\n".
-	'&nbsp;<b>View Problem Text: </b><input type="radio" name="vProb" value="no" checked /> no '."\n".
-	'<input type="radio" name="vProb" value="yes" /> one student '."\n".
-	'<input type="radio" name="vProb" value="all" /> all students <br />'."\n".
+    my $checkhdgrade = ($env{'form.handgrade'} eq 'yes' && scalar(@$partlist) > 1 ) ? 'checked="checked"' : '';
+    my $checklastsub = $checkhdgrade eq '' ? 'checked="checked"' : '';
+    my $gradeTable='<form action="/adm/grades" method="post" name="gradesub">'.
+	"\n".$table.
+	'&nbsp;<b>View Problem Text: </b><label><input type="radio" name="vProb" value="no" checked="checked" /> no </label>'."\n".
+	'<label><input type="radio" name="vProb" value="yes" /> one student </label>'."\n".
+	'<label><input type="radio" name="vProb" value="all" /> all students </label><br />'."\n".
+	'&nbsp;<b>View Answer: </b><label><input type="radio" name="vAns" value="no"  /> no </label>'."\n".
+	'<label><input type="radio" name="vAns" value="yes" /> one student </label>'."\n".
+	'<label><input type="radio" name="vAns" value="all" checked="checked" /> all students </label><br />'."\n".
 	'&nbsp;<b>Submissions: </b>'."\n";
-    if ($ENV{'form.handgrade'} eq 'yes' && scalar(@$partlist) > 1) {
-	$gradeTable.='<input type="radio" name="lastSub" value="hdgrade" '.$checkhdgrade.' /> essay part only'."\n";
+    if ($env{'form.handgrade'} eq 'yes' && scalar(@$partlist) > 1) {
+	$gradeTable.='<label><input type="radio" name="lastSub" value="hdgrade" '.$checkhdgrade.' /> essay part only </label>'."\n";
     }
-
-    my $saveStatus = $ENV{'form.Status'} eq '' ? 'Active' : $ENV{'form.Status'};
-    $ENV{'form.Status'} = $saveStatus;
-
-    $gradeTable.='<input type="radio" name="lastSub" value="lastonly" '.$checklastsub.' /> last sub only'."\n".
-	'<input type="radio" name="lastSub" value="last" /> last sub & parts info'."\n".
-	'<input type="radio" name="lastSub" value="datesub" /> by dates and submissions'."\n".
-	'<input type="radio" name="lastSub" value="all" /> all details'."\n".
-	'<input type="hidden" name="section"     value="'.$getsec.'" />'."\n".
+    my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
+    my $saveStatus = $stu_status eq '' ? 'Active' : $stu_status;
+    $env{'form.Status'} = $saveStatus;
+    $gradeTable.='<label><input type="radio" name="lastSub" value="lastonly" '.$checklastsub.' /> last submission only </label>'."\n".
+	'<label><input type="radio" name="lastSub" value="last" /> last submission & parts info </label>'."\n".
+	'<label><input type="radio" name="lastSub" value="datesub" /> by dates and submissions </label>'."\n".
+	'<label><input type="radio" name="lastSub" value="all" /> all details</label><br />'."\n".
+        '&nbsp;<b>Grading Increments:</b> <select name="increment">'.
+        '<option value="1">Whole Points</option>'.
+        '<option value=".5">Half Points</option>'.
+        '<option value=".25">Quarter Points</option>'.
+        '<option value=".1">Tenths of a Point</option>'.
+        '</select>'.
+        &build_section_inputs().
 	'<input type="hidden" name="submitonly"  value="'.$submitonly.'" />'."\n".
-	'<input type="hidden" name="handgrade"   value="'.$ENV{'form.handgrade'}.'" /><br />'."\n".
-	'<input type="hidden" name="showgrading" value="'.$ENV{'form.showgrading'}.'" /><br />'."\n".
-	'<input type="hidden" name="saveState"   value="'.$ENV{'form.saveState'}.'" />'."\n".
-	'<input type="hidden" name="probTitle"   value="'.$ENV{'form.probTitle'}.'" />'."\n".
-	'<input type="hidden" name="url"  value="'.$url.'" />'."\n".
-	'<input type="hidden" name="symb" value="'.$symb.'" />'."\n".
+	'<input type="hidden" name="handgrade"   value="'.$env{'form.handgrade'}.'" /><br />'."\n".
+	'<input type="hidden" name="showgrading" value="'.$env{'form.showgrading'}.'" /><br />'."\n".
+	'<input type="hidden" name="saveState"   value="'.$env{'form.saveState'}.'" />'."\n".
+	'<input type="hidden" name="probTitle"   value="'.$env{'form.probTitle'}.'" />'."\n".
+	'<input type="hidden" name="symb" value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
 	'<input type="hidden" name="saveStatusOld" value="'.$saveStatus.'" />'."\n";
 
-    if (exists($ENV{'form.gradingMenu'}) && exists($ENV{'form.Status'})) {
-	$gradeTable.='<input type="hidden" name="Status"   value="'.$ENV{'form.Status'}.'" />'."\n";
+    if (exists($env{'form.gradingMenu'}) && exists($env{'form.Status'})) {
+	$gradeTable.='<input type="hidden" name="Status"   value="'.$stu_status.'" />'."\n";
     } else {
 	$gradeTable.='<b>Student Status:</b> '.
 	    &Apache::lonhtmlcommon::StatusOptions($saveStatus,undef,1,'javascript:reLoadList(this.form);').'<br />';
@@ -541,21 +780,31 @@ LISTJAVASCRIPT
     $gradeTable.='To '.lc($viewgrade).' a submission or a group of submissions, click on the check box(es) '.
 	'next to the student\'s name(s). Then click on the Next button.<br />'."\n".
 	'<input type="hidden" name="command" value="processGroup" />'."\n";
+
+# checkall buttons
+    $gradeTable.=&check_script('gradesub', 'stuinfo');
     $gradeTable.='<input type="button" '."\n".
 	'onClick="javascript:checkSelect(this.form.stuinfo);" '."\n".
-	'value="Next->" />'."\n";
-
-    my (undef, undef, $fullname) = &getclasslist($getsec,'1');  
+	'value="Next->" /> <br />'."\n";
+    $gradeTable.=&check_buttons();
+    $gradeTable.='<label><input type="checkbox" name="checkPlag" checked="checked" />Check For Plagiarism</label>';
+    my ($classlist, undef, $fullname) = &getclasslist($getsec,'1');
     $gradeTable.='<table border="0"><tr><td bgcolor="#777777">'.
 	'<table border="0"><tr bgcolor="#e6ffff">';
     my $loop = 0;
     while ($loop < 2) {
 	$gradeTable.='<td><b>&nbsp;No.</b>&nbsp;</td><td><b>&nbsp;Select&nbsp;</b></td>'.
-	    '<td>'.&nameUserString('header').'</td>';
-	if ($ENV{'form.showgrading'} eq 'yes' && $submitonly ne 'all') {
+	    '<td>'.&nameUserString('header').'&nbsp;Section/Group</td>';
+	if ($env{'form.showgrading'} eq 'yes' 
+	    && $submitonly ne 'queued'
+	    && $submitonly ne 'all') {
 	    foreach (sort(@$partlist)) {
-		$gradeTable.='<td><b>&nbsp;Part '.(split(/_/))[0].' Status&nbsp;</b></td>';
+		my $display_part=&get_display_part((split(/_/))[0],$symb);
+		$gradeTable.='<td><b>&nbsp;Part: '.$display_part.
+		    ' Status&nbsp;</b></td>';
 	    }
+	} elsif ($submitonly eq 'queued') {
+	    $gradeTable.='<td><b>&nbsp;'.&mt('Queue Status').'&nbsp;</b></td>';
 	}
 	$loop++;
 #	$gradeTable.='<td></td>' if ($loop%2 ==1);
@@ -563,37 +812,71 @@ LISTJAVASCRIPT
     $gradeTable.='</tr>'."\n";
 
     my $ctr = 0;
-    foreach my $student (sort {lc($$fullname{$a}) cmp lc($$fullname{$b}) } keys %$fullname) {
+    foreach my $student (sort 
+			 {
+			     if (lc($$fullname{$a}) ne lc($$fullname{$b})) {
+				 return (lc($$fullname{$a}) cmp lc($$fullname{$b}));
+			     }
+			     return $a cmp $b;
+			 }
+			 (keys(%$fullname))) {
 	my ($uname,$udom) = split(/:/,$student);
+
 	my %status = ();
-	if ($ENV{'form.showgrading'} eq 'yes' && $submitonly ne 'all') {
-	    (%status) =&student_gradeStatus($url,$symb,$udom,$uname,$partlist);
-	    my $statusflg = '';
+
+	if ($submitonly eq 'queued') {
+	    my %queue_status = 
+		&Apache::bridgetask::get_student_status($symb,$cdom,$cnum,
+							$udom,$uname);
+	    next if (!defined($queue_status{'gradingqueue'}));
+	    $status{'gradingqueue'} = $queue_status{'gradingqueue'};
+	}
+
+	if ($env{'form.showgrading'} eq 'yes' 
+	    && $submitonly ne 'queued'
+	    && $submitonly ne 'all') {
+	    (%status) =&student_gradeStatus($symb,$udom,$uname,$partlist);
+	    my $submitted = 0;
+	    my $graded = 0;
+	    my $incorrect = 0;
 	    foreach (keys(%status)) {
-		$statusflg = 1 if ($status{$_} ne 'nothing');
+		$submitted = 1 if ($status{$_} ne 'nothing');
+		$graded = 1 if ($status{$_} =~ /^ungraded/);
+		$incorrect = 1 if ($status{$_} =~ /^incorrect/);
+		
 		my ($foo,$partid,$foo1) = split(/\./,$_);
 		if ($status{'resource.'.$partid.'.submitted_by'} ne '') {
-		    $statusflg = '';
+		    $submitted = 0;
+		    my ($part)=split(/\./,$partid);
 		    $gradeTable.='<input type="hidden" name="'.
-			$student.':submitted_by" value="'.
+			$student.':'.$part.':submitted_by" value="'.
 			$status{'resource.'.$partid.'.submitted_by'}.'" />';
 		}
 	    }
-	    next if ($statusflg eq '' && $submitonly eq 'yes');
+	    
+	    next if (!$submitted && ($submitonly eq 'yes' ||
+				     $submitonly eq 'incorrect' ||
+				     $submitonly eq 'graded'));
+	    next if (!$graded && ($submitonly eq 'graded'));
+	    next if (!$incorrect && $submitonly eq 'incorrect');
 	}
 
 	$ctr++;
+	my $section = $classlist->{$student}->[&Apache::loncoursedata::CL_SECTION()];
+
 	if ( $perm{'vgr'} eq 'F' ) {
 	    $gradeTable.='<tr bgcolor="#ffffe6">' if ($ctr%2 ==1);
 	    $gradeTable.='<td align="right">'.$ctr.'&nbsp;</td>'.
-		'<td align="center"><input type=checkbox name="stuinfo" value="'.
-		$student.':'.$$fullname{$student}.'&nbsp;"></td>'."\n".
-		'<td>'.&nameUserString(undef,$$fullname{$student},$uname,$udom).'</td>'."\n";
+               '<td align="center"><label><input type=checkbox name="stuinfo" value="'.
+               $student.':'.$$fullname{$student}.':::SECTION'.$section.
+	       ')&nbsp;" />&nbsp;&nbsp;</label></td>'."\n".'<td>'.
+	       &nameUserString(undef,$$fullname{$student},$uname,$udom).
+	       '&nbsp;'.$section.'</td>'."\n";
 
-	    if ($ENV{'form.showgrading'} eq 'yes' && $submitonly ne 'all') {
+	    if ($env{'form.showgrading'} eq 'yes' && $submitonly ne 'all') {
 		foreach (sort keys(%status)) {
 		    next if (/^resource.*?submitted_by$/);
-		    $gradeTable.='<td align="middle">&nbsp;'.$status{$_}.'&nbsp;</td>'."\n";
+		    $gradeTable.='<td align="center">&nbsp;'.$status{$_}.'&nbsp;</td>'."\n";
 		}
 	    }
 #	    $gradeTable.='<td></td>' if ($ctr%2 ==1);
@@ -602,49 +885,102 @@ LISTJAVASCRIPT
     }
     if ($ctr%2 ==1) {
 	$gradeTable.='<td>&nbsp;</td><td>&nbsp;</td><td>&nbsp;</td>';
-	    if ($ENV{'form.showgrading'} eq 'yes' && $submitonly ne 'all') {
+	    if ($env{'form.showgrading'} eq 'yes' 
+		&& $submitonly ne 'queued'
+		&& $submitonly ne 'all') {
 		foreach (@$partlist) {
 		    $gradeTable.='<td>&nbsp;</td>';
 		}
+	    } elsif ($submitonly eq 'queued') {
+		$gradeTable.='<td>&nbsp;</td>';
 	    }
 	$gradeTable.='</tr>';
     }
 
-    $gradeTable.='</table></td></tr></table>'.
+    $gradeTable.='</table></td></tr></table>'."\n".
 	'<input type="button" '.
 	'onClick="javascript:checkSelect(this.form.stuinfo);" '.
 	'value="Next->" /></form>'."\n";
     if ($ctr == 0) {
 	my $num_students=(scalar(keys(%$fullname)));
 	if ($num_students eq 0) {
-	    $gradeTable='<br />&nbsp;<font color="red">There are no students currently enrolled.</font>';
+	    $gradeTable='<br />&nbsp;<span class="LC_warning">There are no students currently enrolled.</span>';
 	} else {
-	    $gradeTable='<br />&nbsp;<font color="red">'.
-		'No submissions found for this resource for any students. ('.$num_students.
-		' checked for submissions</font><br />';
+	    my $submissions='submissions';
+	    if ($submitonly eq 'incorrect') { $submissions = 'incorrect submissions'; }
+	    if ($submitonly eq 'graded'   ) { $submissions = 'ungraded submissions'; }
+	    if ($submitonly eq 'queued'   ) { $submissions = 'queued submissions'; }
+	    $gradeTable='<br />&nbsp;<span class="LC_warning">'.
+		'No '.$submissions.' found for this resource for any students. ('.$num_students.
+		' students checked for '.$submissions.')</span><br />';
 	}
     } elsif ($ctr == 1) {
 	$gradeTable =~ s/type=checkbox/type=checkbox checked/;
     }
-    $gradeTable.=&show_grading_menu_form($symb,$url);
+    $gradeTable.=&show_grading_menu_form($symb);
     $request->print($gradeTable);
     return '';
 }
 
 #---- Called from the listStudents routine
+
+sub check_script {
+    my ($form, $type)=@_;
+    my $chkallscript='<script type="text/javascript">
+    function checkall() {
+        for (i=0; i<document.forms.'.$form.'.elements.length; i++) {
+            ele = document.forms.'.$form.'.elements[i];
+            if (ele.name == "'.$type.'") {
+            document.forms.'.$form.'.elements[i].checked=true;
+                                       }
+        }
+    }
+
+    function checksec() {
+        for (i=0; i<document.forms.'.$form.'.elements.length; i++) {
+            ele = document.forms.'.$form.'.elements[i];
+           string = document.forms.'.$form.'.chksec.value;
+           if
+          (ele.value.indexOf(":::SECTION"+string)>0) {
+              document.forms.'.$form.'.elements[i].checked=true;
+            }
+        }
+    }
+
+
+    function uncheckall() {
+        for (i=0; i<document.forms.'.$form.'.elements.length; i++) {
+            ele = document.forms.'.$form.'.elements[i];
+            if (ele.name == "'.$type.'") {
+            document.forms.'.$form.'.elements[i].checked=false;
+                                       }
+        }
+    }
+
+</script>'."\n";
+    return $chkallscript;
+}
+
+sub check_buttons {
+    my $buttons.='<input type="button" onclick="checkall()" value="Check All" />';
+    $buttons.='<input type="button" onclick="uncheckall()" value="Uncheck All" />&nbsp;';
+    $buttons.='<input type="button" onclick="checksec()" value="Check Section/Group" />';
+    $buttons.='<input type="text" size="5" name="chksec" />&nbsp;';
+    return $buttons;
+}
+
 #     Displays the submissions for one student or a group of students
 sub processGroup {
     my ($request)  = shift;
     my $ctr        = 0;
-    my @stuchecked = (ref($ENV{'form.stuinfo'}) ? @{$ENV{'form.stuinfo'}}
-		      : ($ENV{'form.stuinfo'}));
+    my @stuchecked = &Apache::loncommon::get_env_multiple('form.stuinfo');
     my $total      = scalar(@stuchecked)-1;
 
-    foreach (@stuchecked) {
-	my ($uname,$udom,$fullname) = split(/:/);
-	$ENV{'form.student'}        = $uname;
-	$ENV{'form.userdom'}        = $udom;
-	$ENV{'form.fullname'}       = $fullname;
+    foreach my $student (@stuchecked) {
+	my ($uname,$udom,$fullname) = split(/:/,$student);
+	$env{'form.student'}        = $uname;
+	$env{'form.userdom'}        = $udom;
+	$env{'form.fullname'}       = $fullname;
 	&submission($request,$ctr,$total);
 	$ctr++;
     }
@@ -837,6 +1173,83 @@ sub sub_page_kw_js {
     my $request = shift;
     my $iconpath = $request->dir_config('lonIconsURL');
     &commonJSfunctions($request);
+
+    my $inner_js_msg_central=<<INNERJS;
+    <script text="text/javascript">
+    function checkInput() {
+      opener.document.SCORE.msgsub.value = opener.checkEntities(document.msgcenter.msgsub.value);
+      var nmsg   = opener.document.SCORE.savemsgN.value;
+      var usrctr = document.msgcenter.usrctr.value;
+      var newval = opener.document.SCORE["newmsg"+usrctr];
+      newval.value = opener.checkEntities(document.msgcenter.newmsg.value);
+
+      var msgchk = "";
+      if (document.msgcenter.subchk.checked) {
+         msgchk = "msgsub,";
+      }
+      var includemsg = 0;
+      for (var i=1; i<=nmsg; i++) {
+          var opnmsg = opener.document.SCORE["savemsg"+i];
+          var frmmsg = document.msgcenter["msg"+i];
+          opnmsg.value = opener.checkEntities(frmmsg.value);
+          var showflg = opener.document.SCORE["shownOnce"+i];
+          showflg.value = "1";
+          var chkbox = document.msgcenter["msgn"+i];
+          if (chkbox.checked) {
+             msgchk += "savemsg"+i+",";
+             includemsg = 1;
+          }
+      }
+      if (document.msgcenter.newmsgchk.checked) {
+         msgchk += "newmsg"+usrctr;
+         includemsg = 1;
+      }
+      imgformname = opener.document.SCORE["mailicon"+usrctr];
+      imgformname.src = "$iconpath/"+((includemsg) ? "mailto.gif" : "mailbkgrd.gif");
+      var includemsg = opener.document.SCORE["includemsg"+usrctr];
+      includemsg.value = msgchk;
+
+      self.close()
+
+    }
+    </script>
+INNERJS
+
+    my $inner_js_highlight_central=<<INNERJS;
+ <script type="text/javascript">
+    function updateChoice(flag) {
+      opener.document.SCORE.kwclr.value = opener.radioSelection(document.hlCenter.kwdclr);
+      opener.document.SCORE.kwsize.value = opener.radioSelection(document.hlCenter.kwdsize);
+      opener.document.SCORE.kwstyle.value = opener.radioSelection(document.hlCenter.kwdstyle);
+      opener.document.SCORE.refresh.value = "on";
+      if (opener.document.SCORE.keywords.value!=""){
+         opener.document.SCORE.submit();
+      }
+      self.close()
+    }
+</script>
+INNERJS
+
+    my $start_page_msg_central = 
+        &Apache::loncommon::start_page('Message Central',$inner_js_msg_central,
+				       {'js_ready'  => 1,
+					'only_body' => 1,
+					'bgcolor'   =>'#FFFFFF',});
+    my $end_page_msg_central = 
+	&Apache::loncommon::end_page({'js_ready' => 1});
+
+
+    my $start_page_highlight_central = 
+        &Apache::loncommon::start_page('Highlight Central',
+				       $inner_js_highlight_central,
+				       {'js_ready'  => 1,
+					'only_body' => 1,
+					'bgcolor'   =>'#FFFFFF',});
+    my $end_page_highlight_central = 
+	&Apache::loncommon::end_page({'js_ready' => 1});
+
+    my $docopen=&Apache::lonhtmlcommon::javascript_docopen();
+    $docopen=~s/^document\.//;
     $request->print(<<SUBJAVASCRIPT);
 <script type="text/javascript" language="javascript">
 
@@ -946,59 +1359,15 @@ sub sub_page_kw_js {
     var ypos = (screen.height-height)/2-30;
     ypos = (ypos < 0) ? '0' : ypos;
 
-    pWin = window.open('', 'MessageCenter', 'toolbar=no,location=no,scrollbars='+scrollbar+',screenx='+xpos+',screeny='+ypos+',width=600,height='+height);
+    pWin = window.open('', 'MessageCenter', 'resizable=yes,toolbar=no,location=no,scrollbars='+scrollbar+',screenx='+xpos+',screeny='+ypos+',width=600,height='+height);
     pWin.focus();
     pDoc = pWin.document;
-    pDoc.open('text/html','replace');
-    pDoc.write("<html><head>");
-    pDoc.write("<title>Message Central</title>");
-
-    pDoc.write("<script language=javascript>");
-    pDoc.write("function checkInput() {");
-    pDoc.write("  opener.document.SCORE.msgsub.value = opener.checkEntities(document.msgcenter.msgsub.value);");
-    pDoc.write("  var nmsg   = opener.document.SCORE.savemsgN.value;");
-    pDoc.write("  var usrctr = document.msgcenter.usrctr.value;");
-    pDoc.write("  var newval = opener.document.SCORE[\\"newmsg\\"+usrctr];");
-    pDoc.write("  newval.value = opener.checkEntities(document.msgcenter.newmsg.value);");
-
-    pDoc.write("  var msgchk = \\"\\";");
-    pDoc.write("  if (document.msgcenter.subchk.checked) {");
-    pDoc.write("     msgchk = \\"msgsub,\\";");
-    pDoc.write("  }");
-    pDoc.write("  var includemsg = 0;");
-    pDoc.write("  for (var i=1; i<=nmsg; i++) {");
-    pDoc.write("      var opnmsg = opener.document.SCORE[\\"savemsg\\"+i];");
-    pDoc.write("      var frmmsg = document.msgcenter[\\"msg\\"+i];");
-    pDoc.write("      opnmsg.value = opener.checkEntities(frmmsg.value);");
-    pDoc.write("      var showflg = opener.document.SCORE[\\"shownOnce\\"+i];");
-    pDoc.write("      showflg.value = \\"1\\";");
-    pDoc.write("      var chkbox = document.msgcenter[\\"msgn\\"+i];");
-    pDoc.write("      if (chkbox.checked) {");
-    pDoc.write("         msgchk += \\"savemsg\\"+i+\\",\\";");
-    pDoc.write("         includemsg = 1;");
-    pDoc.write("      }");
-    pDoc.write("  }");
-    pDoc.write("  if (document.msgcenter.newmsgchk.checked) {");
-    pDoc.write("     msgchk += \\"newmsg\\"+usrctr;");
-    pDoc.write("     includemsg = 1;");
-    pDoc.write("  }");
-    pDoc.write("  imgformname = opener.document.SCORE[\\"mailicon\\"+usrctr];");
-    pDoc.write("  imgformname.src = \\"$iconpath/\\"+((includemsg) ? \\"mailto.gif\\" : \\"mailbkgrd.gif\\");");
-    pDoc.write("  var includemsg = opener.document.SCORE[\\"includemsg\\"+usrctr];");
-    pDoc.write("  includemsg.value = msgchk;");
-
-    pDoc.write("  self.close()");
-
-    pDoc.write("}");
-
-    pDoc.write("<");
-    pDoc.write("/script>");
-
-    pDoc.write("</head><body bgcolor=white>");
+    pDoc.$docopen;
+    pDoc.write('$start_page_msg_central');
 
     pDoc.write("<form action=\\"inactive\\" name=\\"msgcenter\\">");
     pDoc.write("<input value=\\""+usrctr+"\\" name=\\"usrctr\\" type=\\"hidden\\">");
-    pDoc.write("<font color=\\"green\\" size=+1>&nbsp;Compose Message for \"+fullname+\"</font><br><br>");
+    pDoc.write("<h3><span class=\\"LC_info\\">&nbsp;Compose Message for \"+fullname+\"</span></h3><br /><br />");
 
     pDoc.write("<table border=0 width=100%><tr><td bgcolor=\\"#777777\\">");
     pDoc.write("<table border=0 width=100%><tr bgcolor=\\"#ddffff\\">");
@@ -1033,9 +1402,9 @@ sub sub_page_kw_js {
     pDoc.write("</table>");
     pDoc.write("</td></tr></table>&nbsp;");
     pDoc.write("<input type=\\"button\\" value=\\"Save\\" onClick=\\"javascript:checkInput()\\">&nbsp;&nbsp;");
-    pDoc.write("<input type=\\"button\\" value=\\"Cancel\\" onClick=\\"self.close()\\"><br><br>");
+    pDoc.write("<input type=\\"button\\" value=\\"Cancel\\" onClick=\\"self.close()\\"><br /><br />");
     pDoc.write("</form>");
-    pDoc.write("</body></html>");
+    pDoc.write('$end_page_msg_central');
     pDoc.close();
 }
 
@@ -1077,32 +1446,13 @@ sub sub_page_kw_js {
     var ypos = (screen.height-330)/2-30;
     ypos = (ypos < 0) ? '0' : ypos;
 
-    hwdWin = window.open('', 'KeywordHighlightCentral', 'toolbar=no,location=no,scrollbars=no,width=400,height=300,screenx='+xpos+',screeny='+ypos);
+    hwdWin = window.open('', 'KeywordHighlightCentral', 'resizeable=yes,toolbar=no,location=no,scrollbars=no,width=400,height=300,screenx='+xpos+',screeny='+ypos);
     hwdWin.focus();
     var hDoc = hwdWin.document;
-    hDoc.open('text/html','replace');
-    hDoc.write("<html><head>");
-    hDoc.write("<title>Highlight Central</title>");
-
-    hDoc.write("<script language=javascript>");
-    hDoc.write("function updateChoice(flag) {");
-    hDoc.write("  opener.document.SCORE.kwclr.value = opener.radioSelection(document.hlCenter.kwdclr);");
-    hDoc.write("  opener.document.SCORE.kwsize.value = opener.radioSelection(document.hlCenter.kwdsize);");
-    hDoc.write("  opener.document.SCORE.kwstyle.value = opener.radioSelection(document.hlCenter.kwdstyle);");
-    hDoc.write("  opener.document.SCORE.refresh.value = \\"on\\";");
-    hDoc.write("  if (opener.document.SCORE.keywords.value!=\\"\\"){");
-    hDoc.write("     opener.document.SCORE.submit();");
-    hDoc.write("  }");
-    hDoc.write("  self.close()");
-    hDoc.write("}");
-
-    hDoc.write("<");
-    hDoc.write("/script>");
-
-    hDoc.write("</head><body bgcolor=white>");
-
+    hDoc.$docopen;
+    hDoc.write('$start_page_highlight_central');
     hDoc.write("<form action=\\"inactive\\" name=\\"hlCenter\\">");
-    hDoc.write("<font color=\\"green\\" size=+1>&nbsp;Keyword Highlight Options</font><br><br>");
+    hDoc.write("<h3><span class=\\"LC_info\\">&nbsp;Keyword Highlight Options</span></h3><br /><br />");
 
     hDoc.write("<table border=0 width=100%><tr><td bgcolor=\\"#777777\\">");
     hDoc.write("<table border=0 width=100%><tr bgcolor=\\"#ddffff\\">");
@@ -1126,9 +1476,9 @@ sub sub_page_kw_js {
     hDoc.write("</table>");
     hDoc.write("</td></tr></table>&nbsp;");
     hDoc.write("<input type=\\"button\\" value=\\"Save\\" onClick=\\"javascript:updateChoice(1)\\">&nbsp;&nbsp;");
-    hDoc.write("<input type=\\"button\\" value=\\"Cancel\\" onClick=\\"self.close()\\"><br><br>");
+    hDoc.write("<input type=\\"button\\" value=\\"Cancel\\" onClick=\\"self.close()\\"><br /><br />");
     hDoc.write("</form>");
-    hDoc.write("</body></html>");
+    hDoc.write('$end_page_highlight_central');
     hDoc.close();
   }
 
@@ -1136,36 +1486,51 @@ sub sub_page_kw_js {
 SUBJAVASCRIPT
 }
 
+sub get_increment {
+    my $increment = $env{'form.increment'};
+    if ($increment != 1 && $increment != .5 && $increment != .25 &&
+        $increment != .1) {
+        $increment = 1;
+    }
+    return $increment;
+}
+
 #--- displays the grading box, used in essay type problem and grading by page/sequence
 sub gradeBox {
     my ($request,$symb,$uname,$udom,$counter,$partid,$record) = @_;
-
-    my $checkIcon = '<img src="'.$request->dir_config('lonIconsURL').
+    my $checkIcon = '<img alt="'.&mt('Check Mark').
+	'" src="'.$request->dir_config('lonIconsURL').
 	'/check.gif" height="16" border="0" />';
-
     my $wgt    = &Apache::lonnet::EXT('resource.'.$partid.'.weight',$symb,$udom,$uname);
     my $wgtmsg = ($wgt > 0 ? '(problem weight)' : 
-		  '<font color="red">problem weight assigned by computer</font>');
+		  '<span class="LC_info">problem weight assigned by computer</span>');
     $wgt       = ($wgt > 0 ? $wgt : '1');
     my $score  = ($$record{'resource.'.$partid.'.awarded'} eq '' ?
-		  '' : $$record{'resource.'.$partid.'.awarded'}*$wgt);
+		  '' : &compute_points($$record{'resource.'.$partid.'.awarded'},$wgt));
     my $result='<input type="hidden" name="WGT'.$counter.'_'.$partid.'" value="'.$wgt.'" />'."\n";
-
+    my $display_part=&get_display_part($partid,$symb);
+    my %last_resets = &get_last_resets($symb,$env{'request.course.id'},
+				       [$partid]);
+    my $aggtries = $$record{'resource.'.$partid.'.tries'};
+    if ($last_resets{$partid}) {
+        $aggtries = &get_num_tries($record,$last_resets{$partid},$partid);
+    }
     $result.='<table border="0"><tr><td>'.
-	'<b>Part </b>'.$partid.' <b>Points: </b></td><td>'."\n";
-
+	'<b>Part: </b>'.$display_part.' <b>Points: </b></td><td>'."\n";
     my $ctr = 0;
+    my $thisweight = 0;
+    my $increment = &get_increment();
     $result.='<table border="0"><tr>'."\n";  # display radio buttons in a nice table 10 across
-    while ($ctr<=$wgt) {
-	$result.= '<td><input type="radio" name="RADVAL'.$counter.'_'.$partid.'" '.
+    while ($thisweight<=$wgt) {
+	$result.= '<td><span style="white-space: nowrap;"><label><input type="radio" name="RADVAL'.$counter.'_'.$partid.'" '.
 	    'onclick="javascript:writeBox(this.form,\''.$counter.'_'.$partid.'\','.
-	    $ctr.')" value="'.$ctr.'" '.
-	    ($score eq $ctr ? 'checked':'').' /> '.$ctr."</td>\n";
+	    $thisweight.')" value="'.$thisweight.'" '.
+	    ($score eq $thisweight ? 'checked="checked"':'').' /> '.$thisweight."</label></span></td>\n";
 	$result.=(($ctr+1)%10 == 0 ? '</tr><tr>' : '');
+        $thisweight += $increment;
 	$ctr++;
     }
     $result.='</tr></table>';
-
     $result.='</td><td>&nbsp;<b>or</b>&nbsp;</td>'."\n";
     $result.='<td><input type="text" name="GD_BOX'.$counter.'_'.$partid.'"'.
 	($score ne ''? ' value = "'.$score.'"':'').' size="4" '.
@@ -1174,89 +1539,208 @@ sub gradeBox {
     $result.='<td>/'.$wgt.' '.$wgtmsg.
 	($$record{'resource.'.$partid.'.solved'} eq 'correct_by_student' ? '&nbsp;'.$checkIcon : '').
 	' </td><td>'."\n";
-
     $result.='<select name="GD_SEL'.$counter.'_'.$partid.'" '.
 	'onChange="javascript:clearRadBox(this.form,\''.$counter.'_'.$partid.'\')" >'."\n";
     if ($$record{'resource.'.$partid.'.solved'} eq 'excused') {
-	$result.='<option> </option>'.
-	    '<option selected="on">excused</option>';
+	$result.='<option></option>'.
+	    '<option selected="selected">excused</option>';
     } else {
-	$result.='<option selected="on"> </option>'.
+	$result.='<option selected="selected"></option>'.
 	    '<option>excused</option>';
     }
     $result.='<option>reset status</option></select>'."\n";
-    $result.="&nbsp&nbsp\n";
+    $result.="&nbsp;&nbsp;\n";
     $result.='<input type="hidden" name="stores'.$counter.'_'.$partid.'" value="" />'."\n".
 	'<input type="hidden" name="oldpts'.$counter.'_'.$partid.'" value="'.$score.'" />'."\n".
 	'<input type="hidden" name="solved'.$counter.'_'.$partid.'" value="'.
-	$$record{'resource.'.$partid.'.solved'}.'" />'."\n";
+	$$record{'resource.'.$partid.'.solved'}.'" />'."\n".
+        '<input type="hidden" name="totaltries'.$counter.'_'.$partid.'" value="'.
+        $$record{'resource.'.$partid.'.tries'}.'" />'."\n".
+        '<input type="hidden" name="aggtries'.$counter.'_'.$partid.'" value="'.
+        $aggtries.'" />'."\n";
     $result.='</td></tr></table>'."\n";
+    $result.=&handback_box($symb,$uname,$udom,$counter,$partid,$record);
     return $result;
 }
 
+sub handback_box {
+    my ($symb,$uname,$udom,$counter,$partid,$record) = @_;
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
+    my (@respids);
+     my @part_response_id = &flatten_responseType($responseType);
+    foreach my $part_response_id (@part_response_id) {
+    	my ($part,$resp) = @{ $part_response_id };
+        if ($part eq $partid) {
+            push(@respids,$resp);
+        }
+    }
+    my $result;
+    foreach my $respid (@respids) {
+	my $prefix = $counter.'_'.$partid.'_'.$respid.'_';
+	my $files=&get_submitted_files($udom,$uname,$partid,$respid,$record);
+	next if (!@$files);
+	my $file_counter = 1;
+	foreach my $file (@$files) {
+	    if ($file =~ /\/portfolio\//) {
+    	        my ($file_path, $file_disp) = ($file =~ m|(.+/)(.+)$|);
+    	        my ($name,$version,$ext) = &file_name_version_ext($file_disp);
+    	        $file_disp = "$name.$ext";
+    	        $file = $file_path.$file_disp;
+    	        $result.=&mt('Return commented version of [_1] to student.',
+    			 '<span class="LC_filename">'.$file_disp.'</span>');
+    	        $result.='<input type="file"   name="'.$prefix.'returndoc'.$file_counter.'" />'."\n";
+    	        $result.='<input type="hidden" name="'.$prefix.'origdoc'.$file_counter.'" value="'.$file.'" /><br />';
+    	        $result.='(File will be uploaded when you click on Save & Next below.)<br />';
+    	        $file_counter++;
+	    }
+	}
+    }
+    return $result;    
+}
+
 sub show_problem {
-    my ($request,$symb,$uname,$udom,$removeform,$viewon) = @_;
-    my $rendered=&Apache::loncommon::get_student_view($symb,$uname,$udom,
-						      $ENV{'request.course.id'});
+    my ($request,$symb,$uname,$udom,$removeform,$viewon,$mode,$form) = @_;
+    my $rendered;
+    my %form = ((ref($form) eq 'HASH')? %{$form} : ());
+    &Apache::lonxml::remember_problem_counter();
+    if ($mode eq 'both' or $mode eq 'text') {
+	$rendered=&Apache::loncommon::get_student_view($symb,$uname,$udom,
+						       $env{'request.course.id'},
+						       undef,\%form);
+    }
     if ($removeform) {
 	$rendered=~s|<form(.*?)>||g;
 	$rendered=~s|</form>||g;
-	$rendered=~s|name="submit"|name="would_have_been_submit"|g;
+	$rendered=~s|(<input[^>]*name\s*=\s*"?)(\w+)("?)|$1would_have_been_$2$3|g;
+    }
+    my $companswer;
+    if ($mode eq 'both' or $mode eq 'answer') {
+	&Apache::lonxml::restore_problem_counter();
+	$companswer=
+	    &Apache::loncommon::get_student_answers($symb,$uname,$udom,
+						    $env{'request.course.id'},
+						    %form);
     }
-    my $companswer=&Apache::loncommon::get_student_answers($symb,$uname,$udom,
-							   $ENV{'request.course.id'});
     if ($removeform) {
 	$companswer=~s|<form(.*?)>||g;
 	$companswer=~s|</form>||g;
-	$rendered=~s|name="submit"|name="would_have_been_submit"|g;
+	$companswer=~s|name="submit"|name="would_have_been_submit"|g;
     }
     my $result.='<table border="0" width="100%"><tr><td bgcolor="#777777">';
     $result.='<table border="0" width="100%">';
-    $result.='<tr><td bgcolor="#e6ffff"><b> View of the problem - '.$ENV{'form.fullname'}.
-	'</b></td></tr>' if ($viewon);
-    $result.='<tr><td bgcolor="#ffffff">'.$rendered.'<br />';
-    $result.='<b>Correct answer:</b><br />'.$companswer;
+    if ($viewon) {
+	$result.='<tr><td bgcolor="#e6ffff"><b> ';
+	if ($mode eq 'both' or $mode eq 'text') {
+	    $result.='View of the problem - ';
+	} else {
+	    $result.='Correct answer: ';
+	}
+	$result.=$env{'form.fullname'}.'</b></td></tr>';
+    }
+    if ($mode eq 'both') {
+	$result.='<tr><td bgcolor="#ffffff">'.$rendered.'<br />';
+	$result.='<b>Correct answer:</b><br />'.$companswer;
+    } elsif ($mode eq 'text') {
+	$result.='<tr><td bgcolor="#ffffff">'.$rendered;
+    } elsif ($mode eq 'answer') {
+	$result.='<tr><td bgcolor="#ffffff">'.$companswer;
+    }
     $result.='</td></tr></table>';
     $result.='</td></tr></table><br />';
     return $result;
 }
 
+sub files_exist {
+    my ($r, $symb) = @_;
+    my @students = &Apache::loncommon::get_env_multiple('form.stuinfo');
+
+    foreach my $student (@students) {
+        my ($uname,$udom,$fullname) = split(/:/,$student);
+        my %record = &Apache::lonnet::restore($symb,$env{'request.course.id'},
+					      $udom,$uname);
+        my ($string,$timestamp)= &get_last_submission(\%record);
+        foreach my $submission (@$string) {
+            my ($partid,$respid) =
+		($submission =~ /^resource\.([^\.]*)\.([^\.]*)\.submission/);
+            my $files=&get_submitted_files($udom,$uname,$partid,$respid,
+					   \%record);
+            return 1 if (@$files);
+        }
+    }
+    return 0;
+}
+
+sub download_all_link {
+    my ($r,$symb) = @_;
+    my $all_students = 
+	join("\n", &Apache::loncommon::get_env_multiple('form.stuinfo'));
+
+    my $parts =
+	join("\n",&Apache::loncommon::get_env_multiple('form.vPart'));
+
+    my $identifier = &Apache::loncommon::get_cgi_id();
+    &Apache::lonnet::appenv('cgi.'.$identifier.'.students' => $all_students,
+                            'cgi.'.$identifier.'.symb' => $symb,
+                            'cgi.'.$identifier.'.parts' => $parts,);
+    $r->print('<a href="/cgi-bin/multidownload.pl?'.$identifier.'">'.
+	      &mt('Download All Submitted Documents').'</a>');
+    return
+}
+
+sub build_section_inputs {
+    my $section_inputs;
+    if ($env{'form.section'} eq '') {
+        $section_inputs .= '<input type="hidden" name="section" value="all" />'."\n";
+    } else {
+        my @sections = &Apache::loncommon::get_env_multiple('form.section');
+        foreach my $section (@sections) {
+            $section_inputs .= '<input type="hidden" name="section" value="'.$section.'" />'."\n";
+        }
+    }
+    return $section_inputs;
+}
+
 # --------------------------- show submissions of a student, option to grade 
 sub submission {
     my ($request,$counter,$total) = @_;
 
-    (my $url=$ENV{'form.url'})=~s-^http://($ENV{'SERVER_NAME'}|$ENV{'HTTP_HOST'})--;
-    my ($uname,$udom)     = ($ENV{'form.student'},$ENV{'form.userdom'});
-    $udom = ($udom eq '' ? $ENV{'user.domain'} : $udom); #has form.userdom changed for a student?
-    my $usec = &Apache::lonnet::getsection($udom,$uname,$ENV{'request.course.id'});
-    $ENV{'form.fullname'} = &get_fullname ($uname,$udom) if $ENV{'form.fullname'} eq '';
-
-    my $symb=($ENV{'form.symb'} ne '' ? $ENV{'form.symb'} : (&Apache::lonnet::symbread($url)));
-    if ($symb eq '') { $request->print("Unable to handle ambiguous references:$url:."); return ''; }
+    my ($uname,$udom)     = ($env{'form.student'},$env{'form.userdom'});
+    $udom = ($udom eq '' ? $env{'user.domain'} : $udom); #has form.userdom changed for a student?
+    my $usec = &Apache::lonnet::getsection($udom,$uname,$env{'request.course.id'});
+    $env{'form.fullname'} = &Apache::loncommon::plainname($uname,$udom,'lastname') if $env{'form.fullname'} eq '';
+    my $symb = &get_symb($request); 
+    if ($symb eq '') { $request->print("Unable to handle ambiguous references:."); return ''; }
 
     if (!&canview($usec)) {
-	$request->print('<font color="red">Unable to view requested student.('.
-			$uname.$udom.$usec.$ENV{'request.course.id'}.')</font>');
-	$request->print(&show_grading_menu_form($symb,$url));
+	$request->print('<span class="LC_warning">Unable to view requested student.('.
+			$uname.':'.$udom.' in section '.$usec.' in course id '.
+			$env{'request.course.id'}.')</span>');
+	$request->print(&show_grading_menu_form($symb));
 	return;
     }
 
-    $ENV{'form.lastSub'} = ($ENV{'form.lastSub'} eq '' ? 'datesub' : $ENV{'form.lastSub'});
-    my $last = ($ENV{'form.lastSub'} eq 'last' ? 'last' : '');
-    my $checkIcon = '<img src="'.$request->dir_config('lonIconsURL').
+    if (!$env{'form.lastSub'}) { $env{'form.lastSub'} = 'datesub'; }
+    if (!$env{'form.vProb'}) { $env{'form.vProb'} = 'yes'; }
+    if (!$env{'form.vAns'}) { $env{'form.vAns'} = 'yes'; }
+    my $last = ($env{'form.lastSub'} eq 'last' ? 'last' : '');
+    my $checkIcon = '<img alt="'.&mt('Check Mark').
+	'" src="'.$request->dir_config('lonIconsURL').
 	'/check.gif" height="16" border="0" />';
 
+    my %old_essays;
     # header info
     if ($counter == 0) {
 	&sub_page_js($request);
-	&sub_page_kw_js($request) if ($ENV{'form.handgrade'} eq 'yes');
-	$ENV{'form.probTitle'} = $ENV{'form.probTitle'} eq '' ? 
-	    &Apache::lonnet::gettitle($symb) : $ENV{'form.probTitle'};
-
-	$request->print('<h3>&nbsp;<font color="#339933">Submission Record</font></h3>'."\n".
-			'<font size=+1>&nbsp;<b>Resource: </b>'.$ENV{'form.probTitle'}.'</font>'."\n");
+	&sub_page_kw_js($request) if ($env{'form.handgrade'} eq 'yes');
+	$env{'form.probTitle'} = $env{'form.probTitle'} eq '' ? 
+	    &Apache::lonnet::gettitle($symb) : $env{'form.probTitle'};
+	if ($env{'form.handgrade'} eq 'yes' && &files_exist($request, $symb)) {
+	    &download_all_link($request, $symb);
+	}
+	$request->print('<h3>&nbsp;<span class="LC_info">Submission Record</span></h3>'."\n".
+			'<h4>&nbsp;<b>Resource: </b>'.$env{'form.probTitle'}.'</h4>'."\n");
 
-	if ($ENV{'form.handgrade'} eq 'no') {
+	if ($env{'form.handgrade'} eq 'no') {
 	    my $checkMark='<br /><br />&nbsp;<b>Note:</b> Part(s) graded correct by the computer is marked with a '.
 		$checkIcon.' symbol.'."\n";
 	    $request->print($checkMark);
@@ -1264,63 +1748,75 @@ sub submission {
 
 	# option to display problem, only once else it cause problems 
         # with the form later since the problem has a form.
-	if ($ENV{'form.vProb'} eq 'yes' or !$ENV{'form.vProb'}) {
-	    $request->print(&show_problem($request,$symb,$uname,$udom,0,1));
+	if ($env{'form.vProb'} eq 'yes' or $env{'form.vAns'} eq 'yes') {
+	    my $mode;
+	    if ($env{'form.vProb'} eq 'yes' && $env{'form.vAns'} eq 'yes') {
+		$mode='both';
+	    } elsif ($env{'form.vProb'} eq 'yes') {
+		$mode='text';
+	    } elsif ($env{'form.vAns'} eq 'yes') {
+		$mode='answer';
+	    }
+	    &Apache::lonxml::clear_problem_counter();
+	    $request->print(&show_problem($request,$symb,$uname,$udom,0,1,$mode));
 	}
-	
+
 	# kwclr is the only variable that is guaranteed to be non blank 
         # if this subroutine has been called once.
 	my %keyhash = ();
-	if ($ENV{'form.kwclr'} eq '' && $ENV{'form.handgrade'} eq 'yes') {
+	if ($env{'form.kwclr'} eq '' && $env{'form.handgrade'} eq 'yes') {
 	    %keyhash = &Apache::lonnet::dump('nohist_handgrade',
-					     $ENV{'course.'.$ENV{'request.course.id'}.'.domain'},
-					     $ENV{'course.'.$ENV{'request.course.id'}.'.num'});
-
-	    my $loginuser = $ENV{'user.name'}.':'.$ENV{'user.domain'};
-	    $ENV{'form.keywords'} = $keyhash{$symb.'_keywords'} ne '' ? $keyhash{$symb.'_keywords'} : '';
-	    $ENV{'form.kwclr'}    = $keyhash{$loginuser.'_kwclr'} ne '' ? $keyhash{$loginuser.'_kwclr'} : 'red';
-	    $ENV{'form.kwsize'}   = $keyhash{$loginuser.'_kwsize'} ne '' ? $keyhash{$loginuser.'_kwsize'} : '0';
-	    $ENV{'form.kwstyle'}  = $keyhash{$loginuser.'_kwstyle'} ne '' ? $keyhash{$loginuser.'_kwstyle'} : '';
-	    $ENV{'form.msgsub'}   = $keyhash{$symb.'_subject'} ne '' ? 
-		$keyhash{$symb.'_subject'} : $ENV{'form.probTitle'};
-	    $ENV{'form.savemsgN'} = $keyhash{$symb.'_savemsgN'} ne '' ? $keyhash{$symb.'_savemsgN'} : '0';
-	}
-	my $overRideScore = $ENV{'form.overRideScore'} eq '' ? 'no' : $ENV{'form.overRideScore'};
+					     $env{'course.'.$env{'request.course.id'}.'.domain'},
+					     $env{'course.'.$env{'request.course.id'}.'.num'});
 
-	$request->print('<form action="/adm/grades" method="post" name="SCORE">'."\n".
+	    my $loginuser = $env{'user.name'}.':'.$env{'user.domain'};
+	    $env{'form.keywords'} = $keyhash{$symb.'_keywords'} ne '' ? $keyhash{$symb.'_keywords'} : '';
+	    $env{'form.kwclr'}    = $keyhash{$loginuser.'_kwclr'} ne '' ? $keyhash{$loginuser.'_kwclr'} : 'red';
+	    $env{'form.kwsize'}   = $keyhash{$loginuser.'_kwsize'} ne '' ? $keyhash{$loginuser.'_kwsize'} : '0';
+	    $env{'form.kwstyle'}  = $keyhash{$loginuser.'_kwstyle'} ne '' ? $keyhash{$loginuser.'_kwstyle'} : '';
+	    $env{'form.msgsub'}   = $keyhash{$symb.'_subject'} ne '' ? 
+		$keyhash{$symb.'_subject'} : $env{'form.probTitle'};
+	    $env{'form.savemsgN'} = $keyhash{$symb.'_savemsgN'} ne '' ? $keyhash{$symb.'_savemsgN'} : '0';
+	}
+	my $overRideScore = $env{'form.overRideScore'} eq '' ? 'no' : $env{'form.overRideScore'};
+	my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
+	$request->print('<form action="/adm/grades" method="post" name="SCORE" enctype="multipart/form-data">'."\n".
 			'<input type="hidden" name="command"    value="handgrade" />'."\n".
-			'<input type="hidden" name="saveState"  value="'.$ENV{'form.saveState'}.'" />'."\n".
-			'<input type="hidden" name="Status"     value="'.$ENV{'form.Status'}.'" />'."\n".
+			'<input type="hidden" name="saveState"  value="'.$env{'form.saveState'}.'" />'."\n".
+			'<input type="hidden" name="Status"     value="'.$stu_status.'" />'."\n".
 			'<input type="hidden" name="overRideScore" value="'.$overRideScore.'" />'."\n".
-			'<input type="hidden" name="probTitle"  value="'.$ENV{'form.probTitle'}.'" />'."\n".
+			'<input type="hidden" name="probTitle"  value="'.$env{'form.probTitle'}.'" />'."\n".
 			'<input type="hidden" name="refresh"    value="off" />'."\n".
 			'<input type="hidden" name="studentNo"  value="" />'."\n".
 			'<input type="hidden" name="gradeOpt"   value="" />'."\n".
-			'<input type="hidden" name="symb"       value="'.$symb.'" />'."\n".
-			'<input type="hidden" name="url"        value="'.$url.'" />'."\n".
-			'<input type="hidden" name="showgrading" value="'.$ENV{'form.showgrading'}.'" />'."\n".
-			'<input type="hidden" name="vProb"      value="'.$ENV{'form.vProb'}.'" />'."\n".
-			'<input type="hidden" name="lastSub"    value="'.$ENV{'form.lastSub'}.'" />'."\n".
-			'<input type="hidden" name="section"    value="'.$ENV{'form.section'}.'">'."\n".
-			'<input type="hidden" name="submitonly" value="'.$ENV{'form.submitonly'}.'">'."\n".
-			'<input type="hidden" name="handgrade"  value="'.$ENV{'form.handgrade'}.'">'."\n".
+			'<input type="hidden" name="symb"       value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+			'<input type="hidden" name="showgrading" value="'.$env{'form.showgrading'}.'" />'."\n".
+			'<input type="hidden" name="vProb"      value="'.$env{'form.vProb'}.'" />'."\n".
+			'<input type="hidden" name="vAns"       value="'.$env{'form.vAns'}.'" />'."\n".
+			'<input type="hidden" name="lastSub"    value="'.$env{'form.lastSub'}.'" />'."\n".
+			&build_section_inputs().
+			'<input type="hidden" name="submitonly" value="'.$env{'form.submitonly'}.'" />'."\n".
+			'<input type="hidden" name="handgrade"  value="'.$env{'form.handgrade'}.'" />'."\n".
 			'<input type="hidden" name="NCT"'.
-			' value="'.($ENV{'form.NTSTU'} ne '' ? $ENV{'form.NTSTU'} : $total+1).'" />'."\n");
-	if ($ENV{'form.handgrade'} eq 'yes') {
-	    $request->print('<input type="hidden" name="keywords" value="'.$ENV{'form.keywords'}.'" />'."\n".
-			    '<input type="hidden" name="kwclr"    value="'.$ENV{'form.kwclr'}.'" />'."\n".
-			    '<input type="hidden" name="kwsize"   value="'.$ENV{'form.kwsize'}.'" />'."\n".
-			    '<input type="hidden" name="kwstyle"  value="'.$ENV{'form.kwstyle'}.'" />'."\n".
-			    '<input type="hidden" name="msgsub"   value="'.$ENV{'form.msgsub'}.'" />'."\n".
+			' value="'.($env{'form.NTSTU'} ne '' ? $env{'form.NTSTU'} : $total+1).'" />'."\n");
+	if ($env{'form.handgrade'} eq 'yes') {
+	    $request->print('<input type="hidden" name="keywords" value="'.$env{'form.keywords'}.'" />'."\n".
+			    '<input type="hidden" name="kwclr"    value="'.$env{'form.kwclr'}.'" />'."\n".
+			    '<input type="hidden" name="kwsize"   value="'.$env{'form.kwsize'}.'" />'."\n".
+			    '<input type="hidden" name="kwstyle"  value="'.$env{'form.kwstyle'}.'" />'."\n".
+			    '<input type="hidden" name="msgsub"   value="'.$env{'form.msgsub'}.'" />'."\n".
 			    '<input type="hidden" name="shownSub" value="0" />'."\n".
-			    '<input type="hidden" name="savemsgN" value="'.$ENV{'form.savemsgN'}.'" />'."\n");
+			    '<input type="hidden" name="savemsgN" value="'.$env{'form.savemsgN'}.'" />'."\n");
+	    foreach my $partid (&Apache::loncommon::get_env_multiple('form.vPart')) {
+		$request->print('<input type="hidden" name="vPart" value="'.$partid.'" />'."\n");
+	    }
 	}
 	
 	my ($cts,$prnmsg) = (1,'');
-	while ($cts <= $ENV{'form.savemsgN'}) {
+	while ($cts <= $env{'form.savemsgN'}) {
 	    $prnmsg.='<input type="hidden" name="savemsg'.$cts.'" value="'.
 		(!exists($keyhash{$symb.'_savemsg'.$cts}) ? 
-		 &Apache::lonfeedback::clear_out_html($ENV{'form.savemsg'.$cts}) :
+		 &Apache::lonfeedback::clear_out_html($env{'form.savemsg'.$cts}) :
 		 &Apache::lonfeedback::clear_out_html($keyhash{$symb.'_savemsg'.$cts})).
 		'" />'."\n".
 		'<input type="hidden" name="shownOnce'.$cts.'" value="0" />'."\n";
@@ -1328,49 +1824,63 @@ sub submission {
 	}
 	$request->print($prnmsg);
 
-	if ($ENV{'form.handgrade'} eq 'yes' && $ENV{'form.showgrading'} eq 'yes') {
+	if ($env{'form.handgrade'} eq 'yes' && $env{'form.showgrading'} eq 'yes') {
 #
 # Print out the keyword options line
 #
 	    $request->print(<<KEYWORDS);
 &nbsp;<b>Keyword Options:</b>&nbsp;
-<a href="javascript:keywords(document.SCORE)"; TARGET=_self>List</a>&nbsp; &nbsp;
+<a href="javascript:keywords(document.SCORE);" target="_self">List</a>&nbsp; &nbsp;
 <a href="#" onMouseDown="javascript:getSel(); return false"
  CLASS="page">Paste Selection to List</a>&nbsp; &nbsp;
-<a href="javascript:kwhighlight()"; TARGET=_self>Highlight Attribute</a><br /><br />
+<a href="javascript:kwhighlight();" target="_self">Highlight Attribute</a><br /><br />
 KEYWORDS
 #
 # Load the other essays for similarity check
 #
-            my $essayurl=&Apache::lonnet::declutter($url);
-	    my ($adom,$aname,$apath)=($essayurl=~/^(\w+)\/(\w+)\/(.*)$/);
-	    $apath=&Apache::lonnet::escape($apath);
+            my (undef,undef,$essayurl) = &Apache::lonnet::decode_symb($symb);
+	    my ($adom,$aname,$apath)=($essayurl=~/^($LONCAPA::domain_re)\/($LONCAPA::username_re)\/(.*)$/);
+	    $apath=&escape($apath);
 	    $apath=~s/\W/\_/gs;
-	    %oldessays=&Apache::lonnet::dump('nohist_essay_'.$apath,$adom,$aname);
+	    %old_essays=&Apache::lonnet::dump('nohist_essay_'.$apath,$adom,$aname);
         }
     }
 
-    if ($ENV{'form.vProb'} eq 'all') {
-	$request->print('<br /><br /><br />') if ($counter > 0);
-	$request->print(&show_problem($request,$symb,$uname,$udom,1,1));
+# This is where output for one specific student would start
+    my $bgcolor='#DDEEDD';
+    if (int($counter/2) eq $counter) { $bgcolor='#DDDDEE'; }
+    $request->print("\n\n".
+                    '<p><table border="2"><tr><th bgcolor="'.$bgcolor.'">'.$env{'form.fullname'}.'</th></tr><tr><td bgcolor="'.$bgcolor.'">');
+
+    if ($env{'form.vProb'} eq 'all' or $env{'form.vAns'} eq 'all') {
+	my $mode;
+	if ($env{'form.vProb'} eq 'all' && $env{'form.vAns'} eq 'all') {
+	    $mode='both';
+	} elsif ($env{'form.vProb'} eq 'all' ) {
+	    $mode='text';
+	} elsif ($env{'form.vAns'} eq 'all') {
+	    $mode='answer';
+	}
+	&Apache::lonxml::clear_problem_counter();
+	$request->print(&show_problem($request,$symb,$uname,$udom,1,1,$mode));
     }
-    my %record = &Apache::lonnet::restore($symb,$ENV{'request.course.id'},$udom,$uname);
 
-    my ($partlist,$handgrade) = &response_type($url,$symb);
+    my %record = &Apache::lonnet::restore($symb,$env{'request.course.id'},$udom,$uname);
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
 
     # Display student info
     $request->print(($counter == 0 ? '' : '<br />'));
-    my $result='<table border="0" width=100%><tr><td bgcolor="#777777">'."\n".
-	'<table border="0" width=100%><tr bgcolor="#edffff"><td>'."\n";
+    my $result='<table border="0" width="100%"><tr><td bgcolor="#777777">'."\n".
+	'<table border="0" width="100%"><tr bgcolor="#edffff"><td>'."\n";
 
-    $result.='<b>Fullname: </b>'.&nameUserString(undef,$ENV{'form.fullname'},$uname,$udom).'<br />'."\n";
+    $result.='<b>Fullname: </b>'.&nameUserString(undef,$env{'form.fullname'},$uname,$udom).'<br />'."\n";
     $result.='<input type="hidden" name="name'.$counter.
-	'" value="'.$ENV{'form.fullname'}.'" />'."\n";
+	'" value="'.$env{'form.fullname'}.'" />'."\n";
 
     # If any part of the problem is an essay-response (handgraded), then check for collaborators
     my @col_fullnames;
     my ($classlist,$fullname);
-    if ($ENV{'form.handgrade'} eq 'yes') {
+    if ($env{'form.handgrade'} eq 'yes') {
 	($classlist,undef,$fullname) = &getclasslist('all','0');
 	for (keys (%$handgrade)) {
 	    my $ncol = &Apache::lonnet::EXT('resource.'.$_.
@@ -1403,8 +1913,10 @@ KEYWORDS
 		    $result.=$$fullname{$_}.'&nbsp; &nbsp; &nbsp;';
 		}
                 $result.='<br />'."\n";
+		my ($part)=split(/\./,$_);
 		$result.='<input type="hidden" name="collaborator'.$counter.
-		    '" value="'.(join ':',@goodcollaborators).'" />'."\n";
+		    '" value="'.$part.':'.(join ':',@goodcollaborators).'" />'.
+		    "\n";
 	    }
 	    if (scalar(@badcollaborators) > 0) {
 		$result.='<table border="0"><tr bgcolor="#ffbbbb"><td>';
@@ -1429,75 +1941,105 @@ KEYWORDS
     #                  (for multi-response type part)
     #             (3) Last submission plus the parts info
     #             (4) The whole record for this student
-    if ($ENV{'form.lastSub'} =~ /^(lastonly|hdgrade)$/) {
-	if ($ENV{'form.'.$uname.':'.$udom.':submitted_by'}) {
-	    my $submitby=''.
-		'<b>Collaborative submission by: </b>'.
-		'<a href="javascript:viewSubmitter(\''.
-		$ENV{'form.'.$uname.':'.$udom.':submitted_by'}.
-		'\')"; TARGET=_self>'.
-		$$fullname{$ENV{'form.'.$uname.':'.$udom.':submitted_by'}}.'</a>';
-	    $request->print($submitby);
-	} else {
-	    my ($string,$timestamp)= &get_last_submission (\%record);
-	    my $lastsubonly=''.
-		($$timestamp eq '' ? '' : '<b>Date Submitted:</b> '.
-		 $$timestamp)."</td></tr>\n";
-	    if ($$timestamp eq '') {
-		$lastsubonly.='<tr><td bgcolor="#ffffe6">'.$$string[0]; 
-	    } else {
-		for my $part (sort keys(%$handgrade)) {
-		    my ($responsetype,$foo) = split(/:/,$$handgrade{$part});
-		    my ($partid,$respid) = split(/_/,$part);
-		    if (!exists($record{'resource.'.$partid.'.'.$respid.'.submission'})) {
-			$lastsubonly.='<tr><td bgcolor="#ffffe6"><b>Part '.
-			    $partid.'</b> <font color="#999999">( ID '.$respid.
-			    ' )</font>&nbsp; &nbsp;'.
-			    '<font color="red">Nothing submitted - no attempts</font><br /><br />';
- 		    } else {
-			foreach (@$string) {
-			    my ($partid,$respid) = /^resource\.(\w+)\.(\w+)\.submission/;
-			    if ($part eq ($partid.'_'.$respid)) {
-				my ($ressub,$subval) = split(/:/,$_,2);
-                            # Similarity check
-				my $similar='';
-				my ($oname,$odom,$ocrsid,$oessay,$osim)=&most_similar($uname,$udom,$subval);
-				if ($osim) {
-				    $osim=int($osim*100.0);
-				    $similar='<hr /><h3><font color="#FF0000">Essay is '.$osim.
-					'% similar to an essay by '.&Apache::loncommon::plainname($oname,$odom).
-					'</font></h3><blockquote><i>'.
-					&keywords_highlight($oessay).'</i></blockquote><hr />';
-				}
-				$lastsubonly.='<tr><td bgcolor="#ffffe6"><b>Part '.
-				    $partid.'</b> <font color="#999999">( ID '.$respid.
-				    ' )</font>&nbsp; &nbsp;'.
-				    ($record{"resource.$partid.$respid.uploadedurl"}?
-				     '<a href="'.
-				     &Apache::lonnet::tokenwrapper($record{"resource.$partid.$respid.uploadedurl"}).
-				     '"><img src="/adm/lonIcons/unknown.gif" border=0"> File uploaded by student</a> '.
-				     '<font color="red" size="1">Like all files provided by users, '.
-				     'this file may contain virusses</font><br />':'').
-				     '<b>Submitted Answer: </b>'.
-				     &cleanRecord($subval,$responsetype,$symb).
-				      '<br /><br />'.$similar."\n"
-				     if ($ENV{'form.lastSub'} eq 'lastonly' || 
-					 ($ENV{'form.lastSub'} eq 'hdgrade' && 
-					  $$handgrade{$part} =~ /:yes$/));
+    if ($env{'form.lastSub'} =~ /^(lastonly|hdgrade)$/) {
+	my ($string,$timestamp)= &get_last_submission(\%record);
+	my $lastsubonly=''.
+	    ($$timestamp eq '' ? '' : '<b>Date Submitted:</b> '.
+	     $$timestamp)."</td></tr>\n";
+	if ($$timestamp eq '') {
+	    $lastsubonly.='<tr><td bgcolor="#ffffe6">'.$$string[0]; 
+	} else {
+	    my %seenparts;
+	    my @part_response_id = &flatten_responseType($responseType);
+	    foreach my $part (@part_response_id) {
+		next if ($env{'form.lastSub'} eq 'hdgrade' 
+			 && $$handgrade{$$part[0].'_'.$$part[1]} ne 'yes');
+
+		my ($partid,$respid) = @{ $part };
+		my $display_part=&get_display_part($partid,$symb);
+		if ($env{"form.$uname:$udom:$partid:submitted_by"}) {
+		    if (exists($seenparts{$partid})) { next; }
+		    $seenparts{$partid}=1;
+		    my $submitby='<b>Part:</b> '.$display_part.
+			' <b>Collaborative submission by:</b> '.
+			'<a href="javascript:viewSubmitter(\''.
+			$env{"form.$uname:$udom:$partid:submitted_by"}.
+			'\');" target="_self">'.
+			$$fullname{$env{"form.$uname:$udom:$partid:submitted_by"}}.'</a><br />';
+		    $request->print($submitby);
+		    next;
+		}
+		my $responsetype = $responseType->{$partid}->{$respid};
+		if (!exists($record{"resource.$partid.$respid.submission"})) {
+		    $lastsubonly.='<tr><td bgcolor="#ffffe6"><b>Part:</b> '.
+			$display_part.' <span class="LC_internal_info">( ID '.$respid.
+			' )</span>&nbsp; &nbsp;'.
+			'<span class="LC_warning">Nothing submitted - no attempts</span><br /><br />';
+		    next;
+		}
+		foreach (@$string) {
+		    my ($partid,$respid) = /^resource\.([^\.]*)\.([^\.]*)\.submission/;
+		    if (join('_',@{$part}) ne ($partid.'_'.$respid)) { next; }
+		    my ($ressub,$subval) = split(/:/,$_,2);
+		    # Similarity check
+		    my $similar='';
+		    if($env{'form.checkPlag'}){
+			my ($oname,$odom,$ocrsid,$oessay,$osim)=
+			    &most_similar($uname,$udom,$subval,\%old_essays);
+			if ($osim) {
+			    $osim=int($osim*100.0);
+			    my %old_course_desc = 
+				&Apache::lonnet::coursedescription($ocrsid,
+								   {'one_time' => 1});
+
+			    $similar="<hr /><h3><span class=\"LC_warning\">".
+				&mt('Essay is [_1]% similar to an essay by [_2] ([_3]:[_4]) in course [_5] (course id [_6]:[_7])',
+				    $osim,
+				    &Apache::loncommon::plainname($oname,$odom),
+				    $oname,$odom,
+				    $old_course_desc{'description'},
+				    $old_course_desc{'num'},
+				    $old_course_desc{'domain'}).
+				'</span></h3><blockquote><i>'.
+				&keywords_highlight($oessay).
+				'</i></blockquote><hr />';
+			}
+		    }
+		    my $order=&get_order($partid,$respid,$symb,$uname,$udom);
+		    if ($env{'form.lastSub'} eq 'lastonly' || 
+			($env{'form.lastSub'} eq 'hdgrade' && 
+			 $$handgrade{$$part[0].'_'.$$part[1]} eq 'yes')) {
+			my $display_part=&get_display_part($partid,$symb);
+			$lastsubonly.='<tr><td bgcolor="#ffffe6"><b>Part:</b> '.
+			    $display_part.' <span class="LC_internal_info">( ID '.$respid.
+			    ' )</span>&nbsp; &nbsp;';
+			my $files=&get_submitted_files($udom,$uname,$partid,$respid,\%record);
+			if (@$files) {
+			    $lastsubonly.='<br /><span class="LC_warning">Like all files provided by users, this file may contain virusses</span><br />';
+			    my $file_counter = 0;
+			    foreach my $file (@$files) {
+			        $file_counter ++;
+				&Apache::lonnet::allowuploaded('/adm/grades',$file);
+				$lastsubonly.='<br /><a href="'.$file.'?rawmode=1" target="lonGRDs"><img src="'.&Apache::loncommon::icon($file).'" border=0"> '.$file.'</a>';
 			    }
+			    $lastsubonly.='<br />';
 			}
+			$lastsubonly.='<b>Submitted Answer: </b>'.
+			    &cleanRecord($subval,$responsetype,$symb,$partid,
+					 $respid,\%record,$order);
+			if ($similar) {$lastsubonly.="<br /><br />$similar\n";}
 		    }
 		}
 	    }
-	    $lastsubonly.='</td></tr><tr bgcolor="#ffffff"><td>'."\n";
-	    $request->print($lastsubonly);
 	}
-    } elsif ($ENV{'form.lastSub'} eq 'datesub') {
-	my (undef,$responseType,undef,$parts) = &showResourceInfo($url);
-	$request->print(&displaySubByDates(\$symb,\%record,$parts,$responseType,$checkIcon));
-    } elsif ($ENV{'form.lastSub'} =~ /^(last|all)$/) {
+	$lastsubonly.='</td></tr><tr bgcolor="#ffffff"><td>'."\n";
+	$request->print($lastsubonly);
+    } elsif ($env{'form.lastSub'} eq 'datesub') {
+	my (undef,$responseType,undef,$parts) = &showResourceInfo($symb);
+	$request->print(&displaySubByDates($symb,\%record,$parts,$responseType,$checkIcon,$uname,$udom));
+    } elsif ($env{'form.lastSub'} =~ /^(last|all)$/) {
 	$request->print(&Apache::loncommon::get_previous_attempt($symb,$uname,$udom,
-								 $ENV{'request.course.id'},
+								 $env{'request.course.id'},
 								 $last,'.submission',
 								 'Apache::grades::keywords_highlight'));
     }
@@ -1506,21 +2048,24 @@ KEYWORDS
 	.$udom.'" />'."\n");
     
     # return if view submission with no grading option
-    if ($ENV{'form.showgrading'} eq '' || (!&canmodify($usec))) {
+    if ($env{'form.showgrading'} eq '' || (!&canmodify($usec))) {
 	my $toGrade.='<input type="button" value="Grade Student" '.
 	    'onClick="javascript:checksubmit(this.form,\'Grade Student\',\''
-	    .$counter.'\');" TARGET=_self> &nbsp;'."\n" if (&canmodify($usec));
-	$toGrade.='</td></tr></table></td></tr></table></form>'."\n";
-	$toGrade.=&show_grading_menu_form($symb,$url) 
-	    if (($ENV{'form.command'} eq 'submission') || 
-		($ENV{'form.command'} eq 'processGroup' && $counter == $total));
-	$request = print($toGrade);
+	    .$counter.'\');" target="_self" /> &nbsp;'."\n" if (&canmodify($usec));
+	$toGrade.='</td></tr></table></td></tr></table>'."\n";
+	if (($env{'form.command'} eq 'submission') || 
+	    ($env{'form.command'} eq 'processGroup' && $counter == $total)) {
+	    $toGrade.='</form>'.&show_grading_menu_form($symb); 
+	}
+	$request->print($toGrade);
 	return;
+    } else {
+	$request->print('</td></tr></table></td></tr></table>'."\n");
     }
 
     # essay grading message center
-    if ($ENV{'form.handgrade'} eq 'yes') {
-	my ($lastname,$givenn) = split(/,/,$ENV{'form.fullname'});
+    if ($env{'form.handgrade'} eq 'yes') {
+	my ($lastname,$givenn) = split(/,/,$env{'form.fullname'});
 	my $msgfor = $givenn.' '.$lastname;
 	if (scalar(@col_fullnames) > 0) {
 	    my $lastone = pop @col_fullnames;
@@ -1530,26 +2075,39 @@ KEYWORDS
 	$result='<input type="hidden" name="includemsg'.$counter.'" value="" />'."\n".
 	    '<input type="hidden" name="newmsg'.$counter.'" value="" />'."\n";
 	$result.='&nbsp;<a href="javascript:msgCenter(document.SCORE,'.$counter.
-	    ',\''.$msgfor.'\')"; TARGET=_self>'.
-	    'Compose Message to student'.(scalar(@col_fullnames) >= 1 ? 's' : '').'</a> &nbsp;'.
+	    ',\''.$msgfor.'\');" target="_self">'.
+	    &mt('Compose message to student').(scalar(@col_fullnames) >= 1 ? 's' : '').'</a><label> ('.
+	    &mt('incl. grades').' <input type="checkbox" name="withgrades'.$counter.'" /></label>)'.
 	    '<img src="'.$request->dir_config('lonIconsURL').
 	    '/mailbkgrd.gif" width="14" height="10" name="mailicon'.$counter.'" />'."\n".
-	    '<br />&nbsp;(Message will be sent when you click on Save & Next below.)'."\n" 
-	    if ($ENV{'form.handgrade'} eq 'yes');
+	    '<br />&nbsp;('.
+	    &mt('Message will be sent when you click on Save & Next below.').")\n";
 	$request->print($result);
     }
+    if ($perm{'vgr'}) {
+	$request->print('<br />'.
+	    &Apache::loncommon::track_student_link(&mt('View recent activity'),
+						   $uname,$udom,'check'));
+    }
+    if ($perm{'opa'}) {
+	$request->print('<br />'.
+	    &Apache::loncommon::pprmlink(&mt('Set/Change parameters'),
+					 $uname,$udom,$symb,'check'));
+    }
 
     my %seen = ();
     my @partlist;
     my @gradePartRespid;
-    for (sort keys(%$handgrade)) {
-	my ($partid,$respid) = split(/_/);
+    my @part_response_id = &flatten_responseType($responseType);
+    foreach my $part_response_id (@part_response_id) {
+    	my ($partid,$respid) = @{ $part_response_id };
+	my $part_resp = join('_',@{ $part_response_id });
 	next if ($seen{$partid} > 0);
 	$seen{$partid}++;
-	next if ($$handgrade{$_} =~ /:no$/ && $ENV{'form.lastSub'} =~ /^(hdgrade)$/);
+	next if ($$handgrade{$part_resp} ne 'yes' 
+		 && $env{'form.lastSub'} eq 'hdgrade');
 	push @partlist,$partid;
 	push @gradePartRespid,$partid.'.'.$respid;
-
 	$request->print(&gradeBox($request,$symb,$uname,$udom,$counter,$partid,\%record));
     }
     $result='<input type="hidden" name="partlist'.$counter.
@@ -1564,26 +2122,33 @@ KEYWORDS
     }
     $request->print($result.'</td></tr></table></td></tr></table>'."\n");
 
+# Done with printing info for one student
+
+    $request->print('</td></tr></table></p>');
+
+
     # print end of form
     if ($counter == $total) {
 	my $endform='<table border="0"><tr><td>'."\n";
 	$endform.='<input type="button" value="Save & Next" '.
 	    'onClick="javascript:checksubmit(this.form,\'Save & Next\','.
-	    $total.','.scalar(@partlist).');" TARGET=_self> &nbsp;'."\n";
+	    $total.','.scalar(@partlist).');" target="_self" /> &nbsp;'."\n";
 	my $ntstu ='<select name="NTSTU">'.
 	    '<option>1</option><option>2</option>'.
 	    '<option>3</option><option>5</option>'.
 	    '<option>7</option><option>10</option></select>'."\n";
-	my $nsel = ($ENV{'form.NTSTU'} ne '' ? $ENV{'form.NTSTU'} : '1');
-	$ntstu =~ s/<option>$nsel</<option selected="on">$nsel</;
+	my $nsel = ($env{'form.NTSTU'} ne '' ? $env{'form.NTSTU'} : '1');
+	$ntstu =~ s/<option>$nsel</<option selected="selected">$nsel</;
 	$endform.=$ntstu.'student(s) &nbsp;&nbsp;';
 	$endform.='<input type="button" value="Previous" '.
-	    'onClick="javascript:checksubmit(this.form,\'Previous\');" TARGET=_self> &nbsp;'."\n".
+	    'onClick="javascript:checksubmit(this.form,\'Previous\');" target="_self" /> &nbsp;'."\n".
 	    '<input type="button" value="Next" '.
-	    'onClick="javascript:checksubmit(this.form,\'Next\');" TARGET=_self> &nbsp;';
+	    'onClick="javascript:checksubmit(this.form,\'Next\');" target="_self" /> &nbsp;';
 	$endform.='(Next and Previous (student) do not save the scores.)'."\n" ;
+        $endform.="<input type='hidden' value='".&get_increment().
+            "' name='increment' />";
 	$endform.='</td><tr></table></form>';
-	$endform.=&show_grading_menu_form($symb,$url);
+	$endform.=&show_grading_menu_form($symb);
 	$request->print($endform);
     }
     return '';
@@ -1597,33 +2162,38 @@ sub get_last_submission {
 	my %lasthash=();
 	my ($version);
 	for ($version=1;$version<=$$returnhash{'version'};$version++) {
-	    foreach (sort(split(/\:/,$$returnhash{$version.':keys'}))) {
-		$lasthash{$_}=$$returnhash{$version.':'.$_};
-		   $timestamp = scalar(localtime($$returnhash{$version.':timestamp'}));
+	    foreach my $key (sort(split(/\:/,
+					$$returnhash{$version.':keys'}))) {
+		$lasthash{$key}=$$returnhash{$version.':'.$key};
+		$timestamp = 
+		    scalar(localtime($$returnhash{$version.':timestamp'}));
 	    }
 	}
-	foreach ((keys %lasthash)) {
-	    if ($_ =~ /\.submission$/) {
-		my ($partid,$foo) = split(/submission$/,$_);
-		my $draft  = $lasthash{$partid.'awarddetail'} eq 'DRAFT' ?
-		    '<font color="red">Draft Copy</font> ' : '';
-		push @string, (join(':',$_,$draft.$lasthash{$_}));
-	    }
+	foreach my $key (keys(%lasthash)) {
+	    next if ($key !~ /\.submission$/);
+
+	    my ($partid,$foo) = split(/submission$/,$key);
+	    my $draft  = $lasthash{$partid.'awarddetail'} eq 'DRAFT' ?
+		'<span class="LC_warning">Draft Copy</span> ' : '';
+	    push(@string, join(':', $key, $draft.$lasthash{$key}));
 	}
     }
-    @string = $string[0] eq '' ? '<font color="red">Nothing submitted - no attempts.</font>' : @string;
-    return \@string,\$timestamp;
+    if (!@string) {
+	$string[0] =
+	    '<span class="LC_warning">Nothing submitted - no attempts.</span>';
+    }
+    return (\@string,\$timestamp);
 }
 
 #--- High light keywords, with style choosen by user.
 sub keywords_highlight {
     my $string    = shift;
-    my $size      = $ENV{'form.kwsize'} eq '0' ? '' : 'size='.$ENV{'form.kwsize'};
-    my $styleon   = $ENV{'form.kwstyle'} eq ''  ? '' : $ENV{'form.kwstyle'};
+    my $size      = $env{'form.kwsize'} eq '0' ? '' : 'size='.$env{'form.kwsize'};
+    my $styleon   = $env{'form.kwstyle'} eq ''  ? '' : $env{'form.kwstyle'};
     (my $styleoff = $styleon) =~ s/\</\<\//;
-    my @keylist   = split(/[,\s+]/,$ENV{'form.keywords'});
-    foreach (@keylist) {
-	$string =~ s/\b\Q$_\E(\b|\.)/<font color\=$ENV{'form.kwclr'} $size\>$styleon$_$styleoff<\/font>/gi;
+    my @keylist   = split(/[,\s+]/,$env{'form.keywords'});
+    foreach my $keyword (@keylist) {
+	$string =~ s/\b\Q$keyword\E(\b|\.)/<font color\=$env{'form.kwclr'} $size\>$styleon$keyword$styleoff<\/font>/gi;
     }
     return $string;
 }
@@ -1631,54 +2201,78 @@ sub keywords_highlight {
 #--- Called from submission routine
 sub processHandGrade {
     my ($request) = shift;
-    my $url    = $ENV{'form.url'};
-    my $symb   = $ENV{'form.symb'};
-    my $button = $ENV{'form.gradeOpt'};
-    my $ngrade = $ENV{'form.NCT'};
-    my $ntstu  = $ENV{'form.NTSTU'};
+    my $symb   = &get_symb($request);
+    my (undef,undef,$url) = &Apache::lonnet::decode_symb($symb);
+    my $button = $env{'form.gradeOpt'};
+    my $ngrade = $env{'form.NCT'};
+    my $ntstu  = $env{'form.NTSTU'};
+    my $cdom   = $env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $cnum   = $env{'course.'.$env{'request.course.id'}.'.num'};
+
     if ($button eq 'Save & Next') {
 	my $ctr = 0;
 	while ($ctr < $ngrade) {
-	    my ($uname,$udom) = split(/:/,$ENV{'form.unamedom'.$ctr});
-	    my ($errorflag,$pts,$wgt) = &saveHandGrade($request,$url,$symb,$uname,$udom,$ctr);
+	    my ($uname,$udom) = split(/:/,$env{'form.unamedom'.$ctr});
+	    my ($errorflag,$pts,$wgt) = &saveHandGrade($request,$symb,$uname,$udom,$ctr);
 	    if ($errorflag eq 'no_score') {
 		$ctr++;
 		next;
 	    }
 	    if ($errorflag eq 'not_allowed') {
-		$request->print("<font color=\"red\">Not allowed to modify grades for $uname:$udom</font>");
+		$request->print("<span class=\"LC_warning\">Not allowed to modify grades for $uname:$udom</span>");
 		$ctr++;
 		next;
 	    }
-	    my $includemsg = $ENV{'form.includemsg'.$ctr};
+	    my $includemsg = $env{'form.includemsg'.$ctr};
 	    my ($subject,$message,$msgstatus) = ('','','');
+	    my $restitle = &Apache::lonnet::gettitle($symb);
+            my ($feedurl,$showsymb) =
+		&get_feedurl_and_symb($symb,$uname,$udom);
+	    my $messagetail;
 	    if ($includemsg =~ /savemsg|newmsg\Q$ctr\E/) {
-		$subject = $ENV{'form.msgsub'} if ($includemsg =~ /^msgsub/);
+		$subject = $env{'form.msgsub'} if ($includemsg =~ /msgsub/);
+		unless ($subject=~/\w/) { $subject=&mt('Grading Feedback'); }
+		$subject.=' ['.$restitle.']';
 		my (@msgnum) = split(/,/,$includemsg);
 		foreach (@msgnum) {
-		    $message.=$ENV{'form.'.$_} if ($_ =~ /savemsg|newmsg/ && $_ ne '');
+		    $message.=$env{'form.'.$_} if ($_ =~ /savemsg|newmsg/ && $_ ne '');
 		}
 		$message =&Apache::lonfeedback::clear_out_html($message);
-		$message.="\n\nPoint".($pts > 1 ? 's':'').' awarded = '.$pts.' out of '.$wgt;
-		$message.=" for <a href=\"".
-		    &Apache::lonnet::clutter($url).
-		    "?symb=$symb\">$ENV{'form.probTitle'}</a>";
-		$msgstatus = &Apache::lonmsg::user_normal_msg ($uname,$udom,
-							       $ENV{'form.msgsub'},$message);
-	    }
-	    if ($ENV{'form.collaborator'.$ctr}) {
-		my (@collaborators) = split(/:/,$ENV{'form.collaborator'.$ctr});
-		foreach (@collaborators) {
-		    my ($errorflag,$pts,$wgt) = 
-			&saveHandGrade($request,$url,$symb,$_,$udom,$ctr,$ENV{'form.unamedom'.$ctr});
-		    if ($errorflag eq 'not_allowed') {
-			$request->print("<font color=\"red\">Not allowed to modify grades for $_:$udom</font>");
-			next;
-		    } else {
-			if ($message ne '') {
-			    $msgstatus = &Apache::lonmsg::user_normal_msg ($_,$udom,
-									   $ENV{'form.msgsub'},
-									   $message);
+		if ($env{'form.withgrades'.$ctr}) {
+		    $message.="\n\nPoint".($pts > 1 ? 's':'').' awarded = '.$pts.' out of '.$wgt;
+		    $messagetail = " for <a href=\"".
+		                   $feedurl."?symb=$showsymb\">$env{'form.probTitle'}</a>";
+		}
+		$msgstatus = 
+                    &Apache::lonmsg::user_normal_msg($uname,$udom,$subject,
+						     $message.$messagetail,
+                                                     undef,$feedurl,undef,
+                                                     undef,undef,$showsymb,
+                                                     $restitle);
+		$request->print('<br />'.&mt('Sending message to [_1]:[_2]',$uname,$udom).': '.
+				$msgstatus);
+	    }
+	    if ($env{'form.collaborator'.$ctr}) {
+		my @collabstrs=&Apache::loncommon::get_env_multiple("form.collaborator$ctr");
+		foreach my $collabstr (@collabstrs) {
+		    my ($part,@collaborators) = split(/:/,$collabstr);
+		    foreach my $collaborator (@collaborators) {
+			my ($errorflag,$pts,$wgt) = 
+			    &saveHandGrade($request,$symb,$collaborator,$udom,$ctr,
+					   $env{'form.unamedom'.$ctr},$part);
+			if ($errorflag eq 'not_allowed') {
+			    $request->print("<span class=\"LC_error\">".&mt('Not allowed to modify grades for [_1]',"$collaborator:$udom")."</span>");
+			    next;
+			} elsif ($message ne '') {
+			    my ($baseurl,$showsymb) = 
+				&get_feedurl_and_symb($symb,$collaborator,
+						      $udom);
+			    if ($env{'form.withgrades'.$ctr}) {
+				$messagetail = " for <a href=\"".
+                                    $baseurl."?symb=$showsymb\">$env{'form.probTitle'}</a>";
+			    }
+			    $msgstatus = 
+				&Apache::lonmsg::user_normal_msg($collaborator,$udom,$subject,$message.$messagetail,undef,$baseurl,undef,undef,undef,$showsymb,$restitle);
 			}
 		    }
 		}
@@ -1687,61 +2281,59 @@ sub processHandGrade {
 	}
     }
 
-    if ($ENV{'form.handgrade'} eq 'yes') {
+    if ($env{'form.handgrade'} eq 'yes') {
 	# Keywords sorted in alphabatical order
-	my $loginuser = $ENV{'user.name'}.':'.$ENV{'user.domain'};
+	my $loginuser = $env{'user.name'}.':'.$env{'user.domain'};
 	my %keyhash = ();
-	$ENV{'form.keywords'}           =~ s/,\s{0,}|\s+/ /g;
-	$ENV{'form.keywords'}           =~ s/^\s+|\s+$//;
-	my (@keywords) = sort(split(/\s+/,$ENV{'form.keywords'}));
-	$ENV{'form.keywords'} = join(' ',@keywords);
-	$keyhash{$symb.'_keywords'}     = $ENV{'form.keywords'};
-	$keyhash{$symb.'_subject'}      = $ENV{'form.msgsub'};
-	$keyhash{$loginuser.'_kwclr'}   = $ENV{'form.kwclr'};
-	$keyhash{$loginuser.'_kwsize'}  = $ENV{'form.kwsize'};
-	$keyhash{$loginuser.'_kwstyle'} = $ENV{'form.kwstyle'};
+	$env{'form.keywords'}           =~ s/,\s{0,}|\s+/ /g;
+	$env{'form.keywords'}           =~ s/^\s+|\s+$//;
+	my (@keywords) = sort(split(/\s+/,$env{'form.keywords'}));
+	$env{'form.keywords'} = join(' ',@keywords);
+	$keyhash{$symb.'_keywords'}     = $env{'form.keywords'};
+	$keyhash{$symb.'_subject'}      = $env{'form.msgsub'};
+	$keyhash{$loginuser.'_kwclr'}   = $env{'form.kwclr'};
+	$keyhash{$loginuser.'_kwsize'}  = $env{'form.kwsize'};
+	$keyhash{$loginuser.'_kwstyle'} = $env{'form.kwstyle'};
 
 	# message center - Order of message gets changed. Blank line is eliminated.
-	# New messages are saved in ENV for the next student.
+	# New messages are saved in env for the next student.
 	# All messages are saved in nohist_handgrade.db
 	my ($ctr,$idx) = (1,1);
-	while ($ctr <= $ENV{'form.savemsgN'}) {
-	    if ($ENV{'form.savemsg'.$ctr} ne '') {
-		$keyhash{$symb.'_savemsg'.$idx} = $ENV{'form.savemsg'.$ctr};
+	while ($ctr <= $env{'form.savemsgN'}) {
+	    if ($env{'form.savemsg'.$ctr} ne '') {
+		$keyhash{$symb.'_savemsg'.$idx} = $env{'form.savemsg'.$ctr};
 		$idx++;
 	    }
 	    $ctr++;
 	}
 	$ctr = 0;
 	while ($ctr < $ngrade) {
-	    if ($ENV{'form.newmsg'.$ctr} ne '') {
-		$keyhash{$symb.'_savemsg'.$idx} = $ENV{'form.newmsg'.$ctr};
-		$ENV{'form.savemsg'.$idx} = $ENV{'form.newmsg'.$ctr};
+	    if ($env{'form.newmsg'.$ctr} ne '') {
+		$keyhash{$symb.'_savemsg'.$idx} = $env{'form.newmsg'.$ctr};
+		$env{'form.savemsg'.$idx} = $env{'form.newmsg'.$ctr};
 		$idx++;
 	    }
 	    $ctr++;
 	}
-	$ENV{'form.savemsgN'} = --$idx;
-	$keyhash{$symb.'_savemsgN'} = $ENV{'form.savemsgN'};
+	$env{'form.savemsgN'} = --$idx;
+	$keyhash{$symb.'_savemsgN'} = $env{'form.savemsgN'};
 	my $putresult = &Apache::lonnet::put
-	    ('nohist_handgrade',\%keyhash,
-	     $ENV{'course.'.$ENV{'request.course.id'}.'.domain'},
-	     $ENV{'course.'.$ENV{'request.course.id'}.'.num'});
+	    ('nohist_handgrade',\%keyhash,$cdom,$cnum);
     }
     # Called by Save & Refresh from Highlight Attribute Window
-    my (undef,undef,$fullname) = &getclasslist($ENV{'form.section'},'1');
-    if ($ENV{'form.refresh'} eq 'on') {
+    my (undef,undef,$fullname) = &getclasslist($env{'form.section'},'1');
+    if ($env{'form.refresh'} eq 'on') {
 	my ($ctr,$total) = (0,0);
 	while ($ctr < $ngrade) {
-	    $total++ if  $ENV{'form.unamedom'.$ctr} ne '';
+	    $total++ if  $env{'form.unamedom'.$ctr} ne '';
 	    $ctr++;
 	}
-	$ENV{'form.NTSTU'}=$ngrade;
+	$env{'form.NTSTU'}=$ngrade;
 	$ctr = 0;
 	while ($ctr < $total) {
-	    my $processUser = $ENV{'form.unamedom'.$ctr};
-	    ($ENV{'form.student'},$ENV{'form.userdom'}) = split(/:/,$processUser);
-	    $ENV{'form.fullname'} = $$fullname{$processUser};
+	    my $processUser = $env{'form.unamedom'.$ctr};
+	    ($env{'form.student'},$env{'form.userdom'}) = split(/:/,$processUser);
+	    $env{'form.fullname'} = $$fullname{$processUser};
 	    &submission($request,$ctr,$total-1);
 	    $ctr++;
 	}
@@ -1750,27 +2342,33 @@ sub processHandGrade {
 
 # Go directly to grade student - from submission or link from chart page
     if ($button eq 'Grade Student') {
-	(undef,undef,$ENV{'form.handgrade'},undef,undef) = &showResourceInfo($url);
-	my $processUser = $ENV{'form.unamedom'.$ENV{'form.studentNo'}};
-	($ENV{'form.student'},$ENV{'form.userdom'}) = split(/:/,$processUser);
-	$ENV{'form.fullname'} = $$fullname{$processUser};
+	(undef,undef,$env{'form.handgrade'},undef,undef) = &showResourceInfo($symb);
+	my $processUser = $env{'form.unamedom'.$env{'form.studentNo'}};
+	($env{'form.student'},$env{'form.userdom'}) = split(/:/,$processUser);
+	$env{'form.fullname'} = $$fullname{$processUser};
 	&submission($request,0,0);
 	return '';
     }
 
     # Get the next/previous one or group of students
-    my $firststu = $ENV{'form.unamedom0'};
-    my $laststu = $ENV{'form.unamedom'.($ngrade-1)};
+    my $firststu = $env{'form.unamedom0'};
+    my $laststu = $env{'form.unamedom'.($ngrade-1)};
     my $ctr = 2;
     while ($laststu eq '') {
-	$laststu  = $ENV{'form.unamedom'.($ngrade-$ctr)};
+	$laststu  = $env{'form.unamedom'.($ngrade-$ctr)};
 	$ctr++;
 	$laststu = $firststu if ($ctr > $ngrade);
     }
 
     my (@parsedlist,@nextlist);
     my ($nextflg) = 0;
-    foreach (sort {lc($$fullname{$a}) cmp lc($$fullname{$b}) } keys %$fullname) {
+    foreach (sort 
+	     {
+		 if (lc($$fullname{$a}) ne lc($$fullname{$b})) {
+		     return (lc($$fullname{$a}) cmp lc($$fullname{$b}));
+		 }
+		 return $a cmp $b;
+	     } (keys(%$fullname))) {
 	if ($nextflg == 1 && $button =~ /Next$/) {
 	    push @parsedlist,$_;
 	}
@@ -1782,15 +2380,38 @@ sub processHandGrade {
     }
     $ctr = 0;
     @parsedlist = reverse @parsedlist if ($button eq 'Previous');
+    my ($partlist) = &response_type($symb);
     foreach my $student (@parsedlist) {
+	my $submitonly=$env{'form.submitonly'};
 	my ($uname,$udom) = split(/:/,$student);
-	if ($ENV{'form.submitonly'} eq 'yes') {
-	    my %record = &Apache::lonnet::restore($symb,$ENV{'request.course.id'},$udom,$uname);
-	    my $statusflg = '';
-	    foreach (split(/:/,$ENV{'form.gradePartRespid'})){
-		$statusflg = 1 if (exists ($record{'resource.'.$_.'.submission'}));
+	
+	if ($submitonly eq 'queued') {
+	    my %queue_status = 
+		&Apache::bridgetask::get_student_status($symb,$cdom,$cnum,
+							$udom,$uname);
+	    next if (!defined($queue_status{'gradingqueue'}));
+	}
+
+	if ($submitonly =~ /^(yes|graded|incorrect)$/) {
+#	    my %record = &Apache::lonnet::restore($symb,$env{'request.course.id'},$udom,$uname);
+	    my %status=&student_gradeStatus($symb,$udom,$uname,$partlist);
+	    my $submitted = 0;
+	    my $ungraded = 0;
+	    my $incorrect = 0;
+	    foreach (keys(%status)) {
+		$submitted = 1 if ($status{$_} ne 'nothing');
+		$ungraded = 1 if ($status{$_} =~ /^ungraded/);
+		$incorrect = 1 if ($status{$_} =~ /^incorrect/);
+		my ($foo,$partid,$foo1) = split(/\./,$_);
+		if ($status{'resource.'.$partid.'.submitted_by'} ne '') {
+		    $submitted = 0;
+		}
 	    }
-	    next if ($statusflg eq '');
+	    next if (!$submitted && ($submitonly eq 'yes' ||
+				     $submitonly eq 'incorrect' ||
+				     $submitonly eq 'graded'));
+	    next if (!$ungraded && ($submitonly eq 'graded'));
+	    next if (!$incorrect && $submitonly eq 'incorrect');
 	}
 	push @nextlist,$student if ($ctr < $ntstu);
 	last if ($ctr == $ntstu);
@@ -1802,17 +2423,17 @@ sub processHandGrade {
 
     foreach (sort @nextlist) {
 	my ($uname,$udom,$submitter) = split(/:/);
-	$ENV{'form.student'}  = $uname;
-	$ENV{'form.userdom'}  = $udom;
-	$ENV{'form.fullname'} = $$fullname{$_};
+	$env{'form.student'}  = $uname;
+	$env{'form.userdom'}  = $udom;
+	$env{'form.fullname'} = $$fullname{$_};
 	&submission($request,$ctr,$total);
 	$ctr++;
     }
     if ($total < 0) {
-	my $the_end = '<h3><font color="red">LON-CAPA User Message</font></h3><br />'."\n";
+	my $the_end = '<h3><span class="LC_info">LON-CAPA User Message</span></h3><br />'."\n";
 	$the_end.='<b>Message: </b> No more students for this section or class.<br /><br />'."\n";
 	$the_end.='Click on the button below to return to the grading menu.<br /><br />'."\n";
-	$the_end.=&show_grading_menu_form ($symb,$url);
+	$the_end.=&show_grading_menu_form($symb);
 	$request->print($the_end);
     }
     return '';
@@ -1820,60 +2441,379 @@ sub processHandGrade {
 
 #---- Save the score and award for each student, if changed
 sub saveHandGrade {
-    my ($request,$url,$symb,$stuname,$domain,$newflg,$submitter) = @_;
+    my ($request,$symb,$stuname,$domain,$newflg,$submitter,$part) = @_;
+    my @version_parts;
     my $usec = &Apache::lonnet::getsection($domain,$stuname,
-					   $ENV{'request.course.id'});
+					   $env{'request.course.id'});
     if (!&canmodify($usec)) { return('not_allowed'); }
-    my %record     = &Apache::lonnet::restore($symb,$ENV{'request.course.id'},$domain,$stuname);
+    my %record = &Apache::lonnet::restore($symb,$env{'request.course.id'},$domain,$stuname);
+    my @parts_graded;
     my %newrecord  = ();
     my ($pts,$wgt) = ('','');
-    foreach (split(/:/,$ENV{'form.partlist'.$newflg})) {
-	my $dropMenu = $ENV{'form.GD_SEL'.$newflg.'_'.$_};
+    my %aggregate = ();
+    my $aggregateflag = 0;
+    my @parts = split(/:/,$env{'form.partlist'.$newflg});
+    foreach my $new_part (@parts) {
+	#collaborator ($submi may vary for different parts
+	if ($submitter && $new_part ne $part) { next; }
+	my $dropMenu = $env{'form.GD_SEL'.$newflg.'_'.$new_part};
 	if ($dropMenu eq 'excused') {
-	    if ($record{'resource.'.$_.'.solved'} ne 'excused') {
-		$newrecord{'resource.'.$_.'.solved'} = 'excused';
-		if (exists($record{'resource.'.$_.'.awarded'})) {
-		    $newrecord{'resource.'.$_.'.awarded'} = '';
+	    if ($record{'resource.'.$new_part.'.solved'} ne 'excused') {
+		$newrecord{'resource.'.$new_part.'.solved'} = 'excused';
+		if (exists($record{'resource.'.$new_part.'.awarded'})) {
+		    $newrecord{'resource.'.$new_part.'.awarded'} = '';
 		}
-	    $newrecord{'resource.'.$_.'.regrader'}="$ENV{'user.name'}:$ENV{'user.domain'}";
+	        $newrecord{'resource.'.$new_part.'.regrader'}="$env{'user.name'}:$env{'user.domain'}";
 	    }
 	} elsif ($dropMenu eq 'reset status'
-		 && exists($record{'resource.'.$_.'.solved'})) { #don't bother if no old records -> no attempts
-	    $newrecord{'resource.'.$_.'.tries'} = 0;
-	    $newrecord{'resource.'.$_.'.solved'} = '';
-	    $newrecord{'resource.'.$_.'.award'} = '';
-	    $newrecord{'resource.'.$_.'.awarded'} = 0;
-	    $newrecord{'resource.'.$_.'.regrader'}="$ENV{'user.name'}:$ENV{'user.domain'}";
+		 && exists($record{'resource.'.$new_part.'.solved'})) { #don't bother if no old records -> no attempts
+	    foreach my $key (keys (%record)) {
+		if ($key=~/^resource\.\Q$new_part\E\./) { $newrecord{$key} = ''; }
+	    }
+	    $newrecord{'resource.'.$new_part.'.regrader'}=
+		"$env{'user.name'}:$env{'user.domain'}";
+            my $totaltries = $record{'resource.'.$part.'.tries'};
+
+            my %last_resets = &get_last_resets($symb,$env{'request.course.id'},
+					       [$new_part]);
+            my $aggtries =$totaltries;
+            if ($last_resets{$new_part}) {
+                $aggtries = &get_num_tries(\%record,$last_resets{$new_part},
+					   $new_part);
+            }
+
+            my $solvedstatus = $record{'resource.'.$new_part.'.solved'};
+            if ($aggtries > 0) {
+                &decrement_aggs($symb,$new_part,\%aggregate,$aggtries,$totaltries,$solvedstatus);
+                $aggregateflag = 1;
+            }
 	} elsif ($dropMenu eq '') {
-	    $pts = ($ENV{'form.GD_BOX'.$newflg.'_'.$_} ne '' ? 
-		    $ENV{'form.GD_BOX'.$newflg.'_'.$_} : 
-		    $ENV{'form.RADVAL'.$newflg.'_'.$_});
-	    return 'no_score' if ($pts eq '' && $ENV{'form.GD_SEL'.$newflg.'_'.$_} eq '');
-	    $wgt = $ENV{'form.WGT'.$newflg.'_'.$_} eq '' ? 1 : 
-		$ENV{'form.WGT'.$newflg.'_'.$_};
+	    $pts = ($env{'form.GD_BOX'.$newflg.'_'.$new_part} ne '' ? 
+		    $env{'form.GD_BOX'.$newflg.'_'.$new_part} : 
+		    $env{'form.RADVAL'.$newflg.'_'.$new_part});
+	    if ($pts eq '' && $env{'form.GD_SEL'.$newflg.'_'.$new_part} eq '') {
+		next;
+	    }
+	    $wgt = $env{'form.WGT'.$newflg.'_'.$new_part} eq '' ? 1 : 
+		$env{'form.WGT'.$newflg.'_'.$new_part};
 	    my $partial= $pts/$wgt;
-	    next if ($partial eq $record{'resource.'.$_.'.awarded'}); #do not update score for part if not changed.
-	    $newrecord{'resource.'.$_.'.awarded'}  = $partial 
-		if ($record{'resource.'.$_.'.awarded'} ne $partial);
-	    my $reckey = 'resource.'.$_.'.solved';
+	    if ($partial eq $record{'resource.'.$new_part.'.awarded'}) {
+		#do not update score for part if not changed.
+                &handback_files($request,$symb,$stuname,$domain,$newflg,$new_part,\%newrecord);
+		next;
+	    } else {
+	        push @parts_graded, $new_part;
+	    }
+	    if ($record{'resource.'.$new_part.'.awarded'} ne $partial) {
+		$newrecord{'resource.'.$new_part.'.awarded'}  = $partial;
+	    }
+	    my $reckey = 'resource.'.$new_part.'.solved';
 	    if ($partial == 0) {
-		$newrecord{$reckey} = 'incorrect_by_override' 
-		    if ($record{$reckey} ne 'incorrect_by_override');
+		if ($record{$reckey} ne 'incorrect_by_override') {
+		    $newrecord{$reckey} = 'incorrect_by_override';
+		}
 	    } else {
-		$newrecord{$reckey} = 'correct_by_override' 
-		    if ($record{$reckey} ne 'correct_by_override');
+		if ($record{$reckey} ne 'correct_by_override') {
+		    $newrecord{$reckey} = 'correct_by_override';
+		}
+	    }	    
+	    if ($submitter && 
+		($record{'resource.'.$new_part.'.submitted_by'} ne $submitter)) {
+		$newrecord{'resource.'.$new_part.'.submitted_by'} = $submitter;
+	    }
+	    $newrecord{'resource.'.$new_part.'.regrader'}=
+		"$env{'user.name'}:$env{'user.domain'}";
+	}
+	# unless problem has been graded, set flag to version the submitted files
+	unless ($record{'resource.'.$new_part.'.solved'} =~ /^correct_/  || 
+	        $record{'resource.'.$new_part.'.solved'} eq 'incorrect_by_override' ||
+	        $dropMenu eq 'reset status')
+	   {
+	    push (@version_parts,$new_part);
+	}
+    }
+    my $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $cnum = $env{'course.'.$env{'request.course.id'}.'.num'};
+
+    if (%newrecord) {
+        if (@version_parts) {
+            my @changed_keys = &version_portfiles(\%record, \@parts_graded, 
+                                $env{'request.course.id'}, $symb, $domain, $stuname, \@version_parts);
+	    @newrecord{@changed_keys} = @record{@changed_keys};
+	    foreach my $new_part (@version_parts) {
+		&handback_files($request,$symb,$stuname,$domain,$newflg,
+				$new_part,\%newrecord);
 	    }
-	    $newrecord{'resource.'.$_.'.submitted_by'} = $submitter 
-		if ($submitter && ($record{'resource.'.$_.'.submitted_by'} ne $submitter));
-	    $newrecord{'resource.'.$_.'.regrader'}="$ENV{'user.name'}:$ENV{'user.domain'}";
-	}
+        }
+	&Apache::lonnet::cstore(\%newrecord,$symb,
+				$env{'request.course.id'},$domain,$stuname);
+	&check_and_remove_from_queue(\@parts,\%record,\%newrecord,$symb,
+				     $cdom,$cnum,$domain,$stuname);
+    }
+    if ($aggregateflag) {
+        &Apache::lonnet::cinc('nohist_resourcetracker',\%aggregate,
+			      $cdom,$cnum);
+    }
+    return ('',$pts,$wgt);
+}
+
+sub check_and_remove_from_queue {
+    my ($parts,$record,$newrecord,$symb,$cdom,$cnum,$domain,$stuname) = @_;
+    my @ungraded_parts;
+    foreach my $part (@{$parts}) {
+	if (    $record->{   'resource.'.$part.'.awarded'} eq ''
+	     && $record->{   'resource.'.$part.'.solved' } ne 'excused'
+	     && $newrecord->{'resource.'.$part.'.awarded'} eq ''
+	     && $newrecord->{'resource.'.$part.'.solved' } ne 'excused'
+		) {
+	    push(@ungraded_parts, $part);
+	}
+    }
+    if ( !@ungraded_parts ) {
+	&Apache::bridgetask::remove_from_queue('gradingqueue',$symb,$cdom,
+					       $cnum,$domain,$stuname);
+    }
+}
+
+sub handback_files {
+    my ($request,$symb,$stuname,$domain,$newflg,$new_part,$newrecord) = @_;
+    my $portfolio_root = &propath($domain,$stuname).'/userfiles/portfolio';
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
+
+    my @part_response_id = &flatten_responseType($responseType);
+    foreach my $part_response_id (@part_response_id) {
+    	my ($part_id,$resp_id) = @{ $part_response_id };
+	my $part_resp = join('_',@{ $part_response_id });
+            if (($env{'form.'.$newflg.'_'.$part_resp.'_returndoc1'}) && ($new_part == $part_id)) {
+                # if multiple files are uploaded names will be 'returndoc2','returndoc3'
+                my $file_counter = 1;
+		my $file_msg;
+                while ($env{'form.'.$newflg.'_'.$part_resp.'_returndoc'.$file_counter}) {
+                    my $fname=$env{'form.'.$newflg.'_'.$part_resp.'_returndoc'.$file_counter.'.filename'};
+                    my ($directory,$answer_file) = 
+                        ($env{'form.'.$newflg.'_'.$part_resp.'_origdoc'.$file_counter} =~ /^(.*?)([^\/]*)$/);
+                    my ($answer_name,$answer_ver,$answer_ext) =
+		        &file_name_version_ext($answer_file);
+		    my ($portfolio_path) = ($directory =~ /^.+$stuname\/portfolio(.*)/);
+		    my @dir_list = &Apache::lonnet::dirlist($portfolio_path,$domain,$stuname,$portfolio_root);
+		    my $version = &get_next_version($answer_name, $answer_ext, \@dir_list);
+                    # fix file name
+                    my ($save_file_name) = (($directory.$answer_name.".$version.".$answer_ext) =~ /^.+\/${stuname}\/(.*)/);
+                    my $result=&Apache::lonnet::finishuserfileupload($stuname,$domain,
+            	                                $newflg.'_'.$part_resp.'_returndoc'.$file_counter,
+            	                                $save_file_name);
+                    if ($result !~ m|^/uploaded/|) {
+                        $request->print('<span class="LC_error">An error occurred ('.$result.
+                        ') while trying to upload '.$newflg.'_'.$part_resp.'_returndoc'.$file_counter.'</span><br />');
+                    } else {
+                        # mark the file as read only
+                        my @files = ($save_file_name);
+                        my @what = ($symb,$env{'request.course.id'},'handback');
+                        &Apache::lonnet::mark_as_readonly($domain,$stuname,\@files,\@what);
+			if (exists($$newrecord{"resource.$new_part.$resp_id.handback"})) {
+			    $$newrecord{"resource.$new_part.$resp_id.handback"}.=',';
+			}
+                        $$newrecord{"resource.$new_part.$resp_id.handback"} .= $save_file_name;
+			$file_msg.= "\n".'<br /><span class="LC_filename"><a href="/uploaded/'."$domain/$stuname/".$save_file_name.'">'.$save_file_name."</a></span><br />";
+
+                    }
+                    $request->print("<br />".$fname." will be the uploaded file name");
+                    $request->print(" ".$env{'form.'.$newflg.'_'.$part_resp.'_origdoc'.$file_counter});
+                    $file_counter++;
+                }
+		my $subject = "File Handed Back by Instructor ";
+		my $message = "A file has been returned that was originally submitted in reponse to: <br />";
+		$message .= "<strong>".&Apache::lonnet::gettitle($symb)."</strong><br />";
+		$message .= ' The returned file(s) are named: '. $file_msg;
+		$message .= " and can be found in your portfolio space.";
+		my ($feedurl,$showsymb) = 
+		    &get_feedurl_and_symb($symb,$domain,$stuname);
+                my $restitle = &Apache::lonnet::gettitle($symb);
+		my $msgstatus = 
+                   &Apache::lonmsg::user_normal_msg($stuname,$domain,$subject.
+			 ' (File Returned) ['.$restitle.']',$message,undef,
+                         $feedurl,undef,undef,undef,$showsymb,$restitle);
+            }
+        }
+    return;
+}
+
+sub get_feedurl_and_symb {
+    my ($symb,$uname,$udom) = @_;
+    my (undef,undef,$url) = &Apache::lonnet::decode_symb($symb);
+    $url = &Apache::lonnet::clutter($url);
+    my $encrypturl=&Apache::lonnet::EXT('resource.0.encrypturl',
+					$symb,$udom,$uname);
+    if ($encrypturl =~ /^yes$/i) {
+	&Apache::lonenc::encrypted(\$url,1);
+	&Apache::lonenc::encrypted(\$symb,1);
+    }
+    return ($url,$symb);
+}
+
+sub get_submitted_files {
+    my ($udom,$uname,$partid,$respid,$record) = @_;
+    my @files;
+    if ($$record{"resource.$partid.$respid.portfiles"}) {
+        my $file_url = '/uploaded/'.$udom.'/'.$uname.'/portfolio';
+        foreach my $file (split(',',$$record{"resource.$partid.$respid.portfiles"})) {
+    	    push(@files,$file_url.$file);
+        }
     }
+    if ($$record{"resource.$partid.$respid.uploadedurl"}) {
+        push(@files,$$record{"resource.$partid.$respid.uploadedurl"});
+    }
+    return (\@files);
+}
 
-    if (scalar(keys(%newrecord)) > 0) {
-	&Apache::lonnet::cstore(\%newrecord,$symb,
-				$ENV{'request.course.id'},$domain,$stuname);
+# ----------- Provides number of tries since last reset.
+sub get_num_tries {
+    my ($record,$last_reset,$part) = @_;
+    my $timestamp = '';
+    my $num_tries = 0;
+    if ($$record{'version'}) {
+        for (my $version=$$record{'version'};$version>=1;$version--) {
+            if (exists($$record{$version.':resource.'.$part.'.solved'})) {
+                $timestamp = $$record{$version.':timestamp'};
+                if ($timestamp > $last_reset) {
+                    $num_tries ++;
+                } else {
+                    last;
+                }
+            }
+        }
+    }
+    return $num_tries;
+}
+
+# ----------- Determine decrements required in aggregate totals 
+sub decrement_aggs {
+    my ($symb,$part,$aggregate,$aggtries,$totaltries,$solvedstatus) = @_;
+    my %decrement = (
+                        attempts => 0,
+                        users => 0,
+                        correct => 0
+                    );
+    $decrement{'attempts'} = $aggtries;
+    if ($solvedstatus =~ /^correct/) {
+        $decrement{'correct'} = 1;
+    }
+    if ($aggtries == $totaltries) {
+        $decrement{'users'} = 1;
     }
-    return '',$pts,$wgt;
+    foreach my $type (keys (%decrement)) {
+        $$aggregate{$symb."\0".$part."\0".$type} = -$decrement{$type};
+    }
+    return;
+}
+
+# ----------- Determine timestamps for last reset of aggregate totals for parts  
+sub get_last_resets {
+    my ($symb,$courseid,$partids) =@_;
+    my %last_resets;
+    my $cdom = $env{'course.'.$courseid.'.domain'};
+    my $cname = $env{'course.'.$courseid.'.num'};
+    my @keys;
+    foreach my $part (@{$partids}) {
+	push(@keys,"$symb\0$part\0resettime");
+    }
+    my %results=&Apache::lonnet::get('nohist_resourcetracker',\@keys,
+				     $cdom,$cname);
+    foreach my $part (@{$partids}) {
+	$last_resets{$part}=$results{"$symb\0$part\0resettime"};
+    }
+    return %last_resets;
+}
+
+# ----------- Handles creating versions for portfolio files as answers
+sub version_portfiles {
+    my ($record, $parts_graded, $courseid, $symb, $domain, $stu_name, $v_flag) = @_;
+    my $version_parts = join('|',@$v_flag);
+    my @returned_keys;
+    my $parts = join('|', @$parts_graded);
+    my $portfolio_root = &propath($domain,$stu_name).
+	'/userfiles/portfolio';
+    foreach my $key (keys(%$record)) {
+        my $new_portfiles;
+        if ($key =~ /^resource\.($version_parts)\./ && $key =~ /\.portfiles$/ ) {
+            my @versioned_portfiles;
+            my @portfiles = split(/\s*,\s*/,$$record{$key});
+            foreach my $file (@portfiles) {
+                &Apache::lonnet::unmark_as_readonly($domain,$stu_name,[$symb,$env{'request.course.id'}],$file);
+                my ($directory,$answer_file) =($file =~ /^(.*?)([^\/]*)$/);
+		my ($answer_name,$answer_ver,$answer_ext) =
+		    &file_name_version_ext($answer_file);
+                my @dir_list = &Apache::lonnet::dirlist($directory,$domain,$stu_name,$portfolio_root);
+                my $version = &get_next_version($answer_name, $answer_ext, \@dir_list);
+                my $new_answer = &version_selected_portfile($domain, $stu_name, $directory, $answer_file, $version);
+                if ($new_answer ne 'problem getting file') {
+                    push(@versioned_portfiles, $directory.$new_answer);
+                    &Apache::lonnet::mark_as_readonly($domain,$stu_name,
+                        [$directory.$new_answer],
+                        [$symb,$env{'request.course.id'},'graded']);
+                }
+            }
+            $$record{$key} = join(',',@versioned_portfiles);
+            push(@returned_keys,$key);
+        }
+    } 
+    return (@returned_keys);   
+}
+
+sub get_next_version {
+    my ($answer_name, $answer_ext, $dir_list) = @_;
+    my $version;
+    foreach my $row (@$dir_list) {
+        my ($file) = split(/\&/,$row,2);
+        my ($file_name,$file_version,$file_ext) =
+	    &file_name_version_ext($file);
+        if (($file_name eq $answer_name) && 
+	    ($file_ext eq $answer_ext)) {
+                # gets here if filename and extension match, regardless of version
+                if ($file_version ne '') {
+                # a versioned file is found  so save it for later
+                if ($file_version > $version) {
+		    $version = $file_version;
+	        }
+            }
+        }
+    } 
+    $version ++;
+    return($version);
+}
+
+sub version_selected_portfile {
+    my ($domain,$stu_name,$directory,$file_name,$version) = @_;
+    my ($answer_name,$answer_ver,$answer_ext) =
+        &file_name_version_ext($file_name);
+    my $new_answer;
+    $env{'form.copy'} = &Apache::lonnet::getfile("/uploaded/$domain/$stu_name/portfolio$directory$file_name");
+    if($env{'form.copy'} eq '-1') {
+        &Apache::lonnet::logthis('problem getting file '.$file_name);
+        $new_answer = 'problem getting file';
+    } else {
+        $new_answer = $answer_name.'.'.$version.'.'.$answer_ext;
+        my $copy_result = &Apache::lonnet::finishuserfileupload(
+                            $stu_name,$domain,'copy',
+		        '/portfolio'.$directory.$new_answer);
+    }    
+    return ($new_answer);
+}
+
+sub file_name_version_ext {
+    my ($file)=@_;
+    my @file_parts = split(/\./, $file);
+    my ($name,$version,$ext);
+    if (@file_parts > 1) {
+	$ext=pop(@file_parts);
+	if (@file_parts > 1 && $file_parts[-1] =~ /^\d+$/) {
+	    $version=pop(@file_parts);
+	}
+	$name=join('.',@file_parts);
+    } else {
+	$name=join('.',@file_parts);
+    }
+    return($name,$version,$ext);
 }
 
 #--------------------------------------------------------------------------------------
@@ -1925,6 +2865,7 @@ sub viewgrades_js {
 	}
 	for (i=0;i<document.classgrade.total.value;i++) {
 	    var user = document.classgrade["ctr"+i].value;
+	    user = user.replace(new RegExp(':', 'g'),"_");
 	    var scorename = document.classgrade["GD_"+user+"_"+partid+"_awarded"];
 	    var saveval   = document.classgrade["GD_"+user+"_"+partid+"_solved_s"].value;
 	    var selname   = document.classgrade["GD_"+user+"_"+partid+"_solved"];
@@ -1941,6 +2882,7 @@ sub viewgrades_js {
     function writeRadText(partid,weight) {
 	var selval   = document.classgrade["SELVAL_"+partid];
 	var radioButton = document.classgrade["RADVAL_"+partid];
+        var override = document.classgrade["FORCE_"+partid].checked;
 	var textbox = document.classgrade["TEXTVAL_"+partid];
 	if (selval[1].selected || selval[2].selected) {
 	    for (var i=0; i<radioButton.length; i++) {
@@ -1951,10 +2893,11 @@ sub viewgrades_js {
 
 	    for (i=0;i<document.classgrade.total.value;i++) {
 		var user = document.classgrade["ctr"+i].value;
+		user = user.replace(new RegExp(':', 'g'),"_");
 		var scorename = document.classgrade["GD_"+user+"_"+partid+"_awarded"];
 		var saveval   = document.classgrade["GD_"+user+"_"+partid+"_solved_s"].value;
 		var selname   = document.classgrade["GD_"+user+"_"+partid+"_solved"];
-		if (saveval != "correct") {
+		if ((saveval != "correct") || override) {
 		    scorename.value = "";
 		    if (selval[1].selected) {
 			selname[1].selected = true;
@@ -1968,10 +2911,11 @@ sub viewgrades_js {
 	} else {
 	    for (i=0;i<document.classgrade.total.value;i++) {
 		var user = document.classgrade["ctr"+i].value;
+		user = user.replace(new RegExp(':', 'g'),"_");
 		var scorename = document.classgrade["GD_"+user+"_"+partid+"_awarded"];
 		var saveval   = document.classgrade["GD_"+user+"_"+partid+"_solved_s"].value;
 		var selname   = document.classgrade["GD_"+user+"_"+partid+"_solved"];
-		if (saveval != "correct") {
+		if ((saveval != "correct") || override) {
 		    scorename.value = document.classgrade["GD_"+user+"_"+partid+"_awarded_s"].value;
 		    selname[0].selected = true;
 		}
@@ -2008,7 +2952,7 @@ sub viewgrades_js {
 	    if (selval[2].selected) {
 		document.classgrade["GD_"+user+'_'+partid+"_tries"].value = "0";
 	    }
-	}
+        }
     }
 
     function resetEntry(numpart) {
@@ -2026,6 +2970,7 @@ sub viewgrades_js {
 
 	    for (i=0;i<document.classgrade.total.value;i++) {
 		var user = document.classgrade["ctr"+i].value;
+		user = user.replace(new RegExp(':', 'g'),"_");
 		var resetscore = document.classgrade["GD_"+user+"_"+partid+"_awarded"];
 		resetscore.value = document.classgrade["GD_"+user+"_"+partid+"_awarded_s"].value;
 		var resettries = document.classgrade["GD_"+user+"_"+partid+"_tries"];
@@ -2050,47 +2995,56 @@ sub viewgrades {
     my ($request) = shift;
     &viewgrades_js($request);
 
-    my ($symb,$url) = ($ENV{'form.symb'},$ENV{'form.url'}); 
-    my $result='<h3><font color="#339933">Manual Grading</font></h3>';
+    my ($symb) = &get_symb($request);
+    #need to make sure we have the correct data for later EXT calls, 
+    #thus invalidate the cache
+    &Apache::lonnet::devalidatecourseresdata(
+                 $env{'course.'.$env{'request.course.id'}.'.num'},
+                 $env{'course.'.$env{'request.course.id'}.'.domain'});
+    &Apache::lonnet::clear_EXT_cache_status();
 
-    $result.='<font size=+1><b>Current Resource: </b>'.$ENV{'form.probTitle'}.'</font>'."\n";
+    my $result='<h3><span class="LC_info">'.&mt('Manual Grading').'</span></h3>';
+    $result.='<h4><b>Current Resource: </b>'.$env{'form.probTitle'}.'</h4>'."\n";
 
     #view individual student submission form - called using Javascript viewOneStudent
-    $result.=&jscriptNform($url,$symb);
+    $result.=&jscriptNform($symb);
 
     #beginning of class grading form
+    my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
     $result.= '<form action="/adm/grades" method="post" name="classgrade">'."\n".
-	'<input type="hidden" name="symb"    value="'.$symb.'" />'."\n".
-	'<input type="hidden" name="url"     value="'.$url.'" />'."\n".
+	'<input type="hidden" name="symb"    value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
 	'<input type="hidden" name="command" value="editgrades" />'."\n".
-	'<input type="hidden" name="section" value="'.$ENV{'form.section'}.'" />'."\n".
-	'<input type="hidden" name="saveState" value="'.$ENV{'form.saveState'}.'" />'."\n".
-	'<input type="hidden" name="Status" value="'.$ENV{'form.Status'}.'" />'."\n".
-	'<input type="hidden" name="probTitle" value="'.$ENV{'form.probTitle'}.'" />'."\n";
+	&build_section_inputs().
+	'<input type="hidden" name="saveState" value="'.$env{'form.saveState'}.'" />'."\n".
+	'<input type="hidden" name="Status" value="'.$env{'stu_status'}.'" />'."\n".
+	'<input type="hidden" name="probTitle" value="'.$env{'form.probTitle'}.'" />'."\n";
 
     my $sectionClass;
-    if ($ENV{'form.section'} eq 'all') {
+    my $section_display = join (", ",&Apache::loncommon::get_env_multiple('form.section'));
+    if ($env{'form.section'} eq 'all') {
 	$sectionClass='Class </h3>';
-    } elsif ($ENV{'form.section'} eq 'no') {
-	$sectionClass='Students in no Section </h3>';
+    } elsif ($env{'form.section'} eq 'none') {
+	$sectionClass=&mt('Students in no Section').'</h3>';
     } else {
-	$sectionClass='Students in Section '.$ENV{'form.section'}.'</h3>';
+	$sectionClass=&mt('Students in Section(s) [_1]',$section_display).'</h3>';
     }
-    $result.='<h3>Assign Common Grade To '.$sectionClass;
+    $result.='<h3>'.&mt('Assign Common Grade To [_1]',$sectionClass);
     $result.= '<table border=0><tr><td bgcolor="#777777">'."\n".
 	'<table border=0><tr bgcolor="#ffffdd"><td>';
     #radio buttons/text box for assigning points for a section or class.
     #handles different parts of a problem
-    my ($partlist,$handgrade) = &response_type($url,$symb);
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
     my %weight = ();
     my $ctsparts = 0;
     $result.='<table border="0">';
     my %seen = ();
-    for (sort keys(%$handgrade)) {
-	my ($partid,$respid) = split (/_/,$_,2);
+    my @part_response_id = &flatten_responseType($responseType);
+    foreach my $part_response_id (@part_response_id) {
+    	my ($partid,$respid) = @{ $part_response_id };
+	my $part_resp = join('_',@{ $part_response_id });
 	next if $seen{$partid};
 	$seen{$partid}++;
-	my ($responsetype,$handgrade)=split(/:/,$$handgrade{$_});
+	my $handgrade=$$handgrade{$part_resp};
 	my $wgt = &Apache::lonnet::EXT('resource.'.$partid.'.weight',$symb);
 	$weight{$partid} = $wgt eq '' ? '1' : $wgt;
 
@@ -2098,13 +3052,14 @@ sub viewgrades {
 	    $ctsparts.'" value="'.$partid.'" />'."\n";
 	$result.='<input type="hidden" name="weight_'.
 	    $partid.'" value="'.$weight{$partid}.'" />'."\n";
-	$result.='<tr><td><b>Part  '.$partid.'&nbsp; &nbsp;Point:</b> </td><td>';
+	my $display_part=&get_display_part($partid,$symb);
+	$result.='<tr><td><b>Part:</b> '.$display_part.'&nbsp; &nbsp;<b>Point:</b> </td><td>';
 	$result.='<table border="0"><tr>';  
 	my $ctr = 0;
 	while ($ctr<=$weight{$partid}) { # display radio buttons in a nice table 10 across
-	    $result.= '<td><input type="radio" name="RADVAL_'.$partid.'" '.
+	    $result.= '<td><label><input type="radio" name="RADVAL_'.$partid.'" '.
 		'onclick="javascript:writePoint(\''.$partid.'\','.$weight{$partid}.
-		','.$ctr.')" />'.$ctr."</td>\n";
+		','.$ctr.')" />'.$ctr."</label></td>\n";
 	    $result.=(($ctr+1)%10 == 0 ? '</tr><tr>' : '');
 	    $ctr++;
 	}
@@ -2116,15 +3071,16 @@ sub viewgrades {
 	$result.= '</td><td><select name="SELVAL_'.$partid.'"'.
 	    'onChange="javascript:writeRadText(\''.$partid.'\','.
 		$weight{$partid}.')"> '.
-	    '<option selected="on"> </option>'.
+	    '<option selected="selected"> </option>'.
 	    '<option>excused</option>'.
-	    '<option>reset status</option></select></td></tr>'."\n";
+	    '<option>reset status</option></select></td>'.
+            '<td><label><input type="checkbox" name="FORCE_'.$partid.'" /> Override "Correct"</label></td></tr>'."\n";
 	$ctsparts++;
     }
     $result.='</table>'.'</td></tr></table>'.'</td></tr></table>'."\n".
 	'<input type="hidden" name="totalparts" value="'.$ctsparts.'" />';
-    $result.='<input type="button" value="Reset" '.
-	'onClick="javascript:resetEntry('.$ctsparts.');" TARGET=_self>';
+    $result.='<input type="button" value="Revert to Default" '.
+	'onClick="javascript:resetEntry('.$ctsparts.');" target="_self" />';
 
     #table listing all the students in a section/class
     #header of table
@@ -2132,65 +3088,100 @@ sub viewgrades {
     $result.= '<table border=0><tr><td bgcolor="#777777">'."\n".
 	'<table border=0><tr bgcolor="#deffff"><td>&nbsp;<b>No.</b>&nbsp;</td>'.
 	'<td>'.&nameUserString('header')."</td>\n";
-    my (@parts) = sort(&getpartlist($url));
+    my (@parts) = sort(&getpartlist($symb));
+    my (undef,undef,$url)=&Apache::lonnet::decode_symb($symb);
+    my @partids = ();
     foreach my $part (@parts) {
 	my $display=&Apache::lonnet::metadata($url,$part.'.display');
 	$display =~ s|^Number of Attempts|Tries<br />|; # makes the column narrower
 	if  (!$display) { $display = &Apache::lonnet::metadata($url,$part.'.name'); }
+	my ($partid) = &split_part_type($part);
+        push(@partids, $partid);
+	my $display_part=&get_display_part($partid,$symb);
 	if ($display =~ /^Partial Credit Factor/) {
-	    my ($partid) = &split_part_type($part);
-	    $result.='<td><b>Score Part '.$partid.'<br />(weight = '.
-		$weight{$partid}.')</b></td>'."\n";
+	    $result.='<td><b>Score Part:</b> '.$display_part.
+		' <br /><b>(weight = '.$weight{$partid}.')</b></td>'."\n";
 	    next;
+	} else {
+	    $display =~s/\[Part: \Q$partid\E\]/Part:<\/b> $display_part/;
 	}
 	$display =~ s|Problem Status|Grade Status<br />|;
-	$result.='<td><b>'.$display.'</b></td>'."\n";
+	$result.='<td><b>'.$display.'</td>'."\n";
     }
     $result.='</tr>';
 
+    my %last_resets = 
+	&get_last_resets($symb,$env{'request.course.id'},\@partids);
+
     #get info for each student
     #list all the students - with points and grade status
-    my (undef,undef,$fullname) = &getclasslist($ENV{'form.section'},'1');
+    my (undef,undef,$fullname) = &getclasslist($env{'form.section'},'1');
     my $ctr = 0;
-    foreach (sort {lc($$fullname{$a}) cmp lc($$fullname{$b}) } keys %$fullname) {
-	my $uname = $_;
-	$uname=~s/:/_/;
-	$result.='<input type="hidden" name="ctr'.$ctr.'" value="'.$uname.'" />'."\n";
+    foreach (sort 
+	     {
+		 if (lc($$fullname{$a}) ne lc($$fullname{$b})) {
+		     return (lc($$fullname{$a}) cmp lc($$fullname{$b}));
+		 }
+		 return $a cmp $b;
+	     } (keys(%$fullname))) {
 	$ctr++;
-	$result.=&viewstudentgrade($url,$symb,$ENV{'request.course.id'},
-				   $_,$$fullname{$_},\@parts,\%weight,$ctr);
+	$result.=&viewstudentgrade($symb,$env{'request.course.id'},
+				   $_,$$fullname{$_},\@parts,\%weight,$ctr,\%last_resets);
     }
     $result.='</table></td></tr></table>';
     $result.='<input type="hidden" name="total" value="'.$ctr.'" />'."\n";
     $result.='<input type="button" value="Save" '.
-	'onClick="javascript:submit();" TARGET=_self /></form>'."\n";
+	'onClick="javascript:submit();" target="_self" /></form>'."\n";
     if (scalar(%$fullname) eq 0) {
 	my $colspan=3+scalar(@parts);
-	$result='<font color="red">There are no students in section "'.$ENV{'form.section'}.
-	    '" with enrollment status "'.$ENV{'form.Status'}.'" to modify or grade.</font>';
+	my $section_display = join (", ",&Apache::loncommon::get_env_multiple('form.section'));
+        my $stu_status = join(' or ',&Apache::loncommon::get_env_multiple('form.Status'));
+	$result='<span class="LC_warning">'.
+	    &mt('There are no students in section(s) [_1] with enrollment status [_2] to modify or grade',
+	        $section_display, $stu_status).
+	    '</span>';
     }
-    $result.=&show_grading_menu_form($symb,$url);
+    $result.=&show_grading_menu_form($symb);
     return $result;
 }
 
 #--- call by previous routine to display each student
 sub viewstudentgrade {
-    my ($url,$symb,$courseid,$student,$fullname,$parts,$weight,$ctr) = @_;
+    my ($symb,$courseid,$student,$fullname,$parts,$weight,$ctr,$last_resets) = @_;
     my ($uname,$udom) = split(/:/,$student);
-    $student=~s/:/_/;
     my %record=&Apache::lonnet::restore($symb,$courseid,$udom,$uname);
-    my $result='<tr bgcolor="#ffffdd"><td align="right">'.$ctr.'&nbsp;</td><td>&nbsp;'.
+    my %aggregates = (); 
+    my $result='<tr bgcolor="#ffffdd"><td align="right">'.
+	'<input type="hidden" name="ctr'.($ctr-1).'" value="'.$student.'" />'.
+	"\n".$ctr.'&nbsp;</td><td>&nbsp;'.
 	'<a href="javascript:viewOneStudent(\''.$uname.'\',\''.$udom.
-	'\')"; TARGET=_self>'.$fullname.'</a> '.
-	'<font color="#999999">('.$uname.($ENV{'user.domain'} eq $udom ? '' : ':'.$udom).')</font></td>'."\n";
+	'\');" target="_self">'.$fullname.'</a> '.
+	'<span class="LC_internal_info">('.$uname.($env{'user.domain'} eq $udom ? '' : ':'.$udom).')</span></td>'."\n";
+    $student=~s/:/_/; # colon doen't work in javascript for names
     foreach my $apart (@$parts) {
 	my ($part,$type) = &split_part_type($apart);
 	my $score=$record{"resource.$part.$type"};
+        $result.='<td align="center">';
+        my ($aggtries,$totaltries);
+        unless (exists($aggregates{$part})) {
+	    $totaltries = $record{'resource.'.$part.'.tries'};
+
+	    $aggtries = $totaltries;
+            if ($$last_resets{$part}) {  
+                $aggtries = &get_num_tries(\%record,$$last_resets{$part},
+					   $part);
+            }
+            $result.='<input type="hidden" name="'.
+                'GD_'.$student.'_'.$part.'_aggtries" value="'.$aggtries.'" />'."\n";
+            $result.='<input type="hidden" name="'.
+                'GD_'.$student.'_'.$part.'_totaltries" value="'.$totaltries.'" />'."\n";
+            $aggregates{$part} = 1;
+        }
 	if ($type eq 'awarded') {
-	    my $pts = $score eq '' ? '' : $score*$$weight{$part};
+	    my $pts = $score eq '' ? '' : &compute_points($score,$$weight{$part});
 	    $result.='<input type="hidden" name="'.
 		'GD_'.$student.'_'.$part.'_awarded_s" value="'.$pts.'" />'."\n";
-	    $result.='<td align="middle"><input type="text" name="'.
+	    $result.='<input type="text" name="'.
 		'GD_'.$student.'_'.$part.'_awarded" '.
 		'onChange="javascript:changeSelect(\''.$part.'\',\''.$student.
 		'\')" value="'.$pts.'" size="4" /></td>'."\n";
@@ -2199,18 +3190,18 @@ sub viewstudentgrade {
 	    $status = 'nothing' if ($status eq '');
 	    $result.='<input type="hidden" name="'.'GD_'.$student.'_'.
 		$part.'_solved_s" value="'.$status.'" />'."\n";
-	    $result.='<td align="middle">&nbsp;<select name="'.
+	    $result.='&nbsp;<select name="'.
 		'GD_'.$student.'_'.$part.'_solved" '.
 		'onChange="javascript:changeOneScore(\''.$part.'\',\''.$student.'\')" >'."\n";
-	    $result.= (($status eq 'excused') ? '<option> </option><option selected="on">excused</option>' 
-		: '<option selected="on"> </option><option>excused</option>')."\n";
+	    $result.= (($status eq 'excused') ? '<option> </option><option selected="selected">excused</option>' 
+		: '<option selected="selected"> </option><option>excused</option>')."\n";
 	    $result.='<option>reset status</option>';
 	    $result.="</select>&nbsp;</td>\n";
 	} else {
 	    $result.='<input type="hidden" name="'.
 		'GD_'.$student.'_'.$part.'_'.$type.'_s" value="'.$score.'" />'.
 		    "\n";
-	    $result.='<td align="middle"><input type="text" name="'.
+	    $result.='<input type="text" name="'.
 		'GD_'.$student.'_'.$part.'_'.$type.'" '.
 		'value="'.$score.'" size="4" /></td>'."\n";
 	}
@@ -2224,11 +3215,11 @@ sub viewstudentgrade {
 sub editgrades {
     my ($request) = @_;
 
-    my $symb=$ENV{'form.symb'};
-    my $url =$ENV{'form.url'};
-    my $title='<h3><font color="#339933">Current Grade Status</font></h3>';
-    $title.='<font size=+1><b>Current Resource: </b>'.$ENV{'form.probTitle'}.'</font><br />'."\n";
-    $title.='<font size=+1><b>Section: </b>'.$ENV{'form.section'}.'</font>'."\n";
+    my $symb=&get_symb($request);
+    my $section_display = join (", ",&Apache::loncommon::get_env_multiple('form.section'));
+    my $title='<h3><span class="LC_info">'.&mt('Current Grade Status').'</span></h3>';
+    $title.='<h4>'.&mt('<b>Current Resource: </b>[_1]',$env{'form.probTitle'}).'</h4><br />'."\n";
+    $title.='<h4>'.&mt('<b>Section: </b>[_1]',$section_display).'</h4>'."\n";
 
     my $result= '<table border="0"><tr><td bgcolor="#777777">'."\n";
     $result.= '<table border="0"><tr bgcolor="#deffff">'.
@@ -2242,21 +3233,22 @@ sub editgrades {
 		    'ungraded' =>'ungraded_attempted',
 		    'nothing'  => '',
 		    );
-    my ($classlist,undef,$fullname) = &getclasslist($ENV{'form.section'},'0');
+    my ($classlist,undef,$fullname) = &getclasslist($env{'form.section'},'0');
 
     my (@partid);
     my %weight = ();
     my %columns = ();
     my ($i,$ctr,$count,$rec_update) = (0,0,0,0);
 
-    my (@parts) = sort(&getpartlist($url));
+    my (@parts) = sort(&getpartlist($symb));
     my $header;
-    while ($ctr < $ENV{'form.totalparts'}) {
-	my $partid = $ENV{'form.partid_'.$ctr};
+    while ($ctr < $env{'form.totalparts'}) {
+	my $partid = $env{'form.partid_'.$ctr};
 	push @partid,$partid;
-	$weight{$partid} = $ENV{'form.weight_'.$partid};
+	$weight{$partid} = $env{'form.weight_'.$partid};
 	$ctr++;
     }
+    my (undef,undef,$url) = &Apache::lonnet::decode_symb($symb);
     foreach my $partid (@partid) {
 	$header .= '<td align="center">&nbsp;<b>Old Score</b>&nbsp;</td>'.
 	    '<td align="center">&nbsp;<b>New Score</b>&nbsp;</td>';
@@ -2274,9 +3266,10 @@ sub editgrades {
 	}
     }
     foreach my $partid (@partid) {
+	my $display_part=&get_display_part($partid,$symb);
 	$result .= '<td colspan="'.$columns{$partid}.
-	    '" align="center"><b>Part '.$partid.
-	    '</b> (Weight = '.$weight{$partid}.')</td>';
+	    '" align="center"><b>Part:</b> '.$display_part.
+	    ' (Weight = '.$weight{$partid}.')</td>';
 
     }
     $result .= '</tr><tr bgcolor="#deffff">';
@@ -2284,72 +3277,79 @@ sub editgrades {
     $result .= '</tr>'."\n";
     my $noupdate;
     my ($updateCtr,$noupdateCtr) = (1,1);
-    for ($i=0; $i<$ENV{'form.total'}; $i++) {
+    for ($i=0; $i<$env{'form.total'}; $i++) {
 	my $line;
-	my $user = $ENV{'form.ctr'.$i};
-	my $usercolon = $user;
-	$usercolon =~s/_/:/;
-	my ($uname,$udom)=split(/_/,$user);
+	my $user = $env{'form.ctr'.$i};
+	my ($uname,$udom)=split(/:/,$user);
 	my %newrecord;
 	my $updateflag = 0;
-	$line .= '<td>'.&nameUserString(undef,$$fullname{$usercolon},$uname,$udom).'</td>';
+	$line .= '<td>'.&nameUserString(undef,$$fullname{$user},$uname,$udom).'</td>';
 	my $usec=$classlist->{"$uname:$udom"}[5];
 	if (!&canmodify($usec)) {
 	    my $numcols=scalar(@partid)*4+2;
-	    $noupdate.=$line."<td colspan=\"$numcols\"><font color=\"red\">Not allowed to modify student</font></td></tr>";
+	    $noupdate.=$line."<td colspan=\"$numcols\"><span class=\"LC_warning\">Not allowed to modify student</span></td></tr>";
 	    next;
 	}
+        my %aggregate = ();
+        my $aggregateflag = 0;
+	$user=~s/:/_/; # colon doen't work in javascript for names
 	foreach (@partid) {
-	    my $old_aw    = $ENV{'form.GD_'.$user.'_'.$_.'_awarded_s'};
+	    my $old_aw    = $env{'form.GD_'.$user.'_'.$_.'_awarded_s'};
 	    my $old_part_pcr = $old_aw/($weight{$_} ne '0' ? $weight{$_}:1);
 	    my $old_part  = $old_aw eq '' ? '' : $old_part_pcr;
-	    my $old_score = $scoreptr{$ENV{'form.GD_'.$user.'_'.$_.'_solved_s'}};
-
-	    my $awarded   = $ENV{'form.GD_'.$user.'_'.$_.'_awarded'};
+	    my $old_score = $scoreptr{$env{'form.GD_'.$user.'_'.$_.'_solved_s'}};
+	    my $awarded   = $env{'form.GD_'.$user.'_'.$_.'_awarded'};
 	    my $pcr       = $awarded/($weight{$_} ne '0' ? $weight{$_} : 1);
 	    my $partial   = $awarded eq '' ? '' : $pcr;
 	    my $score;
 	    if ($partial eq '') {
-		$score = $scoreptr{$ENV{'form.GD_'.$user.'_'.$_.'_solved_s'}};
+		$score = $scoreptr{$env{'form.GD_'.$user.'_'.$_.'_solved_s'}};
 	    } elsif ($partial > 0) {
 		$score = 'correct_by_override';
 	    } elsif ($partial == 0) {
 		$score = 'incorrect_by_override';
 	    }
-	    my $dropMenu = $ENV{'form.GD_'.$user.'_'.$_.'_solved'};
+	    my $dropMenu = $env{'form.GD_'.$user.'_'.$_.'_solved'};
 	    $score = 'excused' if (($dropMenu eq 'excused') && ($score ne 'excused'));
 
+	    $newrecord{'resource.'.$_.'.regrader'}=
+		"$env{'user.name'}:$env{'user.domain'}";
 	    if ($dropMenu eq 'reset status' &&
 		$old_score ne '') { # ignore if no previous attempts => nothing to reset
-		$newrecord{'resource.'.$_.'.tries'} = 0;
+		$newrecord{'resource.'.$_.'.tries'} = '';
 		$newrecord{'resource.'.$_.'.solved'} = '';
 		$newrecord{'resource.'.$_.'.award'} = '';
-		$newrecord{'resource.'.$_.'.awarded'} = 0;
-		$newrecord{'resource.'.$_.'.regrader'}="$ENV{'user.name'}:$ENV{'user.domain'}";
+		$newrecord{'resource.'.$_.'.awarded'} = '';
 		$updateflag = 1;
+                if ($env{'form.GD_'.$user.'_'.$_.'_aggtries'} > 0) {
+                    my $aggtries = $env{'form.GD_'.$user.'_'.$_.'_aggtries'};
+                    my $totaltries = $env{'form.GD_'.$user.'_'.$_.'_totaltries'};
+                    my $solvedstatus = $env{'form.GD_'.$user.'_'.$_.'_solved_s'};
+                    &decrement_aggs($symb,$_,\%aggregate,$aggtries,$totaltries,$solvedstatus);
+                    $aggregateflag = 1;
+                }
+	    } elsif (!($old_part eq $partial && $old_score eq $score)) {
+		$updateflag = 1;
+		$newrecord{'resource.'.$_.'.awarded'}  = $partial if $partial ne '';
+		$newrecord{'resource.'.$_.'.solved'}   = $score;
+		$rec_update++;
 	    }
 
 	    $line .= '<td align="center">'.$old_aw.'&nbsp;</td>'.
 		'<td align="center">'.$awarded.
 		($score eq 'excused' ? $score : '').'&nbsp;</td>';
 
-	    if (!($old_part eq $partial && $old_score eq $score)) {
-		$updateflag = 1;
-		$newrecord{'resource.'.$_.'.awarded'}  = $partial if $partial ne '';
-		$newrecord{'resource.'.$_.'.solved'}   = $score;
-		$rec_update++;
-	    }
 
 	    my $partid=$_;
 	    foreach my $stores (@parts) {
 		my ($part,$type) = &split_part_type($stores);
 		if ($part !~ m/^\Q$partid\E/) { next;}
 		if ($type eq 'awarded' || $type eq 'solved') { next; }
-		my $old_aw    = $ENV{'form.GD_'.$user.'_'.$part.'_'.$type.'_s'};
-		my $awarded   = $ENV{'form.GD_'.$user.'_'.$part.'_'.$type};
+		my $old_aw    = $env{'form.GD_'.$user.'_'.$part.'_'.$type.'_s'};
+		my $awarded   = $env{'form.GD_'.$user.'_'.$part.'_'.$type};
 		if ($awarded ne '' && $awarded ne $old_aw) {
 		    $newrecord{'resource.'.$part.'.'.$type}= $awarded;
-		    $newrecord{'resource.'.$part.'.regrader'}="$ENV{'user.name'}:$ENV{'user.domain'}";
+		    $newrecord{'resource.'.$part.'.regrader'}="$env{'user.name'}:$env{'user.domain'}";
 		    $updateflag=1;
 		}
 		$line .= '<td align="center">'.$old_aw.'&nbsp;</td>'.
@@ -2357,27 +3357,59 @@ sub editgrades {
 	    }
 	}
 	$line.='</tr>'."\n";
+
+	my $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+	my $cnum = $env{'course.'.$env{'request.course.id'}.'.num'};
+
 	if ($updateflag) {
 	    $count++;
-	    &Apache::lonnet::cstore(\%newrecord,$symb,$ENV{'request.course.id'},
+	    &Apache::lonnet::cstore(\%newrecord,$symb,$env{'request.course.id'},
 				    $udom,$uname);
+
+	    if (&Apache::bridgetask::in_queue('gradingqueue',$symb,$cdom,
+					      $cnum,$udom,$uname)) {
+		# need to figure out if should be in queue.
+		my %record =  
+		    &Apache::lonnet::restore($symb,$env{'request.course.id'},
+					     $udom,$uname);
+		my $all_graded = 1;
+		my $none_graded = 1;
+		foreach my $part (@parts) {
+		    if ( $record{'resource.'.$part.'.awarded'} eq '' ) {
+			$all_graded = 0;
+		    } else {
+			$none_graded = 0;
+		    }
+		}
+
+		if ($all_graded || $none_graded) {
+		    &Apache::bridgetask::remove_from_queue('gradingqueue',
+							   $symb,$cdom,$cnum,
+							   $udom,$uname);
+		}
+	    }
+
 	    $result.='<tr bgcolor="#ffffde"><td align="right">&nbsp;'.$updateCtr.'&nbsp;</td>'.$line;
 	    $updateCtr++;
 	} else {
 	    $noupdate.='<tr bgcolor="#ffffde"><td align="right">&nbsp;'.$noupdateCtr.'&nbsp;</td>'.$line;
 	    $noupdateCtr++;
 	}
+        if ($aggregateflag) {
+            &Apache::lonnet::cinc('nohist_resourcetracker',\%aggregate,
+				  $cdom,$cnum);
+        }
     }
     if ($noupdate) {
 #	my $numcols=(scalar(@partid)*(scalar(@parts)-1)*2)+3;
 	my $numcols=scalar(@partid)*4+2;
-	$result .= '<tr bgcolor="#ffffff"><td align="center" colspan="'.$numcols.'">No Changes Occurred For the Students Below</td></tr>'.$noupdate;
+	$result .= '<tr bgcolor="#ffffff"><td align="center" colspan="'.$numcols.'">No Changes Occurred For the Students Below</td></tr><tr bgcolor="#ffffde">'.$noupdate;
     }
     $result .= '</table></td></tr></table>'."\n".
-	&show_grading_menu_form ($symb,$url);
+	&show_grading_menu_form ($symb);
     my $msg = '<br /><b>Number of records updated = '.$rec_update.
 	' for '.$count.' student'.($count <= 1 ? '' : 's').'.</b><br />'.
-	'<b>Total number of students = '.$ENV{'form.total'}.'</b><br />';
+	'<b>Total number of students = '.$env{'form.total'}.'</b><br />';
     return $title.$msg.$result;
 }
 
@@ -2385,7 +3417,7 @@ sub split_part_type {
     my ($partstr) = @_;
     my ($temp,@allparts)=split(/_/,$partstr);
     my $type=pop(@allparts);
-    my $part=join('.',@allparts);
+    my $part=join('_',@allparts);
     return ($part,$type);
 }
 
@@ -2400,24 +3432,26 @@ sub split_part_type {
 #
 #--- Javascript to handle csv upload
 sub csvupload_javascript_reverse_associate {
+    my $error1=&mt('You need to specify the username or ID');
+    my $error2=&mt('You need to specify at least one grading field');
   return(<<ENDPICK);
   function verify(vf) {
     var foundsomething=0;
     var founduname=0;
-    var founddomain=0;
+    var foundID=0;
     for (i=0;i<=vf.nfields.value;i++) {
       tw=eval('vf.f'+i+'.selectedIndex');
-      if (i==0 && tw!=0) { founduname=1; }
-      if (i==1 && tw!=0) { founddomain=1; }
-      if (i!=0 && i!=1 && tw!=0) { foundsomething=1; }
-    }
-    if (founduname==0 || founddomain==0) {
-      alert('You need to specify at both the username and domain');
-      return;
+      if (i==0 && tw!=0) { foundID=1; }
+      if (i==1 && tw!=0) { founduname=1; }
+      if (i!=0 && i!=1 && i!=2 && tw!=0) { foundsomething=1; }
+    }
+    if (founduname==0 && foundID==0) {
+	alert('$error1');
+	return;
     }
     if (foundsomething==0) {
-      alert('You need to specify at least one grading field');
-      return;
+	alert('$error2');
+	return;
     }
     vf.submit();
   }
@@ -2438,24 +3472,26 @@ ENDPICK
 }
 
 sub csvupload_javascript_forward_associate {
+    my $error1=&mt('You need to specify the username or ID');
+    my $error2=&mt('You need to specify at least one grading field');
   return(<<ENDPICK);
   function verify(vf) {
     var foundsomething=0;
     var founduname=0;
-    var founddomain=0;
+    var foundID=0;
     for (i=0;i<=vf.nfields.value;i++) {
       tw=eval('vf.f'+i+'.selectedIndex');
-      if (tw==1) { founduname=1; }
-      if (tw==2) { founddomain=1; }
-      if (tw>2) { foundsomething=1; }
-    }
-    if (founduname==0 || founddomain==0) {
-      alert('You need to specify at both the username and domain');
-      return;
+      if (tw==1) { foundID=1; }
+      if (tw==2) { founduname=1; }
+      if (tw>3) { foundsomething=1; }
+    }
+    if (founduname==0 && foundID==0) {
+	alert('$error1');
+	return;
     }
     if (foundsomething==0) {
-      alert('You need to specify at least one grading field');
-      return;
+	alert('$error2');
+	return;
     }
     vf.submit();
   }
@@ -2473,58 +3509,65 @@ ENDPICK
 }
 
 sub csvuploadmap_header {
-    my ($request,$symb,$url,$datatoken,$distotal)= @_;
+    my ($request,$symb,$datatoken,$distotal)= @_;
     my $javascript;
-    if ($ENV{'form.upfile_associate'} eq 'reverse') {
+    if ($env{'form.upfile_associate'} eq 'reverse') {
 	$javascript=&csvupload_javascript_reverse_associate();
     } else {
 	$javascript=&csvupload_javascript_forward_associate();
     }
 
-    my ($result) = &showResourceInfo($url,$ENV{'form.probTitle'});
-
+    my ($result) = &showResourceInfo($symb,$env{'form.probTitle'});
+    my $checked=(($env{'form.noFirstLine'})?' checked="checked"':'');
+    my $ignore=&mt('Ignore First Line');
+    $symb = &Apache::lonenc::check_encrypt($symb);
     $request->print(<<ENDPICK);
 <form method="post" enctype="multipart/form-data" action="/adm/grades" name="gradesupload">
-<h3><font color="#339933">Uploading Class Grades</font></h3>
+<h3><span class="LC_info">Uploading Class Grades</span></h3>
 $result
-<hr>
+<hr />
 <h3>Identify fields</h3>
 Total number of records found in file: $distotal <hr />
 Enter as many fields as you can. The system will inform you and bring you back
 to this page if the data selected is insufficient to run your class.<hr />
 <input type="button" value="Reverse Association" onClick="javascript:this.form.associate.value='Reverse Association';submit(this.form);" />
+<label><input type="checkbox" name="noFirstLine" $checked />$ignore</label>
 <input type="hidden" name="associate"  value="" />
 <input type="hidden" name="phase"      value="three" />
 <input type="hidden" name="datatoken"  value="$datatoken" />
-<input type="hidden" name="fileupload" value="$ENV{'form.fileupload'}" />
-<input type="hidden" name="upfiletype" value="$ENV{'form.upfiletype'}" />
+<input type="hidden" name="fileupload" value="$env{'form.fileupload'}" />
+<input type="hidden" name="upfiletype" value="$env{'form.upfiletype'}" />
 <input type="hidden" name="upfile_associate" 
-                                       value="$ENV{'form.upfile_associate'}" />
+                                       value="$env{'form.upfile_associate'}" />
 <input type="hidden" name="symb"       value="$symb" />
-<input type="hidden" name="url"        value="$url" />
-<input type="hidden" name="saveState"  value="$ENV{'form.saveState'}" />
-<input type="hidden" name="probTitle"  value="$ENV{'form.probTitle'}" />
-<input type="hidden" name="command"    value="csvuploadassign" />
+<input type="hidden" name="saveState"  value="$env{'form.saveState'}" />
+<input type="hidden" name="probTitle"  value="$env{'form.probTitle'}" />
+<input type="hidden" name="command"    value="csvuploadoptions" />
 <hr />
 <script type="text/javascript" language="Javascript">
 $javascript
 </script>
 ENDPICK
-    $request->print(&show_grading_menu_form($symb,$url));
     return '';
 
 }
 
 sub csvupload_fields {
-    my ($url) = @_;
-    my (@parts) = &getpartlist($url);
-    my @fields=(['username','Student Username'],['domain','Student Domain']);
+    my ($symb) = @_;
+    my (@parts) = &getpartlist($symb);
+    my @fields=(['ID','Student ID'],
+		['username','Student Username'],
+		['domain','Student Domain']);
+    my (undef,undef,$url) = &Apache::lonnet::decode_symb($symb);
     foreach my $part (sort(@parts)) {
 	my @datum;
 	my $display=&Apache::lonnet::metadata($url,$part.'.display');
 	my $name=$part;
 	if  (!$display) { $display = $name; }
 	@datum=($name,$display);
+	if ($name=~/^stores_(.*)_awarded/) {
+	    push(@fields,['stores_'.$1.'_points',"Points [Part: $1]"]);
+	}
 	push(@fields,\@datum);
     }
     return (@fields);
@@ -2541,10 +3584,7 @@ sub csvuploadmap_footer {
 ENDPICK
 }
 
-sub upcsvScores_form {
-    my ($request) = shift;
-    my ($symb,$url)=&get_symb_and_url($request);
-    if (!$symb) {return '';}
+sub checkforfile_js {
     my $result =<<CSVFORMJS;
 <script type="text/javascript" language="javascript">
     function checkUpload(formname) {
@@ -2556,53 +3596,66 @@ sub upcsvScores_form {
     }
     </script>
 CSVFORMJS
-    $ENV{'form.probTitle'} = &Apache::lonnet::gettitle($symb);
-    my ($table) = &showResourceInfo($url,$ENV{'form.probTitle'});
+    return $result;
+}
+
+sub upcsvScores_form {
+    my ($request) = shift;
+    my ($symb)=&get_symb($request);
+    if (!$symb) {return '';}
+    my $result=&checkforfile_js();
+    $env{'form.probTitle'} = &Apache::lonnet::gettitle($symb);
+    my ($table) = &showResourceInfo($symb,$env{'form.probTitle'});
     $result.=$table;
-    $result.='<br /><table width=100% border=0><tr><td bgcolor="#777777">'."\n";
-    $result.='<table width=100% border=0><tr bgcolor="#e6ffff"><td>'."\n";
-    $result.='&nbsp;<b>Specify a file containing the class scores for current resource'.
+    $result.='<br /><table width="100%" border="0"><tr><td bgcolor="#777777">'."\n";
+    $result.='<table width="100%" border="0"><tr bgcolor="#e6ffff"><td>'."\n";
+    $result.='&nbsp;<b>'.&mt('Specify a file containing the class scores for current resource').
 	'.</b></td></tr>'."\n";
     $result.='<tr bgcolor=#ffffe6><td>'."\n";
+    my $upload=&mt("Upload Scores");
     my $upfile_select=&Apache::loncommon::upfile_select_html();
+    my $ignore=&mt('Ignore First Line');
+    $symb = &Apache::lonenc::check_encrypt($symb);
     $result.=<<ENDUPFORM;
 <form method="post" enctype="multipart/form-data" action="/adm/grades" name="gradesupload">
 <input type="hidden" name="symb" value="$symb" />
-<input type="hidden" name="url" value="$url" />
 <input type="hidden" name="command" value="csvuploadmap" />
-<input type="hidden" name="probTitle" value="$ENV{'form.probTitle'}" />
-<input type="hidden" name="saveState"  value="$ENV{'form.saveState'}" />
+<input type="hidden" name="probTitle" value="$env{'form.probTitle'}" />
+<input type="hidden" name="saveState"  value="$env{'form.saveState'}" />
 $upfile_select
-<br /><input type="button" onClick="javascript:checkUpload(this.form);" value="Upload Scores" />
-
+<br /><input type="button" onClick="javascript:checkUpload(this.form);" value="$upload" />
+<label><input type="checkbox" name="noFirstLine" />$ignore</label>
 </form>
 ENDUPFORM
-    $result.='</td></tr></table>'."\n";
+    $result.=&Apache::loncommon::help_open_topic("Course_Convert_To_CSV",
+                           &mt("How do I create a CSV file from a spreadsheet"))
+    .'</td></tr></table>'."\n";
     $result.='</td></tr></table><br /><br />'."\n";
-    $result.=&show_grading_menu_form($symb,$url);
+    $result.=&show_grading_menu_form($symb);
     return $result;
 }
 
 
 sub csvuploadmap {
     my ($request)= @_;
-    my ($symb,$url)=&get_symb_and_url($request);
+    my ($symb)=&get_symb($request);
     if (!$symb) {return '';}
 
     my $datatoken;
-    if (!$ENV{'form.datatoken'}) {
+    if (!$env{'form.datatoken'}) {
 	$datatoken=&Apache::loncommon::upfile_store($request);
     } else {
-	$datatoken=$ENV{'form.datatoken'};
+	$datatoken=$env{'form.datatoken'};
 	&Apache::loncommon::load_tmp_file($request);
     }
     my @records=&Apache::loncommon::upfile_record_sep();
-    &csvuploadmap_header($request,$symb,$url,$datatoken,$#records+1);
+    if ($env{'form.noFirstLine'}) { shift(@records); }
+    &csvuploadmap_header($request,$symb,$datatoken,$#records+1);
     my ($i,$keyfields);
     if (@records) {
-	my @fields=&csvupload_fields($url);
+	my @fields=&csvupload_fields($symb);
 
-	if ($ENV{'form.upfile_associate'} eq 'reverse') {	
+	if ($env{'form.upfile_associate'} eq 'reverse') {	
 	    &Apache::loncommon::csv_print_samples($request,\@records);
 	    $i=&Apache::loncommon::csv_print_select_table($request,\@records,
 							  \@fields);
@@ -2612,47 +3665,122 @@ sub csvuploadmap {
 	    unshift(@fields,['none','']);
 	    $i=&Apache::loncommon::csv_samples_select_table($request,\@records,
 							    \@fields);
-	    my %sone=&Apache::loncommon::record_sep($records[0]);
-	    $keyfields=join(',',sort(keys(%sone)));
+            foreach my $rec (@records) {
+                my %temp = &Apache::loncommon::record_sep($rec);
+                if (%temp) {
+                    $keyfields=join(',',sort(keys(%temp)));
+                    last;
+                }
+            }
 	}
     }
     &csvuploadmap_footer($request,$i,$keyfields);
-    $request->print(&show_grading_menu_form($symb,$url));
+    $request->print(&show_grading_menu_form($symb));
 
     return '';
 }
 
-sub csvuploadassign {
+sub csvuploadoptions {
     my ($request)= @_;
-    my ($symb,$url)=&get_symb_and_url($request);
-    if (!$symb) {return '';}
-    &Apache::loncommon::load_tmp_file($request);
-    my @gradedata = &Apache::loncommon::upfile_record_sep();
-    my @keyfields = split(/\,/,$ENV{'form.keyfields'});
-    my %fields=();
-    for (my $i=0; $i<=$ENV{'form.nfields'}; $i++) {
-	if ($ENV{'form.upfile_associate'} eq 'reverse') {
-	    if ($ENV{'form.f'.$i} ne 'none') {
-		$fields{$keyfields[$i]}=$ENV{'form.f'.$i};
+    my ($symb)=&get_symb($request);
+    my $checked=(($env{'form.noFirstLine'})?'1':'0');
+    my $ignore=&mt('Ignore First Line');
+    $request->print(<<ENDPICK);
+<form method="post" enctype="multipart/form-data" action="/adm/grades" name="gradesupload">
+<h3><span class="LC_info">Uploading Class Grade Options</span></h3>
+<input type="hidden" name="command"    value="csvuploadassign" />
+<!--
+<p>
+<label>
+   <input type="checkbox" name="show_full_results" />
+   Show a table of all changes
+</label>
+</p>
+-->
+<p>
+<label>
+   <input type="checkbox" name="overwite_scores" checked="checked" />
+   Overwrite any existing score
+</label>
+</p>
+ENDPICK
+    my %fields=&get_fields();
+    if (!defined($fields{'domain'})) {
+	my $domform = &Apache::loncommon::select_dom_form($env{'request.role.domain'},'default_domain');
+	$request->print("\n<p> Users are in domain: ".$domform."</p>\n");
+    }
+    foreach my $key (sort(keys(%env))) {
+	if ($key !~ /^form\.(.*)$/) { next; }
+	my $cleankey=$1;
+	if ($cleankey eq 'command') { next; }
+	$request->print('<input type="hidden" name="'.$cleankey.
+			'"  value="'.$env{$key}.'" />'."\n");
+    }
+    # FIXME do a check for any duplicated user ids...
+    # FIXME do a check for any invalid user ids?...
+    $request->print('<input type="submit" value="Assign Grades" /><br />
+<hr /></form>'."\n");
+    $request->print(&show_grading_menu_form($symb));
+    return '';
+}
+
+sub get_fields {
+    my %fields;
+    my @keyfields = split(/\,/,$env{'form.keyfields'});
+    for (my $i=0; $i<=$env{'form.nfields'}; $i++) {
+	if ($env{'form.upfile_associate'} eq 'reverse') {
+	    if ($env{'form.f'.$i} ne 'none') {
+		$fields{$keyfields[$i]}=$env{'form.f'.$i};
 	    }
 	} else {
-	    if ($ENV{'form.f'.$i} ne 'none') {
-		$fields{$ENV{'form.f'.$i}}=$keyfields[$i];
+	    if ($env{'form.f'.$i} ne 'none') {
+		$fields{$env{'form.f'.$i}}=$keyfields[$i];
 	    }
 	}
     }
+    return %fields;
+}
+
+sub csvuploadassign {
+    my ($request)= @_;
+    my ($symb)=&get_symb($request);
+    if (!$symb) {return '';}
+    my $error_msg = '';
+    &Apache::loncommon::load_tmp_file($request);
+    my @gradedata = &Apache::loncommon::upfile_record_sep();
+    if ($env{'form.noFirstLine'}) { shift(@gradedata); }
+    my %fields=&get_fields();
     $request->print('<h3>Assigning Grades</h3>');
-    my $courseid=$ENV{'request.course.id'};
+    my $courseid=$env{'request.course.id'};
     my ($classlist) = &getclasslist('all',0);
     my @notallowed;
     my @skipped;
     my $countdone=0;
     foreach my $grade (@gradedata) {
 	my %entries=&Apache::loncommon::record_sep($grade);
+	my $domain;
+	if ($entries{$fields{'domain'}}) {
+	    $domain=$entries{$fields{'domain'}};
+	} else {
+	    $domain=$env{'form.default_domain'};
+	}
+	$domain=~s/\s//g;
 	my $username=$entries{$fields{'username'}};
-	my $domain=$entries{$fields{'domain'}};
+	$username=~s/\s//g;
+	if (!$username) {
+	    my $id=$entries{$fields{'ID'}};
+	    $id=~s/\s//g;
+	    my %ids=&Apache::lonnet::idget($domain,$id);
+	    $username=$ids{$id};
+	}
 	if (!exists($$classlist{"$username:$domain"})) {
-	    push(@skipped,"$username:$domain");
+	    my $id=$entries{$fields{'ID'}};
+	    $id=~s/\s//g;
+	    if ($id) {
+		push(@skipped,"$id:$domain");
+	    } else {
+		push(@skipped,"$username:$domain");
+	    }
 	    next;
 	}
 	my $usec=$classlist->{"$username:$domain"}[5];
@@ -2660,34 +3788,70 @@ sub csvuploadassign {
 	    push(@notallowed,"$username:$domain");
 	    next;
 	}
+	my %points;
 	my %grades;
 	foreach my $dest (keys(%fields)) {
-	    if ($dest eq 'username' || $dest eq 'domain') { next; }
-	    if ($entries{$fields{$dest}} eq '') { next; }
-	    my $store_key=$dest;
-	    $store_key=~s/^stores/resource/;
-	    $store_key=~s/_/\./g;
-	    $grades{$store_key}=$entries{$fields{$dest}};
-	}
-	$grades{"resource.regrader"}="$ENV{'user.name'}:$ENV{'user.domain'}";
-	&Apache::lonnet::cstore(\%grades,$symb,$ENV{'request.course.id'},
-				$domain,$username);
-	$request->print('.');
+	    if ($dest eq 'ID' || $dest eq 'username' ||
+		$dest eq 'domain') { next; }
+	    if ($entries{$fields{$dest}} =~ /^\s*$/) { next; }
+	    if ($dest=~/stores_(.*)_points/) {
+		my $part=$1;
+		my $wgt =&Apache::lonnet::EXT('resource.'.$part.'.weight',
+					      $symb,$domain,$username);
+                if ($wgt) {
+                    $entries{$fields{$dest}}=~s/\s//g;
+                    my $pcr=$entries{$fields{$dest}} / $wgt;
+                    my $award='correct_by_override';
+                    $grades{"resource.$part.awarded"}=$pcr;
+                    $grades{"resource.$part.solved"}=$award;
+                    $points{$part}=1;
+                } else {
+                    $error_msg = "<br />" .
+                        &mt("Some point values were assigned"
+                            ." for problems with a weight "
+                            ."of zero. These values were "
+                            ."ignored.");
+                }
+	    } else {
+		if ($dest=~/stores_(.*)_awarded/) { if ($points{$1}) {next;} }
+		if ($dest=~/stores_(.*)_solved/)  { if ($points{$1}) {next;} }
+		my $store_key=$dest;
+		$store_key=~s/^stores/resource/;
+		$store_key=~s/_/\./g;
+		$grades{$store_key}=$entries{$fields{$dest}};
+	    }
+	}
+	if (! %grades) { push(@skipped,"$username:$domain no data to save"); }
+	$grades{"resource.regrader"}="$env{'user.name'}:$env{'user.domain'}";
+#	&Apache::lonnet::logthis(" storing ".(join('-',%grades)));
+	my $result=&Apache::lonnet::cstore(\%grades,$symb,
+					   $env{'request.course.id'},
+					   $domain,$username);
+	if ($result eq 'ok') {
+	    $request->print('.');
+	} else {
+	    $request->print("<p>
+                              <span class=\"LC_error\">
+                                 Failed to save student $username:$domain.
+                                 Message when trying to save was ($result)
+                              </span>
+                             </p>" );
+	}
 	$request->rflush();
 	$countdone++;
     }
-    $request->print("<br />Stored $countdone students\n");
+    $request->print("<br />Saved $countdone students\n");
     if (@skipped) {
-	$request->print('<p<font size="+1"><b>Skipped Students</b></font></p>');
+	$request->print('<p><h4><b>Skipped Students</b></h4></p>');
 	foreach my $student (@skipped) { $request->print("$student<br />\n"); }
     }
     if (@notallowed) {
-	$request->print('<p><font size="+1" color="red"><b>Students Not Allowed to Modify</b></font></p>');
+	$request->print('<p><span class="LC_error">Students Not Allowed to Modify</span></p>');
 	foreach my $student (@notallowed) { $request->print("$student<br />\n"); }
     }
     $request->print("<br />\n");
-    $request->print(&show_grading_menu_form($symb,$url));
-    return '';
+    $request->print(&show_grading_menu_form($symb));
+    return $error_msg;
 }
 #------------- end of section for handling csv file upload ---------
 #
@@ -2716,27 +3880,29 @@ function checkPickOne(formname) {
 </script>
 LISTJAVASCRIPT
     &commonJSfunctions($request);
-    my ($symb,$url) = &get_symb_and_url($request);
-    my $cdom      = $ENV{"course.$ENV{'request.course.id'}.domain"};
-    my $cnum      = $ENV{"course.$ENV{'request.course.id'}.num"};
-    my $getsec    = $ENV{'form.section'} eq '' ? 'all' : $ENV{'form.section'};
+    my ($symb) = &get_symb($request);
+    my $cdom      = $env{"course.$env{'request.course.id'}.domain"};
+    my $cnum      = $env{"course.$env{'request.course.id'}.num"};
+    my $getsec    = $env{'form.section'} eq '' ? 'all' : $env{'form.section'};
 
-    my $result='<h3><font color="#339933">&nbsp;'.
-	'Manual Grading by Page or Sequence</font></h3>';
+    my $result='<h3><span class="LC_info">&nbsp;'.
+	'Manual Grading by Page or Sequence</span></h3>';
 
     $result.='<form action="/adm/grades" method="post" name="displayPage">'."\n";
     $result.='&nbsp;<b>Problems from:</b> <select name="selectpage">'."\n";
-    my ($titles,$symbx) = &getSymbMap($request);
-    my ($curpage,$type,$mapId) = ($symb =~ /(.*?\.(page|sequence))___(\d+)___/); 
+    my ($titles,$symbx) = &getSymbMap();
+    my ($curpage) =&Apache::lonnet::decode_symb($symb); 
+#    my ($curpage,$mapId) =&Apache::lonnet::decode_symb($symb); 
+#    my $type=($curpage =~ /\.(page|sequence)/);
     my $ctr=0;
     foreach (@$titles) {
 	my ($minder,$showtitle) = ($_ =~ /(\d+)\.(.*)/);
 	$result.='<option value="'.$ctr.'" '.
-	    ($$symbx{$_} =~ /$curpage$/ ? 'selected="on"' : '').
+	    ($$symbx{$_} =~ /$curpage$/ ? 'selected="selected"' : '').
 	    '>'.$showtitle.'</option>'."\n";
 	$ctr++;
     }
-    $result.= '</select>'."<br>\n";
+    $result.= '</select>'."<br />\n";
     $ctr=0;
     foreach (@$titles) {
 	my ($minder,$showtitle) = ($_ =~ /(\d+)\.(.*)/);
@@ -2747,27 +3913,30 @@ LISTJAVASCRIPT
     $result.='<input type="hidden" name="page" />'."\n".
 	'<input type="hidden" name="title" />'."\n";
 
-    $result.='&nbsp;<b>View Problems Text: </b><input type="radio" name="vProb" value="no" checked /> no '."\n".
-	'<input type="radio" name="vProb" value="yes" /> yes '."<br>\n";
+    $result.='&nbsp;<b>View Problems Text: </b><label><input type="radio" name="vProb" value="no" checked="checked" /> no </label>'."\n".
+	'<label><input type="radio" name="vProb" value="yes" /> yes </label>'."<br />\n";
 
     $result.='&nbsp;<b>Submission Details: </b>'.
-	'<input type="radio" name="lastSub" value="none" /> none'."\n".
-	'<input type="radio" name="lastSub" value="datesub" checked /> by dates and submissions'."\n".
-	'<input type="radio" name="lastSub" value="all" /> all details'."\n";
-
-    $result.='<input type="hidden" name="section"     value="'.$getsec.'" />'."\n".
-	'<input type="hidden" name="Status"  value="'.$ENV{'form.Status'}.'" />'."\n".
+	'<label><input type="radio" name="lastSub" value="none" /> none</label>'."\n".
+	'<label><input type="radio" name="lastSub" value="datesub" checked="checked" /> by dates and submissions</label>'."\n".
+	'<label><input type="radio" name="lastSub" value="all" /> all details</label>'."\n";
+    
+    $result.=&build_section_inputs();
+    my $stu_status = join(':',&Apache::loncommon::get_env_multiple('form.Status'));
+    $result.='<input type="hidden" name="Status"  value="'.$stu_status.'" />'."\n".
 	'<input type="hidden" name="command" value="displayPage" />'."\n".
-	'<input type="hidden" name="url"     value="'.$url.'" />'."\n".
-	'<input type="hidden" name="symb"    value="'.$symb.'" />'."\n".
-	'<input type="hidden" name="saveState" value="'.$ENV{'form.saveState'}.'" />'."<br />\n";
+	'<input type="hidden" name="symb"    value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+	'<input type="hidden" name="saveState" value="'.$env{'form.saveState'}.'" />'."<br />\n";
+
+    $result.='&nbsp;<b>'.&mt('Use CODE:').' </b>'.
+	'<input type="text" name="CODE" value="" /><br />'."\n";
 
     $result.='&nbsp;<input type="button" '.
 	'onClick="javascript:checkPickOne(this.form);"value="Next->" /><br />'."\n";
 
     $request->print($result);
 
-    my $studentTable.='&nbsp;<b>Select a student you wish to grade and then click on the Next button.</b><br>'.
+    my $studentTable.='&nbsp;<b>Select a student you wish to grade and then click on the Next button.</b><br />'.
 	'<table border="0"><tr><td bgcolor="#777777">'.
 	'<table border="0"><tr bgcolor="#e6ffff">'.
 	'<td align="right">&nbsp;<b>No.</b></td>'.
@@ -2777,48 +3946,51 @@ LISTJAVASCRIPT
  
     my (undef,undef,$fullname) = &getclasslist($getsec,'1');
     my $ptr = 1;
-    foreach my $student (sort {lc($$fullname{$a}) cmp lc($$fullname{$b}) } keys %$fullname) {
+    foreach my $student (sort 
+			 {
+			     if (lc($$fullname{$a}) ne lc($$fullname{$b})) {
+				 return (lc($$fullname{$a}) cmp lc($$fullname{$b}));
+			     }
+			     return $a cmp $b;
+			 } (keys(%$fullname))) {
 	my ($uname,$udom) = split(/:/,$student);
 	$studentTable.=($ptr%2 == 1 ? '<tr bgcolor="#ffffe6">' : '</td>');
 	$studentTable.='<td align="right">'.$ptr.'&nbsp;</td>';
-	$studentTable.='<td>&nbsp;<input type="radio" name="student" value="'.$student.'" /> '
-	    .&nameUserString(undef,$$fullname{$student},$uname,$udom)."\n";
+	$studentTable.='<td>&nbsp;<label><input type="radio" name="student" value="'.$student.'" /> '
+	    .&nameUserString(undef,$$fullname{$student},$uname,$udom)."</label>\n";
 	$studentTable.=($ptr%2 == 0 ? '</td></tr>' : '');
 	$ptr++;
     }
-    $studentTable.='</td><td>&nbsp;</td><td>&nbsp;' if ($ptr%2 == 0);
-    $studentTable.='</td></tr></table></td></tr></table>'."\n";
+    $studentTable.='</td><td>&nbsp;</td><td>&nbsp;</td></tr>' if ($ptr%2 == 0);
+    $studentTable.='</table></td></tr></table>'."\n";
     $studentTable.='<input type="button" '.
 	'onClick="javascript:checkPickOne(this.form);"value="Next->" /></form>'."\n";
 
-    $studentTable.=&show_grading_menu_form($symb,$url);
+    $studentTable.=&show_grading_menu_form($symb);
     $request->print($studentTable);
 
     return '';
 }
 
 sub getSymbMap {
-    my ($request) = @_;
-    my $navmap = Apache::lonnavmaps::navmap-> new($ENV{'request.course.fn'}.'.db',
-						  $ENV{'request.course.fn'}.'_parms.db');
-    $navmap->init();
+    my $navmap = Apache::lonnavmaps::navmap->new();
 
     my %symbx = ();
     my @titles = ();
     my $minder = 0;
 
     # Gather every sequence that has problems.
-    my @sequences = $navmap->retrieveResources(undef, sub { shift->is_map(); }, 1);
+    my @sequences = $navmap->retrieveResources(undef, sub { shift->is_map(); },
+					       1,0,1);
     for my $sequence ($navmap->getById('0.0'), @sequences) {
 	if ($navmap->hasResource($sequence, sub { shift->is_problem(); }, 0) ) {
-	    my $title = $minder.'.'.$sequence->compTitle();
-	    push @titles, $title; # minder in case two titles are identical
-	    $symbx{$title} = $sequence->symb();
+	    my $title = $minder.'.'.
+		&HTML::Entities::encode($sequence->compTitle(),'"\'&');
+	    push(@titles, $title); # minder in case two titles are identical
+	    $symbx{$title} = &HTML::Entities::encode($sequence->symb(),'"\'&');
 	    $minder++;
 	}
     }
-
-    $navmap->untieHashes();
     return \@titles,\%symbx;
 }
 
@@ -2827,45 +3999,65 @@ sub getSymbMap {
 sub displayPage {
     my ($request) = shift;
 
-    my ($symb,$url) = &get_symb_and_url($request);
-    my $cdom      = $ENV{"course.$ENV{'request.course.id'}.domain"};
-    my $cnum      = $ENV{"course.$ENV{'request.course.id'}.num"};
-    my $getsec    = $ENV{'form.section'} eq '' ? 'all' : $ENV{'form.section'};
-    my $pageTitle = $ENV{'form.page'};
+    my ($symb) = &get_symb($request);
+    my $cdom      = $env{"course.$env{'request.course.id'}.domain"};
+    my $cnum      = $env{"course.$env{'request.course.id'}.num"};
+    my $getsec    = $env{'form.section'} eq '' ? 'all' : $env{'form.section'};
+    my $pageTitle = $env{'form.page'};
     my ($classlist,undef,$fullname) = &getclasslist($getsec,'1');
-    my ($uname,$udom) = split(/:/,$ENV{'form.student'});
-    my $usec=$classlist->{$ENV{'form.student'}}[5];
+    my ($uname,$udom) = split(/:/,$env{'form.student'});
+    my $usec=$classlist->{$env{'form.student'}}[5];
+
+    #need to make sure we have the correct data for later EXT calls, 
+    #thus invalidate the cache
+    &Apache::lonnet::devalidatecourseresdata(
+                 $env{'course.'.$env{'request.course.id'}.'.num'},
+                 $env{'course.'.$env{'request.course.id'}.'.domain'});
+    &Apache::lonnet::clear_EXT_cache_status();
+
     if (!&canview($usec)) {
-	$request->print('<font color="red">Unable to view requested student.('.$ENV{'form.student'}.')</font>');
-	$request->print(&show_grading_menu_form($symb,$url));
+	$request->print('<span class="LC_warning">Unable to view requested student.('.$env{'form.student'}.')</span>');
+	$request->print(&show_grading_menu_form($symb));
 	return;
     }
-    my $result='<h3><font color="#339933">&nbsp;'.$ENV{'form.title'}.'</font></h3>';
-    $result.='<h3>&nbsp;Student: '.&nameUserString(undef,$$fullname{$ENV{'form.student'}},$uname,$udom).
+    my $result='<h3><span class="LC_info">&nbsp;'.$env{'form.title'}.'</span></h3>';
+    $result.='<h3>&nbsp;Student: '.&nameUserString(undef,$$fullname{$env{'form.student'}},$uname,$udom).
 	'</h3>'."\n";
+    if (&Apache::lonnet::validCODE($env{'form.CODE'})) {
+	$result.='<h3>&nbsp;CODE: '.$env{'form.CODE'}.'</h3>'."\n";
+    } else {
+	delete($env{'form.CODE'});
+    }
     &sub_page_js($request);
     $request->print($result);
 
-    my $navmap = Apache::lonnavmaps::navmap-> new($ENV{'request.course.fn'}.'.db',
-						  $ENV{'request.course.fn'}.'_parms.db',1, 1);
-    my ($mapUrl, $id, $resUrl) = split(/___/, $ENV{'form.page'});
+    my $navmap = Apache::lonnavmaps::navmap->new();
+    my ($mapUrl, $id, $resUrl)=&Apache::lonnet::decode_symb($env{'form.page'});
     my $map = $navmap->getResourceByUrl($resUrl); # add to navmaps
-
+    if (!$map) {
+	$request->print('<span class="LC_warning">Unable to view requested sequence. ('.$resUrl.')</span>');
+	$request->print(&show_grading_menu_form($symb));
+	return; 
+    }
     my $iterator = $navmap->getIterator($map->map_start(),
 					$map->map_finish());
 
     my $studentTable='<form action="/adm/grades" method="post" name="gradePage">'."\n".
 	'<input type="hidden" name="command" value="gradeByPage" />'."\n".
-	'<input type="hidden" name="fullname" value="'.$$fullname{$ENV{'form.student'}}.'" />'."\n".
-	'<input type="hidden" name="student" value="'.$ENV{'form.student'}.'" />'."\n".
+	'<input type="hidden" name="fullname" value="'.$$fullname{$env{'form.student'}}.'" />'."\n".
+	'<input type="hidden" name="student" value="'.$env{'form.student'}.'" />'."\n".
 	'<input type="hidden" name="page"    value="'.$pageTitle.'" />'."\n".
-	'<input type="hidden" name="title"   value="'.$ENV{'form.title'}.'" />'."\n".
-	'<input type="hidden" name="url"     value="'.$url.'" />'."\n".
-	'<input type="hidden" name="symb"    value="'.$symb.'" />'."\n".
+	'<input type="hidden" name="title"   value="'.$env{'form.title'}.'" />'."\n".
+	'<input type="hidden" name="symb"    value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
 	'<input type="hidden" name="overRideScore" value="no" />'."\n".
-	'<input type="hidden" name="saveState" value="'.$ENV{'form.saveState'}.'" />'."\n";
+	'<input type="hidden" name="saveState" value="'.$env{'form.saveState'}.'" />'."\n";
 
-    my $checkIcon = '<img src="'.$request->dir_config('lonIconsURL').
+    if (defined($env{'form.CODE'})) {
+	$studentTable.=
+	    '<input type="hidden" name="CODE" value="'.$env{'form.CODE'}.'" />'."\n";
+    }
+    my $checkIcon = '<img alt="'.&mt('Check Mark').
+	'" src="'.$request->dir_config('lonIconsURL').
 	'/check.gif" height="16" border="0" />';
 
     $studentTable.='&nbsp;<b>Note:</b> Problems graded correct by the computer are marked with a '.$checkIcon.
@@ -2873,9 +4065,10 @@ sub displayPage {
 	'<table border="0"><tr><td bgcolor="#777777">'.
 	'<table border="0"><tr bgcolor="#e6ffff">'.
 	'<td align="center"><b>&nbsp;Prob.&nbsp;</b></td>'.
-	'<td><b>&nbsp;'.($ENV{'form.vProb'} eq 'no' ? 'Title' : 'Problem Text').'/Grade</b></td></tr>';
+	'<td><b>&nbsp;'.($env{'form.vProb'} eq 'no' ? 'Title' : 'Problem Text').'/Grade</b></td></tr>';
 
-    my ($depth,$question) = (1,1);
+    &Apache::lonxml::clear_problem_counter();
+    my ($depth,$question,$prob) = (1,1,1);
     $iterator->next(); # skip the first BEGIN_MAP
     my $curRes = $iterator->next(); # for "current resource"
     while ($depth > 0) {
@@ -2886,39 +4079,48 @@ sub displayPage {
 	    my $parts = $curRes->parts();
             my $title = $curRes->compTitle();
 	    my $symbx = $curRes->symb();
-	    $studentTable.='<tr bgcolor="#ffffe6"><td align="center" valign="top" >'.$question.
-		(scalar(@{$parts}) == 1 ? '' : '<br>('.scalar(@{$parts}).'&nbsp;parts)').'</td>';
+	    $studentTable.='<tr bgcolor="#ffffe6"><td align="center" valign="top" >'.$prob.
+		(scalar(@{$parts}) == 1 ? '' : '<br />('.scalar(@{$parts}).'&nbsp;parts)').'</td>';
 	    $studentTable.='<td valign="top">';
-	    if ($ENV{'form.vProb'} eq 'yes') {
-		$studentTable.=&show_problem($request,$symbx,$uname,$udom,1);
+	    my %form = ('CODE' => $env{'form.CODE'},);
+	    if ($env{'form.vProb'} eq 'yes' ) {
+		$studentTable.=&show_problem($request,$symbx,$uname,$udom,1,
+					     undef,'both',\%form);
 	    } else {
-		my $companswer = &Apache::loncommon::get_student_answers($symbx,$uname,$udom,$ENV{'request.course.id'});
+		my $companswer = &Apache::loncommon::get_student_answers($symbx,$uname,$udom,$env{'request.course.id'},%form);
 		$companswer =~ s|<form(.*?)>||g;
 		$companswer =~ s|</form>||g;
 #		while ($companswer =~ /(<a href\=\"javascript:newWindow.*?Script Vars<\/a>)/s) { #<a href="javascript:newWindow</a>
 #		    $companswer =~ s/$1/ /ms;
-#		    $request->print('match='.$1."<br>\n");
+#		    $request->print('match='.$1."<br />\n");
 #		}
 #		$companswer =~ s|<table border=\"1\">|<table border=\"0\">|g;
-		$studentTable.='&nbsp;<b>'.$title.'</b>&nbsp;<br>&nbsp;<b>Correct answer:</b><br>'.$companswer;
+		$studentTable.='&nbsp;<b>'.$title.'</b>&nbsp;<br />&nbsp;<b>Correct answer:</b><br />'.$companswer;
 	    }
 
-	    my %record = &Apache::lonnet::restore($symbx,$ENV{'request.course.id'},$udom,$uname);
+	    my %record = &Apache::lonnet::restore($symbx,$env{'request.course.id'},$udom,$uname);
 
-	    if ($ENV{'form.lastSub'} eq 'datesub') {
+	    if ($env{'form.lastSub'} eq 'datesub') {
 		if ($record{'version'} eq '') {
-		    $studentTable.='<br />&nbsp;<font color="red">No recorded submission for this problem</font><br />';
+		    $studentTable.='<br />&nbsp;<span class="LC_warning">No recorded submission for this problem</span><br />';
 		} else {
 		    my %responseType = ();
 		    foreach my $partid (@{$parts}) {
-			$responseType{$partid} = $curRes->responseType($partid);
+			my @responseIds =$curRes->responseIds($partid);
+			my @responseType =$curRes->responseType($partid);
+			my %responseIds;
+			for (my $i=0;$i<=$#responseIds;$i++) {
+			    $responseIds{$responseIds[$i]}=$responseType[$i];
+			}
+			$responseType{$partid} = \%responseIds;
 		    }
-		    $studentTable.= &displaySubByDates(\$symbx,\%record,$parts,\%responseType,$checkIcon);
+		    $studentTable.= &displaySubByDates($symbx,\%record,$parts,\%responseType,$checkIcon,$uname,$udom);
+
 		}
-	    } elsif ($ENV{'form.lastSub'} eq 'all') {
-		my $last = ($ENV{'form.lastSub'} eq 'last' ? 'last' : '');
+	    } elsif ($env{'form.lastSub'} eq 'all') {
+		my $last = ($env{'form.lastSub'} eq 'last' ? 'last' : '');
 		$studentTable.=&Apache::loncommon::get_previous_attempt($symbx,$uname,$udom,
-									$ENV{'request.course.id'},
+									$env{'request.course.id'},
 									'','.submission');
  
 	    }
@@ -2928,6 +4130,7 @@ sub displayPage {
 		    $studentTable.='<input type="hidden" name="q_'.$question.'" value="'.$partid.'" />'."\n";
 		    $question++;
 		}
+		$prob++;
 	    }
 	    $studentTable.='</td></tr>';
 
@@ -2935,54 +4138,116 @@ sub displayPage {
         $curRes = $iterator->next();
     }
 
-    $navmap->untieHashes();
-
-    $studentTable.='</td></tr></table></td></tr></table>'."\n".
+    $studentTable.='</table></td></tr></table>'."\n".
 	'<input type="button" value="Save" '.
-	'onClick="javascript:checkSubmitPage(this.form,'.$question.');" TARGET=_self />'.
+	'onClick="javascript:checkSubmitPage(this.form,'.$question.');" />'.
 	'</form>'."\n";
-    $studentTable.=&show_grading_menu_form($symb,$url);
+    $studentTable.=&show_grading_menu_form($symb);
     $request->print($studentTable);
 
     return '';
 }
 
 sub displaySubByDates {
-    my ($symbx,$record,$parts,$responseType,$checkIcon) = @_;
+    my ($symb,$record,$parts,$responseType,$checkIcon,$uname,$udom) = @_;
+    my $isCODE=0;
+    my $isTask = ($symb =~/\.task$/);
+    if (exists($record->{'resource.CODE'})) { $isCODE=1; }
     my $studentTable='<table border="0" width="100%"><tr><td bgcolor="#777777">'.
 	'<table border="0" width="100%"><tr bgcolor="#e6ffff">'.
 	'<td><b>Date/Time</b></td>'.
+	($isCODE?'<td><b>CODE</b></td>':'').
 	'<td><b>Submission</b></td>'.
 	'<td><b>Status&nbsp;</b></td></tr>';
     my ($version);
     my %mark;
+    my %orders;
     $mark{'correct_by_student'} = $checkIcon;
-    return '<br />&nbsp;<font color="red">Nothing submitted - no attempts</font><br />' 
-	if (!exists($$record{'1:timestamp'}));
+    if (!exists($$record{'1:timestamp'})) {
+	return '<br />&nbsp;<span class="LC_warning">Nothing submitted - no attempts</span><br />';
+    }
+
+    my $interaction;
     for ($version=1;$version<=$$record{'version'};$version++) {
 	my $timestamp = scalar(localtime($$record{$version.':timestamp'}));
+	if (exists($$record{$version.':resource.0.version'})) {
+	    $interaction = $$record{$version.':resource.0.version'};
+	}
+
+	my $where = ($isTask ? "$version:resource.$interaction"
+		             : "$version:resource");
+	#&Apache::lonnet::logthis(" got $where");
 	$studentTable.='<tr bgcolor="#ffffff" valign="top"><td>'.$timestamp.'</td>';
+	if ($isCODE) {
+	    $studentTable.='<td>'.$record->{$version.':resource.CODE'}.'</td>';
+	}
 	my @versionKeys = split(/\:/,$$record{$version.':keys'});
 	my @displaySub = ();
 	foreach my $partid (@{$parts}) {
-	    my @matchKey = grep /^resource\.$partid\..*?\.submission$/,@versionKeys;
+	    my @matchKey = ($isTask ? sort(grep /^resource\.\d+\.\Q$partid\E\.award$/,@versionKeys)
+			            : sort(grep /^resource\.\Q$partid\E\..*?\.submission$/,@versionKeys));
+	    
+
 #	    next if ($$record{"$version:resource.$partid.solved"} eq '');
-	    $displaySub[0].=(exists $$record{$version.':'.$matchKey[0]}) ? 
-		'<b>Part&nbsp;'.$partid.'&nbsp;'.
-		($$record{"$version:resource.$partid.tries"} eq '' ? 'Trial&nbsp;not&nbsp;counted' :
-		 'Trial&nbsp;'.$$record{"$version:resource.$partid.tries"}).'</b>&nbsp; '.
-		 &cleanRecord($$record{$version.':'.$matchKey[0]},$$responseType{$partid},$$symbx).'<br />' : '';
-	    $displaySub[1].=(exists $$record{"$version:resource.$partid.award"}) ?
-		'<b>Part&nbsp;'.$partid.'</b> &nbsp;'.
-		lc($$record{"$version:resource.$partid.award"}).' '.
-		$mark{$$record{"$version:resource.$partid.solved"}}.'<br />' : '';
-	    $displaySub[2].=(exists $$record{"$version:resource.$partid.regrader"}) ?
-		$$record{"$version:resource.$partid.regrader"}.' (<b>Part:</b> '.$partid.')' : '';
-	}
-	$displaySub[2].=(exists $$record{"$version:resource.regrader"}) ?
-	    $$record{"$version:resource.regrader"} : ''; # needed because old essay regrader has not parts info
-	$studentTable.='<td>'.$displaySub[0].'&nbsp;</td><td>'.$displaySub[1].
-	    ($displaySub[2] eq '' ? '' : 'Manually graded by '.$displaySub[2]).'&nbsp;</td></tr>';
+	    my $display_part=&get_display_part($partid,$symb);
+	    foreach my $matchKey (@matchKey) {
+		if (exists($$record{$version.':'.$matchKey}) &&
+		    $$record{$version.':'.$matchKey} ne '') {
+
+		    my ($responseId)= ($isTask ? ($matchKey=~ /^resource\.(.*?)\.\Q$partid\E\.award$/)
+				               : ($matchKey=~ /^resource\.\Q$partid\E\.(.*?)\.submission$/));
+		    #&Apache::lonnet::logthis("match $matchKey $responseId (".$$record{$version.':'.$matchKey});
+		    $displaySub[0].='<b>Part:</b>&nbsp;'.$display_part.'&nbsp;';
+		    $displaySub[0].='<span class="LC_internal_info">(ID&nbsp;'.
+			$responseId.')</span>&nbsp;<b>';
+		    if ($$record{"$where.$partid.tries"} eq '') {
+			$displaySub[0].='Trial&nbsp;not&nbsp;counted';
+		    } else {
+			$displaySub[0].='Trial&nbsp;'.
+			    $$record{"$where.$partid.tries"};
+		    }
+		    my $responseType=($isTask ? 'Task'
+                                              : $responseType->{$partid}->{$responseId});
+		    if (!exists($orders{$partid})) { $orders{$partid}={}; }
+		    if (!exists($orders{$partid}->{$responseId})) {
+			$orders{$partid}->{$responseId}=
+			    &get_order($partid,$responseId,$symb,$uname,$udom);
+		    }
+		    $displaySub[0].='</b>&nbsp; '.
+			&cleanRecord($$record{$version.':'.$matchKey},$responseType,$symb,$partid,$responseId,$record,$orders{$partid}->{$responseId},"$version:",$uname,$udom).'<br />';
+		}
+	    }
+	    if (exists($$record{"$where.$partid.checkedin"})) {
+		$displaySub[1].='Checked in by '.
+		    $$record{"$where.$partid.checkedin"}.' into slot '.
+		    $$record{"$where.$partid.checkedin.slot"}.
+		    '<br />';
+	    }
+	    if (exists $$record{"$where.$partid.award"}) {
+		$displaySub[1].='<b>Part:</b>&nbsp;'.$display_part.' &nbsp;'.
+		    lc($$record{"$where.$partid.award"}).' '.
+		    $mark{$$record{"$where.$partid.solved"}}.
+		    '<br />';
+	    }
+	    if (exists $$record{"$where.$partid.regrader"}) {
+		$displaySub[2].=$$record{"$where.$partid.regrader"}.
+		    ' (<b>'.&mt('Part').':</b> '.$display_part.')';
+	    } elsif ($$record{"$version:resource.$partid.regrader"} =~ /\S/) {
+		$displaySub[2].=
+		    $$record{"$version:resource.$partid.regrader"}.
+		    ' (<b>'.&mt('Part').':</b> '.$display_part.')';
+	    }
+	}
+	# needed because old essay regrader has not parts info
+	if (exists $$record{"$version:resource.regrader"}) {
+	    $displaySub[2].=$$record{"$version:resource.regrader"};
+	}
+	$studentTable.='<td>'.$displaySub[0].'&nbsp;</td><td>'.$displaySub[1];
+	if ($displaySub[2]) {
+	    $studentTable.='Manually graded by '.$displaySub[2];
+	}
+	$studentTable.='&nbsp;</td></tr>';
+    
     }
     $studentTable.='</table></td></tr></table>';
     return $studentTable;
@@ -2991,29 +4256,33 @@ sub displaySubByDates {
 sub updateGradeByPage {
     my ($request) = shift;
 
-    my $cdom      = $ENV{"course.$ENV{'request.course.id'}.domain"};
-    my $cnum      = $ENV{"course.$ENV{'request.course.id'}.num"};
-    my $getsec    = $ENV{'form.section'} eq '' ? 'all' : $ENV{'form.section'};
-    my $pageTitle = $ENV{'form.page'};
+    my $cdom      = $env{"course.$env{'request.course.id'}.domain"};
+    my $cnum      = $env{"course.$env{'request.course.id'}.num"};
+    my $getsec    = $env{'form.section'} eq '' ? 'all' : $env{'form.section'};
+    my $pageTitle = $env{'form.page'};
     my ($classlist,undef,$fullname) = &getclasslist($getsec,'1');
-    my ($uname,$udom) = split(/:/,$ENV{'form.student'});
-    my $usec=$classlist->{$ENV{'form.student'}}[5];
+    my ($uname,$udom) = split(/:/,$env{'form.student'});
+    my $usec=$classlist->{$env{'form.student'}}[5];
     if (!&canmodify($usec)) {
-	$request->print('<font color="red">Unable to modify requested student.('.$ENV{'form.student'}.'</font>');
-	$request->print(&show_grading_menu_form($ENV{'form.symb'},$ENV{'form.url'}));
+	$request->print('<span class="LC_warning">Unable to modify requested student.('.$env{'form.student'}.'</span>');
+	$request->print(&show_grading_menu_form($env{'form.symb'}));
 	return;
     }
-    my $result='<h3><font color="#339933">&nbsp;'.$ENV{'form.title'}.'</font></h3>';
-    $result.='<h3>&nbsp;Student: '.&nameUserString(undef,$ENV{'form.fullname'},$uname,$udom).
+    my $result='<h3><span class="LC_info">&nbsp;'.$env{'form.title'}.'</span></h3>';
+    $result.='<h3>&nbsp;Student: '.&nameUserString(undef,$env{'form.fullname'},$uname,$udom).
 	'</h3>'."\n";
 
     $request->print($result);
 
-    my $navmap = Apache::lonnavmaps::navmap-> new($ENV{'request.course.fn'}.'.db',
-						  $ENV{'request.course.fn'}.'_parms.db',1, 1);
-    my ($mapUrl, $id, $resUrl) = split(/___/, $ENV{'form.page'});
+    my $navmap = Apache::lonnavmaps::navmap->new();
+    my ($mapUrl, $id, $resUrl) = &Apache::lonnet::decode_symb( $env{'form.page'});
     my $map = $navmap->getResourceByUrl($resUrl); # add to navmaps
-
+    if (!$map) {
+	$request->print('<span class="LC_warning">Unable to grade requested sequence. ('.$resUrl.')</span>');
+	my ($symb)=&get_symb($request);
+	$request->print(&show_grading_menu_form($symb));
+	return; 
+    }
     my $iterator = $navmap->getIterator($map->map_start(),
 					$map->map_finish());
 
@@ -3026,27 +4295,29 @@ sub updateGradeByPage {
 
     $iterator->next(); # skip the first BEGIN_MAP
     my $curRes = $iterator->next(); # for "current resource"
-    my ($depth,$question,$changeflag)= (1,1,0);
+    my ($depth,$question,$prob,$changeflag)= (1,1,1,0);
     while ($depth > 0) {
         if($curRes == $iterator->BEGIN_MAP) { $depth++; }
         if($curRes == $iterator->END_MAP) { $depth--; }
 
-        if (ref($curRes) && $curRes->is_problem() && !$curRes->randomout) {
+        if (ref($curRes) && $curRes->is_problem()) {
 	    my $parts = $curRes->parts();
             my $title = $curRes->compTitle();
 	    my $symbx = $curRes->symb();
-	    $studentTable.='<tr bgcolor="#ffffe6"><td align="center" valign="top" >'.$question.
-		(scalar(@{$parts}) == 1 ? '' : '<br>('.scalar(@{$parts}).'&nbsp;parts)').'</td>';
+	    $studentTable.='<tr bgcolor="#ffffe6"><td align="center" valign="top" >'.$prob.
+		(scalar(@{$parts}) == 1 ? '' : '<br />('.scalar(@{$parts}).'&nbsp;parts)').'</td>';
 	    $studentTable.='<td valign="top">&nbsp;<b>'.$title.'</b>&nbsp;</td>';
 
 	    my %newrecord=();
 	    my @displayPts=();
+            my %aggregate = ();
+            my $aggregateflag = 0;
 	    foreach my $partid (@{$parts}) {
-		my $newpts = $ENV{'form.GD_BOX'.$question.'_'.$partid};
-		my $oldpts = $ENV{'form.oldpts'.$question.'_'.$partid};
+		my $newpts = $env{'form.GD_BOX'.$question.'_'.$partid};
+		my $oldpts = $env{'form.oldpts'.$question.'_'.$partid};
 
-		my $wgt = $ENV{'form.WGT'.$question.'_'.$partid} != 0 ? 
-		    $ENV{'form.WGT'.$question.'_'.$partid} : 1;
+		my $wgt = $env{'form.WGT'.$question.'_'.$partid} != 0 ? 
+		    $env{'form.WGT'.$question.'_'.$partid} : 1;
 		my $partial = $newpts/$wgt;
 		my $score;
 		if ($partial > 0) {
@@ -3054,56 +4325,82 @@ sub updateGradeByPage {
 		} elsif ($newpts ne '') { #empty is taken as 0
 		    $score = 'incorrect_by_override';
 		}
-		my $dropMenu = $ENV{'form.GD_SEL'.$question.'_'.$partid};
+		my $dropMenu = $env{'form.GD_SEL'.$question.'_'.$partid};
 		if ($dropMenu eq 'excused') {
 		    $partial = '';
 		    $score = 'excused';
 		} elsif ($dropMenu eq 'reset status'
-			 && $ENV{'form.solved'.$question.'_'.$partid} ne '') { #update only if previous record exists
+			 && $env{'form.solved'.$question.'_'.$partid} ne '') { #update only if previous record exists
 		    $newrecord{'resource.'.$partid.'.tries'} = 0;
 		    $newrecord{'resource.'.$partid.'.solved'} = '';
 		    $newrecord{'resource.'.$partid.'.award'} = '';
 		    $newrecord{'resource.'.$partid.'.awarded'} = 0;
-		    $newrecord{'resource.'.$partid.'.regrader'} = "$ENV{'user.name'}:$ENV{'user.domain'}";
+		    $newrecord{'resource.'.$partid.'.regrader'} = "$env{'user.name'}:$env{'user.domain'}";
 		    $changeflag++;
 		    $newpts = '';
+                    
+                    my $aggtries =  $env{'form.aggtries'.$question.'_'.$partid};
+                    my $totaltries = $env{'form.totaltries'.$question.'_'.$partid};
+                    my $solvedstatus = $env{'form.solved'.$question.'_'.$partid};
+                    if ($aggtries > 0) {
+                        &decrement_aggs($symbx,$partid,\%aggregate,$aggtries,$totaltries,$solvedstatus);
+                        $aggregateflag = 1;
+                    }
 		}
-
-		my $oldstatus = $ENV{'form.solved'.$question.'_'.$partid};
-		$displayPts[0].='&nbsp;<b>Part</b> '.$partid.' = '.
+		my $display_part=&get_display_part($partid,$curRes->symb());
+		my $oldstatus = $env{'form.solved'.$question.'_'.$partid};
+		$displayPts[0].='&nbsp;<b>Part:</b> '.$display_part.' = '.
 		    (($oldstatus eq 'excused') ? 'excused' : $oldpts).
-		    '&nbsp;<br>';
-		$displayPts[1].='&nbsp;<b>Part</b> '.$partid.' = '.
+		    '&nbsp;<br />';
+		$displayPts[1].='&nbsp;<b>Part:</b> '.$display_part.' = '.
 		     (($score eq 'excused') ? 'excused' : $newpts).
-		    '&nbsp;<br>';
-
+		    '&nbsp;<br />';
 		$question++;
-		next if ($dropMenu eq 'reset status' || ($newpts == $oldpts && $score ne 'excused'));
+		next if ($dropMenu eq 'reset status' || ($newpts eq $oldpts && $score ne 'excused'));
 
 		$newrecord{'resource.'.$partid.'.awarded'}  = $partial if $partial ne '';
 		$newrecord{'resource.'.$partid.'.solved'}   = $score if $score ne '';
-		$newrecord{'resource.'.$partid.'.regrader'} = "$ENV{'user.name'}:$ENV{'user.domain'}"
+		$newrecord{'resource.'.$partid.'.regrader'} = "$env{'user.name'}:$env{'user.domain'}"
 		    if (scalar(keys(%newrecord)) > 0);
 
 		$changeflag++;
 	    }
 	    if (scalar(keys(%newrecord)) > 0) {
-		&Apache::lonnet::cstore(\%newrecord,$symbx,$ENV{'request.course.id'},
+		my %record = 
+		    &Apache::lonnet::restore($symbx,$env{'request.course.id'},
+					     $udom,$uname);
+
+		if (&Apache::lonnet::validCODE($env{'form.CODE'})) {
+		    $newrecord{'resource.CODE'} = $env{'form.CODE'};
+		} elsif (&Apache::lonnet::validCODE($record{'resource.CODE'})) {
+		    $newrecord{'resource.CODE'} = '';
+		}
+		&Apache::lonnet::cstore(\%newrecord,$symbx,$env{'request.course.id'},
 					$udom,$uname);
+		%record = &Apache::lonnet::restore($symbx,
+						   $env{'request.course.id'},
+						   $udom,$uname);
+		&check_and_remove_from_queue($parts,\%record,undef,$symbx,
+					     $cdom,$cnum,$udom,$uname);
 	    }
+	    
+            if ($aggregateflag) {
+                &Apache::lonnet::cinc('nohist_resourcetracker',\%aggregate,
+                      $env{'course.'.$env{'request.course.id'}.'.domain'},
+                      $env{'course.'.$env{'request.course.id'}.'.num'});
+            }
 
 	    $studentTable.='<td valign="top">'.$displayPts[0].'</td>'.
 		'<td valign="top">'.$displayPts[1].'</td>'.
 		'</tr>';
 
+	    $prob++;
 	}
         $curRes = $iterator->next();
     }
 
-    $navmap->untieHashes();
-
     $studentTable.='</td></tr></table></td></tr></table>';
-    $studentTable.=&show_grading_menu_form($ENV{'form.symb'},$ENV{'form.url'});
+    $studentTable.=&show_grading_menu_form($env{'form.symb'});
     my $grademsg=($changeflag == 0 ? 'No score was changed or updated.' :
 		  'The scores were changed for '.
 		  $changeflag.' problem'.($changeflag == 1 ? '.' : 's.'));
@@ -3120,25 +4417,97 @@ sub updateGradeByPage {
 #
 #------ start of section for handling grading by page/sequence ---------
 
+=pod
+
+=head1 Bubble sheet grading routines
+
+  For this documentation:
+
+   'scanline' refers to the full line of characters
+   from the file that we are parsing that represents one entire sheet
+
+   'bubble line' refers to the data
+   representing the line of bubbles that are on the physical bubble sheet
+
+
+The overall process is that a scanned in bubble sheet data is uploaded
+into a course. When a user wants to grade, they select a
+sequence/folder of resources, a file of bubble sheet info, and pick
+one of the predefined configurations for what each scanline looks
+like.
+
+Next each scanline is checked for any errors of either 'missing
+bubbles' (it's an error because it may have been mis-scanned
+because too light bubbling), 'double bubble' (each bubble line should
+have no more that one letter picked), invalid or duplicated CODE,
+invalid student ID
+
+If the CODE option is used that determines the randomization of the
+homework problems, either way the student ID is looked up into a
+username:domain.
+
+During the validation phase the instructor can choose to skip scanlines. 
+
+After the validation phase, there are now 3 bubble sheet files
+
+  scantron_original_filename (unmodified original file)
+  scantron_corrected_filename (file where the corrected information has replaced the original information)
+  scantron_skipped_filename (contains the exact text of scanlines that where skipped)
+
+Also there is a separate hash nohist_scantrondata that contains extra
+correction information that isn't representable in the bubble sheet
+file (see &scantron_getfile() for more information)
+
+After all scanlines are either valid, marked as valid or skipped, then
+foreach line foreach problem in the picked sequence, an ssi request is
+made that simulates a user submitting their selected letter(s) against
+the homework problem.
+
+=over 4
+
+=cut
+
+
+=pod 
+
+=item defaultFormData
+
+  Returns html hidden inputs used to hold context/default values.
+
+ Arguments:
+  $symb - $symb of the current resource 
+
+=cut
+
 sub defaultFormData {
-    my ($symb,$url)=@_;
+    my ($symb)=@_;
     return '
-      <input type="hidden" name="symb"    value="'.$symb.'" />'."\n".
-     '<input type="hidden" name="url"     value="'.$url.'" />'."\n".
-     '<input type="hidden" name="saveState" value="'.$ENV{'form.saveState'}.'" />'."\n".
-     '<input type="hidden" name="probTitle" value="'.$ENV{'form.probTitle'}.'" />'."\n";
+      <input type="hidden" name="symb"    value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+     '<input type="hidden" name="saveState" value="'.$env{'form.saveState'}.'" />'."\n".
+     '<input type="hidden" name="probTitle" value="'.$env{'form.probTitle'}.'" />'."\n";
 }
 
+=pod 
+
+=item getSequenceDropDown
+
+   Return html dropdown of possible sequences to grade
+ 
+ Arguments:
+   $symb - $symb of the current resource 
+
+=cut
+
 sub getSequenceDropDown {
-    my ($request,$symb)=@_;
+    my ($symb)=@_;
     my $result='<select name="selectpage">'."\n";
-    my ($titles,$symbx) = &getSymbMap($request);
-    my ($curpage,$type,$mapId) = ($symb =~ /(.*?\.(page|sequence))___(\d+)___/); 
+    my ($titles,$symbx) = &getSymbMap();
+    my ($curpage)=&Apache::lonnet::decode_symb($symb); 
     my $ctr=0;
     foreach (@$titles) {
 	my ($minder,$showtitle) = ($_ =~ /(\d+)\.(.*)/);
 	$result.='<option value="'.$$symbx{$_}.'" '.
-	    ($$symbx{$_} =~ /$curpage$/ ? 'selected="on"' : '').
+	    ($$symbx{$_} =~ /$curpage$/ ? 'selected="selected"' : '').
 	    '>'.$showtitle.'</option>'."\n";
 	$ctr++;
     }
@@ -3146,23 +4515,65 @@ sub getSequenceDropDown {
     return $result;
 }
 
+
+=pod 
+
+=item scantron_filenames
+
+   Returns a list of the scantron files in the current course 
+
+=cut
+
+sub scantron_filenames {
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my @files=&Apache::lonnet::dirlist('userfiles',$cdom,$cname,
+				    &propath($cdom,$cname));
+    my @possiblenames;
+    foreach my $filename (sort(@files)) {
+	($filename)=split(/&/,$filename);
+	if ($filename!~/^scantron_orig_/) { next ; }
+	$filename=~s/^scantron_orig_//;
+	push(@possiblenames,$filename);
+    }
+    return @possiblenames;
+}
+
+=pod 
+
+=item scantron_uploads
+
+   Returns  html drop-down list of scantron files in current course.
+
+ Arguments:
+   $file2grade - filename to set as selected in the dropdown
+
+=cut
+
 sub scantron_uploads {
-    if (!-e $Apache::lonnet::perlvar{'lonScansDir'}) { return ''};
+    my ($file2grade) = @_;
     my $result=	'<select name="scantron_selectfile">';
-    opendir(DIR,$Apache::lonnet::perlvar{'lonScansDir'});
-    my @files=sort(readdir(DIR));
-    foreach my $filename (@files) {
-	if ($filename eq '.' or $filename eq '..') { next; }
-	$result.="<option>$filename</option>\n";
+    $result.="<option></option>";
+    foreach my $filename (sort(&scantron_filenames())) {
+	$result.="<option".($filename eq $file2grade ? ' selected="selected"':'').">$filename</option>\n";
     }
-    closedir(DIR);
     $result.="</select>";
     return $result;
 }
 
+=pod 
+
+=item scantron_scantab
+
+  Returns html drop down of the scantron formats in the scantronformat.tab
+  file.
+
+=cut
+
 sub scantron_scantab {
     my $fh=Apache::File->new($Apache::lonnet::perlvar{'lonTabDir'}.'/scantronformat.tab');
     my $result='<select name="scantron_format">'."\n";
+    $result.='<option></option>'."\n";
     foreach my $line (<$fh>) {
 	my ($name,$descrip)=split(/:/,$line);
 	if ($name =~ /^\#/) { next; }
@@ -3173,60 +4584,280 @@ sub scantron_scantab {
     return $result;
 }
 
+=pod 
+
+=item scantron_CODElist
+
+  Returns html drop down of the saved CODE lists from current course,
+  generated from earlier printings.
+
+=cut
+
+sub scantron_CODElist {
+    my $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $cnum = $env{'course.'.$env{'request.course.id'}.'.num'};
+    my @names=&Apache::lonnet::getkeys('CODEs',$cdom,$cnum);
+    my $namechoice='<option></option>';
+    foreach my $name (sort {uc($a) cmp uc($b)} @names) {
+	if ($name =~ /^error: 2 /) { next; }
+	if ($name =~ /^type\0/) { next; }
+	$namechoice.='<option value="'.$name.'">'.$name.'</option>';
+    }
+    $namechoice='<select name="scantron_CODElist">'.$namechoice.'</select>';
+    return $namechoice;
+}
+
+=pod 
+
+=item scantron_CODEunique
+
+  Returns the html for "Each CODE to be used once" radio.
+
+=cut
+
+sub scantron_CODEunique {
+    my $result='<span style="white-space: nowrap;">
+                 <label><input type="radio" name="scantron_CODEunique"
+                        value="yes" checked="checked" />'.&mt('Yes').' </label>
+                </span>
+                <span style="white-space: nowrap;">
+                 <label><input type="radio" name="scantron_CODEunique"
+                        value="no" />'.&mt('No').' </label>
+                </span>';
+    return $result;
+}
+
+=pod 
+
+=item scantron_selectphase
+
+  Generates the initial screen to start the bubble sheet process.
+  Allows for - starting a grading run.
+             - downloading existing scan data (original, corrected
+                                                or skipped info)
+
+             - uploading new scan data
+
+ Arguments:
+  $r          - The Apache request object
+  $file2grade - name of the file that contain the scanned data to score
+
+=cut
+
 sub scantron_selectphase {
-    my ($r) = @_;
-    my ($symb,$url)=&get_symb_and_url($r);
+    my ($r,$file2grade) = @_;
+    my ($symb)=&get_symb($r);
     if (!$symb) {return '';}
-    my $sequence_selector=&getSequenceDropDown($r,$symb);
-    my $default_form_data=&defaultFormData($symb,$url);
-    my $grading_menu_button=&show_grading_menu_form($symb,$url);
-    my $file_selector=&scantron_uploads();
+    my $sequence_selector=&getSequenceDropDown($symb);
+    my $default_form_data=&defaultFormData($symb);
+    my $grading_menu_button=&show_grading_menu_form($symb);
+    my $file_selector=&scantron_uploads($file2grade);
     my $format_selector=&scantron_scantab();
+    my $CODE_selector=&scantron_CODElist();
+    my $CODE_unique=&scantron_CODEunique();
     my $result;
+
+    # Chunk of form to prompt for a file to grade and how:
+
     $result.= <<SCANTRONFORM;
-<form method="post" enctype="multipart/form-data" action="/adm/grades" name="scantro_process">
-  <input type="hidden" name="command" value="scantron_process" />
-  $default_form_data
-  <table width="100%" border="0">
+    <table width="100%" border="0">
     <tr>
+     <form method="post" enctype="multipart/form-data" action="/adm/grades" name="scantron_process">
       <td bgcolor="#777777">
+       <input type="hidden" name="command" value="scantron_warning" />
+        $default_form_data
         <table width="100%" border="0">
           <tr bgcolor="#e6ffff">
-            <td>
-              &nbsp;<b>Specify file location and which Folder/Sequence to grade</b>
+            <td colspan="2">
+              &nbsp;<b>Specify file and which Folder/Sequence to grade</b>
             </td>
           </tr>
           <tr bgcolor="#ffffe6">
+            <td> Sequence to grade: </td><td> $sequence_selector </td>
+          </tr>
+          <tr bgcolor="#ffffe6">
+            <td> Filename of scoring office file: </td><td> $file_selector </td>
+          </tr>
+          <tr bgcolor="#ffffe6">
+            <td> Format of data file: </td><td> $format_selector </td>
+          </tr>
+          <tr bgcolor="#ffffe6">
+            <td> Saved CODEs to validate against: </td><td> $CODE_selector</td>
+          </tr>
+          <tr bgcolor="#ffffe6">
+            <td> Each CODE is only to be used once:</td><td> $CODE_unique </td>
+          </tr>
+          <tr bgcolor="#ffffe6">
+	    <td> Options: </td>
             <td>
-               Sequence to grade: $sequence_selector
+	       <label><input type="checkbox" name="scantron_options_redo" value="redo_skipped"/> Do only previously skipped records</label> <br />
+               <label><input type="checkbox" name="scantron_options_ignore" value="ignore_corrections"/> Remove all existing corrections</label> <br />
+               <label><input type="checkbox" name="scantron_options_hidden" value="ignore_hidden"/> Skip hidden resources when grading</label>
 	    </td>
           </tr>
           <tr bgcolor="#ffffe6">
+            <td colspan="2">
+              <input type="submit" value="Grading: Validate Scantron Records" />
+            </td>
+          </tr>
+        </table>
+       </td>
+     </form>
+    </tr>
+SCANTRONFORM
+   
+    $r->print($result);
+
+    if (&Apache::lonnet::allowed('usc',$env{'request.role.domain'}) ||
+        &Apache::lonnet::allowed('usc',$env{'request.course.id'})) {
+
+	# Chunk of form to prompt for a scantron file upload.
+
+        $r->print(<<SCANTRONFORM);
+    <tr>
+      <td bgcolor="#777777">
+        <table width="100%" border="0">
+          <tr bgcolor="#e6ffff">
             <td>
-		Filename of scoring office file: $file_selector
-	    </td>
+              &nbsp;<b>Specify a Scantron data file to upload.</b>
+            </td>
           </tr>
           <tr bgcolor="#ffffe6">
             <td>
-              Format of data file: $format_selector
-	    </td>
+SCANTRONFORM
+    my $default_form_data=&defaultFormData(&get_symb($r,1));
+    my $cdom= $env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $cnum= $env{'course.'.$env{'request.course.id'}.'.num'};
+    $r->print(<<UPLOAD);
+              <script type="text/javascript" language="javascript">
+    function checkUpload(formname) {
+	if (formname.upfile.value == "") {
+	    alert("Please use the browse button to select a file from your local directory.");
+	    return false;
+	}
+	formname.submit();
+    }
+              </script>
+
+              <form enctype='multipart/form-data' action='/adm/grades' name='rules' method='post'>
+                $default_form_data
+                <input name='courseid' type='hidden' value='$cnum' />
+                <input name='domainid' type='hidden' value='$cdom' />
+                <input name='command' value='scantronupload_save' type='hidden' />
+                File to upload:<input type="file" name="upfile" size="50" />
+                <br />
+                <input type="button" onClick="javascript:checkUpload(this.form);" value="Upload Scantron Data" />
+              </form>
+UPLOAD
+
+        $r->print(<<SCANTRONFORM);
+            </td>
           </tr>
         </table>
       </td>
     </tr>
+SCANTRONFORM
+    }
+
+    # Chunk of the form that prompts to view a scoring office file,
+    # corrected file, skipped records in a file.
+
+    $r->print(<<SCANTRONFORM);
+    <tr>
+      <form action='/adm/grades' name='scantron_download'>
+        <td bgcolor="#777777">
+	  $default_form_data
+          <input type="hidden" name="command" value="scantron_download" />
+          <table width="100%" border="0">
+            <tr bgcolor="#e6ffff">
+              <td colspan="2">
+                &nbsp;<b>Download a scoring office file</b>
+              </td>
+            </tr>
+            <tr bgcolor="#ffffe6">
+              <td> Filename of scoring office file: </td><td> $file_selector </td>
+            </tr>
+            <tr bgcolor="#ffffe6">
+              <td colspan="2">
+                <input type="submit" value="Download: Show List of Associated Files" />
+              </td>
+            </tr>
+          </table>
+        </td>
+      </form>
+    </tr>
+SCANTRONFORM
+
+    $r->print(<<SCANTRONFORM);
   </table>
-  <input type="submit" value="Submit" />
-</form>
 $grading_menu_button
 SCANTRONFORM
 
-    return $result;
+    return
 }
 
+=pod
+
+=item get_scantron_config
+
+   Parse and return the scantron configuration line selected as a
+   hash of configuration file fields.
+
+ Arguments:
+    which - the name of the configuration to parse from the file.
+
+
+ Returns:
+            If the named configuration is not in the file, an empty
+            hash is returned.
+    a hash with the fields
+      name         - internal name for the this configuration setup
+      description  - text to display to operator that describes this config
+      CODElocation - if 0 or the string 'none'
+                          - no CODE exists for this config
+                     if -1 || the string 'letter'
+                          - a CODE exists for this config and is
+                            a string of letters
+                     Unsupported value (but planned for future support)
+                          if a positive integer
+                               - The CODE exists as the first n items from
+                                 the question section of the form
+                          if the string 'number'
+                               - The CODE exists for this config and is
+                                 a string of numbers
+      CODEstart   - (only matter if a CODE exists) column in the line where
+                     the CODE starts
+      CODElength  - length of the CODE
+      IDstart     - column where the student ID number starts
+      IDlength    - length of the student ID info
+      Qstart      - column where the information from the bubbled
+                    'questions' start
+      Qlength     - number of columns comprising a single bubble line from
+                    the sheet. (usually either 1 or 10)
+      Qon         - either a single character representing the character used
+                    to signal a bubble was chosen in the positional setup, or
+                    the string 'letter' if the letter of the chosen bubble is
+                    in the final, or 'number' if a number representing the
+                    chosen bubble is in the file (1->A 0->J)
+      Qoff        - the character used to represent that a bubble was
+                    left blank
+      PaperID     - if the scanning process generates a unique number for each
+                    sheet scanned the column that this ID number starts in
+      PaperIDlength - number of columns that comprise the unique ID number
+                      for the sheet of paper
+      FirstName   - column that the first name starts in
+      FirstNameLength - number of columns that the first name spans
+ 
+      LastName    - column that the last name starts in
+      LastNameLength - number of columns that the last name spans
+
+=cut
+
 sub get_scantron_config {
     my ($which) = @_;
     my $fh=Apache::File->new($Apache::lonnet::perlvar{'lonTabDir'}.'/scantronformat.tab');
     my %config;
+    #FIXME probably should move to XML it has already gotten a bit much now
     foreach my $line (<$fh>) {
 	my ($name,$descrip)=split(/:/,$line);
 	if ($name ne $which ) { next; }
@@ -3243,11 +4874,36 @@ sub get_scantron_config {
 	$config{'Qlength'}=$config[8];
 	$config{'Qoff'}=$config[9];
 	$config{'Qon'}=$config[10];
+	$config{'PaperID'}=$config[11];
+	$config{'PaperIDlength'}=$config[12];
+	$config{'FirstName'}=$config[13];
+	$config{'FirstNamelength'}=$config[14];
+	$config{'LastName'}=$config[15];
+	$config{'LastNamelength'}=$config[16];
 	last;
     }
     return %config;
 }
 
+=pod 
+
+=item username_to_idmap
+
+    creates a hash keyed by student id with values of the corresponding
+    student username:domain.
+
+  Arguments:
+
+    $classlist - reference to the class list hash. This is a hash
+                 keyed by student name:domain  whose elements are references
+                 to arrays containing various chunks of information
+                 about the student. (See loncoursedata for more info).
+
+  Returns
+    %idmap - the constructed hash
+
+=cut
+
 sub username_to_idmap {
     my ($classlist)= @_;
     my %idmap;
@@ -3258,21 +4914,223 @@ sub username_to_idmap {
     return %idmap;
 }
 
+=pod
+
+=item scantron_fixup_scanline
+
+   Process a requested correction to a scanline.
+
+  Arguments:
+    $scantron_config   - hash from &get_scantron_config()
+    $scan_data         - hash of correction information 
+                          (see &scantron_getfile())
+    $line              - existing scanline
+    $whichline         - line number of the passed in scanline
+    $field             - type of change to process 
+                         (either 
+                          'ID'     -> correct the student ID number
+                          'CODE'   -> correct the CODE
+                          'answer' -> fixup the submitted answers)
+    
+   $args               - hash of additional info,
+                          - 'ID' 
+                               'newid' -> studentID to use in replacement
+                                          of existing one
+                          - 'CODE' 
+                               'CODE_ignore_dup' - set to true if duplicates
+                                                   should be ignored.
+	                       'CODE' - is new code or 'use_unfound'
+                                        if the existing unfound code should
+                                        be used as is
+                          - 'answer'
+                               'response' - new answer or 'none' if blank
+                               'question' - the bubble line to change
+
+  Returns:
+    $line - the modified scanline
+
+  Side effects: 
+    $scan_data - may be updated
+
+=cut
+
+
+sub scantron_fixup_scanline {
+    my ($scantron_config,$scan_data,$line,$whichline,$field,$args)=@_;
+
+    if ($field eq 'ID') {
+	if (length($args->{'newid'}) > $$scantron_config{'IDlength'}) {
+	    return ($line,1,'New value too large');
+	}
+	if (length($args->{'newid'}) < $$scantron_config{'IDlength'}) {
+	    $args->{'newid'}=sprintf('%-'.$$scantron_config{'IDlength'}.'s',
+				     $args->{'newid'});
+	}
+	substr($line,$$scantron_config{'IDstart'}-1,
+	       $$scantron_config{'IDlength'})=$args->{'newid'};
+	if ($args->{'newid'}=~/^\s*$/) {
+	    &scan_data($scan_data,"$whichline.user",
+		       $args->{'username'}.':'.$args->{'domain'});
+	}
+    } elsif ($field eq 'CODE') {
+	if ($args->{'CODE_ignore_dup'}) {
+	    &scan_data($scan_data,"$whichline.CODE_ignore_dup",'1');
+	}
+	&scan_data($scan_data,"$whichline.useCODE",'1');
+	if ($args->{'CODE'} ne 'use_unfound') {
+	    if (length($args->{'CODE'}) > $$scantron_config{'CODElength'}) {
+		return ($line,1,'New CODE value too large');
+	    }
+	    if (length($args->{'CODE'}) < $$scantron_config{'CODElength'}) {
+		$args->{'CODE'}=sprintf('%-'.$$scantron_config{'CODElength'}.'s',$args->{'CODE'});
+	    }
+	    substr($line,$$scantron_config{'CODEstart'}-1,
+		   $$scantron_config{'CODElength'})=$args->{'CODE'};
+	}
+    } elsif ($field eq 'answer') {
+	my $length=$scantron_config->{'Qlength'};
+	my $off=$scantron_config->{'Qoff'};
+	my $on=$scantron_config->{'Qon'};
+	my $answer=${off}x$length;
+	if ($args->{'response'} eq 'none') {
+	    &scan_data($scan_data,
+		       "$whichline.no_bubble.".$args->{'question'},'1');
+	} else {
+	    if ($on eq 'letter') {
+		my @alphabet=('A'..'Z');
+		$answer=$alphabet[$args->{'response'}];
+	    } elsif ($on eq 'number') {
+		$answer=$args->{'response'}+1;
+		if ($answer == 10) { $answer = '0'; }
+	    } else {
+		substr($answer,$args->{'response'},1)=$on;
+	    }
+	    &scan_data($scan_data,
+		       "$whichline.no_bubble.".$args->{'question'},undef,'1');
+	}
+	my $where=$length*($args->{'question'}-1)+$scantron_config->{'Qstart'};
+	substr($line,$where-1,$length)=$answer;
+    }
+    return $line;
+}
+
+=pod
+
+=item scan_data
+
+    Edit or look up  an item in the scan_data hash.
+
+  Arguments:
+    $scan_data  - The hash (see scantron_getfile)
+    $key        - shorthand of the key to edit (actual key is
+                  scantronfilename_key).
+    $data        - New value of the hash entry.
+    $delete      - If true, the entry is removed from the hash.
+
+  Returns:
+    The new value of the hash table field (undefined if deleted).
+
+=cut
+
+
+sub scan_data {
+    my ($scan_data,$key,$value,$delete)=@_;
+    my $filename=$env{'form.scantron_selectfile'};
+    if (defined($value)) {
+	$scan_data->{$filename.'_'.$key} = $value;
+    }
+    if ($delete) { delete($scan_data->{$filename.'_'.$key}); }
+    return $scan_data->{$filename.'_'.$key};
+}
+
+=pod 
+
+=item scantron_parse_scanline
+
+  Decodes a scanline from the selected scantron file
+
+ Arguments:
+    line             - The text of the scantron file line to process
+    whichline        - Line number
+    scantron_config  - Hash describing the format of the scantron lines.
+    scan_data        - Hash of extra information about the scanline
+                       (see scantron_getfile for more information)
+    just_header      - True if should not process question answers but only
+                       the stuff to the left of the answers.
+ Returns:
+   Hash containing the result of parsing the scanline
+
+   Keys are all proceeded by the string 'scantron.'
+
+       CODE    - the CODE in use for this scanline
+       useCODE - 1 if the CODE is invalid but it usage has been forced
+                 by the operator
+       CODE_ignore_dup - 1 if the CODE is a duplicated use when unique
+                            CODEs were selected, but the usage has been
+                            forced by the operator
+       ID  - student ID
+       PaperID - if used, the ID number printed on the sheet when the 
+                 paper was scanned
+       FirstName - first name from the sheet
+       LastName  - last name from the sheet
+
+     if just_header was not true these key may also exist
+
+       missingerror - a list of bubbled line numbers that had a blank bubble
+                      that is considered an error (if the operator had already
+                      okayed a blank bubble line as really being blank then
+                      that bubble line number won't appear here.
+       doubleerror  - a list of bubbled line numbers that had more than one
+                      bubble filled in and has not been corrected by the
+                      operator
+       maxquest     - the number of the last bubble line that was parsed
+
+       (<number> starts at 1)
+       <number>.answer - zero or more letters representing the selected
+                         letters from the scanline for the bubble line 
+                         <number>.
+                         if blank there was either no bubble or there where
+                         multiple bubbles, (consult the keys missingerror and
+                         doubleerror if this is an error condition)
+
+=cut
+
 sub scantron_parse_scanline {
-    my ($line,$scantron_config)=@_;
+    my ($line,$whichline,$scantron_config,$scan_data,$just_header)=@_;
     my %record;
-    my $questions=substr($line,$$scantron_config{'Qstart'}-1);
-    my $data=substr($line,0,$$scantron_config{'Qstart'}-1);
-    if ($$scantron_config{'CODElocation'} ne 0) {
-	if ($$scantron_config{'CODElocation'} < 0) {
-	    $record{'scantron.CODE'}=substr($data,$$scantron_config{'CODEstart'}-1,
+    my $questions=substr($line,$$scantron_config{'Qstart'}-1);  # Answers
+    my $data=substr($line,0,$$scantron_config{'Qstart'}-1);     # earlier stuff
+    if (!($$scantron_config{'CODElocation'} eq 0 ||
+	  $$scantron_config{'CODElocation'} eq 'none')) {
+	if ($$scantron_config{'CODElocation'} < 0 ||
+	    $$scantron_config{'CODElocation'} eq 'letter' ||
+	    $$scantron_config{'CODElocation'} eq 'number') {
+	    $record{'scantron.CODE'}=substr($data,
+					    $$scantron_config{'CODEstart'}-1,
 					    $$scantron_config{'CODElength'});
+	    if (&scan_data($scan_data,"$whichline.useCODE")) {
+		$record{'scantron.useCODE'}=1;
+	    }
+	    if (&scan_data($scan_data,"$whichline.CODE_ignore_dup")) {
+		$record{'scantron.CODE_ignore_dup'}=1;
+	    }
 	} else {
 	    #FIXME interpret first N questions
 	}
     }
     $record{'scantron.ID'}=substr($data,$$scantron_config{'IDstart'}-1,
 				  $$scantron_config{'IDlength'});
+    $record{'scantron.PaperID'}=
+	substr($data,$$scantron_config{'PaperID'}-1,
+	       $$scantron_config{'PaperIDlength'});
+    $record{'scantron.FirstName'}=
+	substr($data,$$scantron_config{'FirstName'}-1,
+	       $$scantron_config{'FirstNamelength'});
+    $record{'scantron.LastName'}=
+	substr($data,$$scantron_config{'LastName'}-1,
+	       $$scantron_config{'LastNamelength'});
+    if ($just_header) { return \%record; }
+
     my @alphabet=('A'..'Z');
     my $questnum=0;
     while ($questions) {
@@ -3280,59 +5138,1518 @@ sub scantron_parse_scanline {
 	my $currentquest=substr($questions,0,$$scantron_config{'Qlength'});
 	substr($questions,0,$$scantron_config{'Qlength'})='';
 	if (length($currentquest) < $$scantron_config{'Qlength'}) { next; }
-	my (@array)=split(/$$scantron_config{'Qon'}/,$currentquest);
-	if (scalar(@array) gt 2) {
-	    #FIXME do something intelligent with double bubbles
-	    Apache->request->print("<br ><b>Wha!!!</b> <pre>".scalar(@array).
-				   '-'.$currentquest.'-'.$questnum.'</pre><br />');
-	}
-	if (length($array[0]) eq $$scantron_config{'Qlength'}) {
-	    $record{"scantron.$questnum.answer"}='';
+	if ($$scantron_config{'Qon'} eq 'letter') {
+	    if ($currentquest eq '?'
+		|| $currentquest eq '*') {
+		push(@{$record{'scantron.doubleerror'}},$questnum);
+		$record{"scantron.$questnum.answer"}='';
+	    } elsif (!defined($currentquest)
+		     || $currentquest eq $$scantron_config{'Qoff'}
+		     || $currentquest !~ /^[A-Z]$/) {
+		$record{"scantron.$questnum.answer"}='';
+		if (!&scan_data($scan_data,"$whichline.no_bubble.$questnum")) {
+		    push(@{$record{"scantron.missingerror"}},$questnum);
+		}
+	    } else {
+		$record{"scantron.$questnum.answer"}=$currentquest;
+	    }
+	} elsif ($$scantron_config{'Qon'} eq 'number') {
+	    if ($currentquest eq '?'
+		|| $currentquest eq '*') {
+		push(@{$record{'scantron.doubleerror'}},$questnum);
+		$record{"scantron.$questnum.answer"}='';
+	    } elsif (!defined($currentquest)
+		     || $currentquest eq $$scantron_config{'Qoff'} 
+		     || $currentquest !~ /^\d$/) {
+		$record{"scantron.$questnum.answer"}='';
+		if (!&scan_data($scan_data,"$whichline.no_bubble.$questnum")) {
+		    push(@{$record{"scantron.missingerror"}},$questnum);
+		}
+	    } else {
+		# wrap zero back to J
+		if ($currentquest eq '0') {
+		    $record{"scantron.$questnum.answer"}=
+			$alphabet[9];
+		} else {
+		    $record{"scantron.$questnum.answer"}=
+			$alphabet[$currentquest-1];
+		}
+	    }
 	} else {
-	    $record{"scantron.$questnum.answer"}=$alphabet[length($array[0])];
+	    my @array=split($$scantron_config{'Qon'},$currentquest,-1);
+	    if (length($array[0]) eq $$scantron_config{'Qlength'}) {
+		$record{"scantron.$questnum.answer"}='';
+		if (!&scan_data($scan_data,"$whichline.no_bubble.$questnum")) {
+		    push(@{$record{"scantron.missingerror"}},$questnum);
+		}
+	    } else {
+		$record{"scantron.$questnum.answer"}=
+		    $alphabet[length($array[0])];
+	    }
+	    if (scalar(@array) gt 2) {
+		push(@{$record{'scantron.doubleerror'}},$questnum);
+		my @ans=@array;
+		my $i=length($ans[0]);shift(@ans);
+		while ($#ans) {
+		    $i+=length($ans[0])+1;
+		    $record{"scantron.$questnum.answer"}.=$alphabet[$i];
+		    shift(@ans);
+		}
+	    }
 	}
     }
     $record{'scantron.maxquest'}=$questnum;
     return \%record;
 }
 
+=pod
+
+=item scantron_add_delay
+
+   Adds an error message that occurred during the grading phase to a
+   queue of messages to be shown after grading pass is complete
+
+ Arguments:
+   $delayqueue  - arrary ref of hash ref of error messages
+   $scanline    - the scanline that caused the error
+   $errormesage - the error message
+   $errorcode   - a numeric code for the error
+
+ Side Effects:
+   updates the $delayqueue to have a new hash ref of the error
+
+=cut
+
 sub scantron_add_delay {
+    my ($delayqueue,$scanline,$errormessage,$errorcode)=@_;
+    push(@$delayqueue,
+	 {'line' => $scanline, 'emsg' => $errormessage,
+	  'ecode' => $errorcode }
+	 );
 }
 
+=pod
+
+=item scantron_find_student
+
+   Finds the username for the current scanline
+
+  Arguments:
+   $scantron_record - hash result from scantron_parse_scanline
+   $scan_data       - hash of correction information 
+                      (see &scantron_getfile() form more information)
+   $idmap           - hash from &username_to_idmap()
+   $line            - number of current scanline
+ 
+  Returns:
+   Either 'username:domain' or undef if unknown
+
+=cut
+
 sub scantron_find_student {
-    my ($scantron_record,$idmap)=@_;
+    my ($scantron_record,$scan_data,$idmap,$line)=@_;
     my $scanID=$$scantron_record{'scantron.ID'};
+    if ($scanID =~ /^\s*$/) {
+ 	return &scan_data($scan_data,"$line.user");
+    }
     foreach my $id (keys(%$idmap)) {
-	Apache->request->print('<pre>checking studnet -'.$id.'- againt -'.$scanID.'- </pre>');
-	if (lc($id) eq lc($scanID)) { Apache->request->print('success');return $$idmap{$id}; }
+ 	if (lc($id) eq lc($scanID)) {
+ 	    return $$idmap{$id};
+ 	}
     }
     return undef;
 }
 
+=pod
+
+=item scantron_filter
+
+   Filter sub for lonnavmaps, filters out hidden resources if ignore
+   hidden resources was selected
+
+=cut
+
 sub scantron_filter {
     my ($curres)=@_;
-    if (ref($curres) && $curres->is_problem() && !$curres->randomout) {
+
+    if (ref($curres) && $curres->is_problem()) {
+	# if the user has asked to not have either hidden
+	# or 'randomout' controlled resources to be graded
+	# don't include them
+	if ($env{'form.scantron_options_hidden'} eq 'ignore_hidden'
+	    && $curres->randomout) {
+	    return 0;
+	}
 	return 1;
     }
     return 0;
 }
 
+=pod
+
+=item scantron_process_corrections
+
+   Gets correction information out of submitted form data and corrects
+   the scanline
+
+=cut
+
+sub scantron_process_corrections {
+    my ($r) = @_;
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    my $classlist=&Apache::loncoursedata::get_classlist();
+    my $which=$env{'form.scantron_line'};
+    my $line=&scantron_get_line($scanlines,$scan_data,$which);
+    my ($skip,$err,$errmsg);
+    if ($env{'form.scantron_skip_record'}) {
+	$skip=1;
+    } elsif ($env{'form.scantron_corrections'} =~ /^(duplicate|incorrect)ID$/) {
+	my $newstudent=$env{'form.scantron_username'}.':'.
+	    $env{'form.scantron_domain'};
+	my $newid=$classlist->{$newstudent}->[&Apache::loncoursedata::CL_ID];
+	($line,$err,$errmsg)=
+	    &scantron_fixup_scanline(\%scantron_config,$scan_data,$line,$which,
+				     'ID',{'newid'=>$newid,
+				    'username'=>$env{'form.scantron_username'},
+				    'domain'=>$env{'form.scantron_domain'}});
+    } elsif ($env{'form.scantron_corrections'} =~ /^(duplicate|incorrect)CODE$/) {
+	my $resolution=$env{'form.scantron_CODE_resolution'};
+	my $newCODE;
+	my %args;
+	if      ($resolution eq 'use_unfound') {
+	    $newCODE='use_unfound';
+	} elsif ($resolution eq 'use_found') {
+	    $newCODE=$env{'form.scantron_CODE_selectedvalue'};
+	} elsif ($resolution eq 'use_typed') {
+	    $newCODE=$env{'form.scantron_CODE_newvalue'};
+	} elsif ($resolution =~ /^use_closest_(\d+)/) {
+	    $newCODE=$env{"form.scantron_CODE_closest_$1"};
+	}
+	if ($env{'form.scantron_corrections'} eq 'duplicateCODE') {
+	    $args{'CODE_ignore_dup'}=1;
+	}
+	$args{'CODE'}=$newCODE;
+	($line,$err,$errmsg)=
+	    &scantron_fixup_scanline(\%scantron_config,$scan_data,$line,$which,
+				     'CODE',\%args);
+    } elsif ($env{'form.scantron_corrections'} =~ /^(missing|double)bubble$/) {
+	foreach my $question (split(',',$env{'form.scantron_questions'})) {
+	    ($line,$err,$errmsg)=
+		&scantron_fixup_scanline(\%scantron_config,$scan_data,$line,
+					 $which,'answer',
+					 { 'question'=>$question,
+		       'response'=>$env{"form.scantron_correct_Q_$question"}});
+	    if ($err) { last; }
+	}
+    }
+    if ($err) {
+	$r->print("<span class=\"LC_warning\">Unable to accept last correction, an error occurred :$errmsg:</span>");
+    } else {
+	&scantron_put_line($scanlines,$scan_data,$which,$line,$skip);
+	&scantron_putfile($scanlines,$scan_data);
+    }
+}
+
+=pod
+
+=item reset_skipping_status
+
+   Forgets the current set of remember skipped scanlines (and thus
+   reverts back to considering all lines in the
+   scantron_skipped_<filename> file)
+
+=cut
+
+sub reset_skipping_status {
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    &scan_data($scan_data,'remember_skipping',undef,1);
+    &scantron_putfile(undef,$scan_data);
+}
+
+=pod
+
+=item start_skipping
+
+   Marks a scanline to be skipped. 
+
+=cut
+
+sub start_skipping {
+    my ($scan_data,$i)=@_;
+    my %remembered=split(':',&scan_data($scan_data,'remember_skipping'));
+    if ($env{'form.scantron_options_redo'} =~ /^redo_/) {
+	$remembered{$i}=2;
+    } else {
+	$remembered{$i}=1;
+    }
+    &scan_data($scan_data,'remember_skipping',join(':',%remembered));
+}
+
+=pod
+
+=item should_be_skipped
+
+   Checks whether a scanline should be skipped.
+
+=cut
+
+sub should_be_skipped {
+    my ($scanlines,$scan_data,$i)=@_;
+    if ($env{'form.scantron_options_redo'} !~ /^redo_/) {
+	# not redoing old skips
+	if ($scanlines->{'skipped'}[$i]) { return 1; }
+	return 0;
+    }
+    my %remembered=split(':',&scan_data($scan_data,'remember_skipping'));
+
+    if (exists($remembered{$i}) && $remembered{$i} != 2 ) {
+	return 0;
+    }
+    return 1;
+}
+
+=pod
+
+=item remember_current_skipped
+
+   Discovers what scanlines are in the scantron_skipped_<filename>
+   file and remembers them into scan_data for later use.
+
+=cut
+
+sub remember_current_skipped {
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    my %to_remember;
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	if ($scanlines->{'skipped'}[$i]) {
+	    $to_remember{$i}=1;
+	}
+    }
+
+    &scan_data($scan_data,'remember_skipping',join(':',%to_remember));
+    &scantron_putfile(undef,$scan_data);
+}
+
+=pod
+
+=item check_for_error
+
+    Checks if there was an error when attempting to remove a specific
+    scantron_.. bubble sheet data file. Prints out an error if
+    something went wrong.
+
+=cut
+
+sub check_for_error {
+    my ($r,$result)=@_;
+    if ($result ne 'ok' && $result ne 'not_found' ) {
+	$r->print("An error occurred ($result) when trying to Remove the existing corrections.");
+    }
+}
+
+=pod
+
+=item scantron_warning_screen
+
+   Interstitial screen to make sure the operator has selected the
+   correct options before we start the validation phase.
+
+=cut
+
+sub scantron_warning_screen {
+    my ($button_text)=@_;
+    my $title=&Apache::lonnet::gettitle($env{'form.selectpage'});
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my $CODElist;
+    if ($scantron_config{'CODElocation'} &&
+	$scantron_config{'CODEstart'} &&
+	$scantron_config{'CODElength'}) {
+	$CODElist=$env{'form.scantron_CODElist'};
+	if ($env{'form.scantron_CODElist'} eq '') { $CODElist='<span class="LC_warning">None</span>'; }
+	$CODElist=
+	    '<tr><td><b>List of CODES to validate against:</b></td><td><tt>'.
+	    $env{'form.scantron_CODElist'}.'</tt></td></tr>';
+    }
+    return (<<STUFF);
+<p>
+<span class="LC_warning">Please double check the information
+                 below before clicking on '$button_text'</span>
+</p>
+<table>
+<tr><td><b>Sequence to be Graded:</b></td><td>$title</td></tr>
+<tr><td><b>Data File that will be used:</b></td><td><tt>$env{'form.scantron_selectfile'}</tt></td></tr>
+$CODElist
+</table>
+<br />
+<p> If this information is correct, please click on '$button_text'.</p>
+<p> If something is incorrect, please click the 'Grading Menu' button to start over.</p>
+
+<br />
+STUFF
+}
+
+=pod
+
+=item scantron_do_warning
+
+   Check if the operator has picked something for all required
+   fields. Error out if something is missing.
+
+=cut
+
+sub scantron_do_warning {
+    my ($r)=@_;
+    my ($symb)=&get_symb($r);
+    if (!$symb) {return '';}
+    my $default_form_data=&defaultFormData($symb);
+    $r->print(&scantron_form_start().$default_form_data);
+    if ( $env{'form.selectpage'} eq '' ||
+	 $env{'form.scantron_selectfile'} eq '' ||
+	 $env{'form.scantron_format'} eq '' ) {
+	$r->print("<p>You have forgetten to specify some information. Please go Back and try again.</p>");
+	if ( $env{'form.selectpage'} eq '') {
+	    $r->print('<p><span class="LC_error">You have not selected a Sequence to grade</span></p>');
+	} 
+	if ( $env{'form.scantron_selectfile'} eq '') {
+	    $r->print('<p><span class="LC_error">You have not selected a file that contains the student\'s response data.</span></p>');
+	} 
+	if ( $env{'form.scantron_format'} eq '') {
+	    $r->print('<p><span class="LC_error">You have not selected a the format of the student\'s response data.</span></p>');
+	} 
+    } else {
+	my $warning=&scantron_warning_screen('Grading: Validate Records');
+	$r->print(<<STUFF);
+$warning
+<input type="submit" name="submit" value="Grading: Validate Records" />
+<input type="hidden" name="command" value="scantron_validate" />
+STUFF
+    }
+    $r->print("</form><br />".&show_grading_menu_form($symb));
+    return '';
+}
+
+=pod
+
+=item scantron_form_start
+
+    html hidden input for remembering all selected grading options
+
+=cut
+
+sub scantron_form_start {
+    my ($max_bubble)=@_;
+    my $result= <<SCANTRONFORM;
+<form method="post" enctype="multipart/form-data" action="/adm/grades" name="scantronupload">
+  <input type="hidden" name="selectpage" value="$env{'form.selectpage'}" />
+  <input type="hidden" name="scantron_format" value="$env{'form.scantron_format'}" />
+  <input type="hidden" name="scantron_selectfile" value="$env{'form.scantron_selectfile'}" />
+  <input type="hidden" name="scantron_maxbubble" value="$max_bubble" />
+  <input type="hidden" name="scantron_CODElist" value="$env{'form.scantron_CODElist'}" />
+  <input type="hidden" name="scantron_CODEunique" value="$env{'form.scantron_CODEunique'}" />
+  <input type="hidden" name="scantron_options_redo" value="$env{'form.scantron_options_redo'}" />
+  <input type="hidden" name="scantron_options_ignore" value="$env{'form.scantron_options_ignore'}" />
+  <input type="hidden" name="scantron_options_hidden" value="$env{'form.scantron_options_hidden'}" />
+SCANTRONFORM
+    return $result;
+}
+
+=pod
+
+=item scantron_validate_file
+
+    Dispatch routine for doing validation of a bubble sheet data file.
+
+    Also processes any necessary information resets that need to
+    occur before validation begins (ignore previous corrections,
+    restarting the skipped records processing)
+
+=cut
+
+sub scantron_validate_file {
+    my ($r) = @_;
+    my ($symb)=&get_symb($r);
+    if (!$symb) {return '';}
+    my $default_form_data=&defaultFormData($symb);
+    
+    # do the detection of only doing skipped records first befroe we delete
+    # them when doing the corrections reset
+    if ($env{'form.scantron_options_redo'} ne 'redo_skipped_ready') {
+	&reset_skipping_status();
+    }
+    if ($env{'form.scantron_options_redo'} eq 'redo_skipped') {
+	&remember_current_skipped();
+	$env{'form.scantron_options_redo'}='redo_skipped_ready';
+    }
+
+    if ($env{'form.scantron_options_ignore'} eq 'ignore_corrections') {
+	&check_for_error($r,&scantron_remove_file('corrected'));
+	&check_for_error($r,&scantron_remove_file('skipped'));
+	&check_for_error($r,&scantron_remove_scan_data());
+	$env{'form.scantron_options_ignore'}='done';
+    }
+
+    if ($env{'form.scantron_corrections'}) {
+	&scantron_process_corrections($r);
+    }
+    $r->print("<p>Gathering necessary info.</p>");$r->rflush();
+    #get the student pick code ready
+    $r->print(&Apache::loncommon::studentbrowser_javascript());
+    my $max_bubble=&scantron_get_maxbubble();
+    my $result=&scantron_form_start($max_bubble).$default_form_data;
+    $r->print($result);
+    
+    my @validate_phases=( 'sequence',
+			  'ID',
+			  'CODE',
+			  'doublebubble',
+			  'missingbubbles');
+    if (!$env{'form.validatepass'}) {
+	$env{'form.validatepass'} = 0;
+    }
+    my $currentphase=$env{'form.validatepass'};
+
+    my $stop=0;
+    while (!$stop && $currentphase < scalar(@validate_phases)) {
+	$r->print("<p> Validating ".$validate_phases[$currentphase]."</p>");
+	$r->rflush();
+	my $which="scantron_validate_".$validate_phases[$currentphase];
+	{
+	    no strict 'refs';
+	    ($stop,$currentphase)=&$which($r,$currentphase);
+	}
+    }
+    if (!$stop) {
+	my $warning=&scantron_warning_screen('Start Grading');
+	$r->print(<<STUFF);
+Validation process complete.<br />
+$warning
+<input type="submit" name="submit" value="Start Grading" />
+<input type="hidden" name="command" value="scantron_process" />
+STUFF
+
+    } else {
+	$r->print('<input type="hidden" name="command" value="scantron_validate" />');
+	$r->print("<input type='hidden' name='validatepass' value='".$currentphase."' />");
+    }
+    if ($stop) {
+	if ($validate_phases[$currentphase] eq 'sequence') {
+	    $r->print('<input type="submit" name="submit" value="Ignore -> " />');
+	    $r->print(' this error <br />');
+
+	    $r->print(" <p>Or click the 'Grading Menu' button to start over.</p>");
+	} else {
+	    $r->print('<input type="submit" name="submit" value="Continue ->" />');
+	    $r->print(' using corrected info <br />');
+	    $r->print("<input type='submit' value='Skip' name='scantron_skip_record' />");
+	    $r->print(" this scanline saving it for later.");
+	}
+    }
+    $r->print(" </form><br />".&show_grading_menu_form($symb));
+    return '';
+}
+
+
+=pod
+
+=item scantron_remove_file
+
+   Removes the requested bubble sheet data file, makes sure that
+   scantron_original_<filename> is never removed
+
+
+=cut
+
+sub scantron_remove_file {
+    my ($which)=@_;
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $file='scantron_';
+    if ($which eq 'corrected' || $which eq 'skipped') {
+	$file.=$which.'_';
+    } else {
+	return 'refused';
+    }
+    $file.=$env{'form.scantron_selectfile'};
+    return &Apache::lonnet::removeuserfile($cname,$cdom,$file);
+}
+
+
+=pod
+
+=item scantron_remove_scan_data
+
+   Removes all scan_data correction for the requested bubble sheet
+   data file.  (In the case that both the are doing skipped records we need
+   to remember the old skipped lines for the time being so that element
+   persists for a while.)
+
+=cut
+
+sub scantron_remove_scan_data {
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my @keys=&Apache::lonnet::getkeys('nohist_scantrondata',$cdom,$cname);
+    my @todelete;
+    my $filename=$env{'form.scantron_selectfile'};
+    foreach my $key (@keys) {
+	if ($key=~/^\Q$filename\E_/) {
+	    if ($env{'form.scantron_options_redo'} eq 'redo_skipped_ready' &&
+		$key=~/remember_skipping/) {
+		next;
+	    }
+	    push(@todelete,$key);
+	}
+    }
+    my $result;
+    if (@todelete) {
+	$result=&Apache::lonnet::del('nohist_scantrondata',\@todelete,$cdom,$cname);
+    }
+    return $result;
+}
+
+
+=pod
+
+=item scantron_getfile
+
+    Fetches the requested bubble sheet data file (all 3 versions), and
+    the scan_data hash
+  
+  Arguments:
+    None
+
+  Returns:
+    2 hash references
+
+     - first one has 
+         orig      -
+         corrected -
+         skipped   -  each of which points to an array ref of the specified
+                      file broken up into individual lines
+         count     - number of scanlines
+ 
+     - second is the scan_data hash possible keys are
+       ($number refers to scanline numbered $number and thus the key affects
+        only that scanline
+        $bubline refers to the specific bubble line element and the aspects
+        refers to that specific bubble line element)
+
+       $number.user - username:domain to use
+       $number.CODE_ignore_dup 
+                    - ignore the duplicate CODE error 
+       $number.useCODE
+                    - use the CODE in the scanline as is
+       $number.no_bubble.$bubline
+                    - it is valid that there is no bubbled in bubble
+                      at $number $bubline
+       remember_skipping
+                    - a frozen hash containing keys of $number and values
+                      of either 
+                        1 - we are on a 'do skipped records pass' and plan
+                            on processing this line
+                        2 - we are on a 'do skipped records pass' and this
+                            scanline has been marked to skip yet again
+
+=cut
+
+sub scantron_getfile {
+    #FIXME really would prefer a scantron directory
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $lines;
+    $lines=&Apache::lonnet::getfile('/uploaded/'.$cdom.'/'.$cname.'/'.
+		       'scantron_orig_'.$env{'form.scantron_selectfile'});
+    my %scanlines;
+    $scanlines{'orig'}=[(split("\n",$lines,-1))];
+    my $temp=$scanlines{'orig'};
+    $scanlines{'count'}=$#$temp;
+
+    $lines=&Apache::lonnet::getfile('/uploaded/'.$cdom.'/'.$cname.'/'.
+		       'scantron_corrected_'.$env{'form.scantron_selectfile'});
+    if ($lines eq '-1') {
+	$scanlines{'corrected'}=[];
+    } else {
+	$scanlines{'corrected'}=[(split("\n",$lines,-1))];
+    }
+    $lines=&Apache::lonnet::getfile('/uploaded/'.$cdom.'/'.$cname.'/'.
+		       'scantron_skipped_'.$env{'form.scantron_selectfile'});
+    if ($lines eq '-1') {
+	$scanlines{'skipped'}=[];
+    } else {
+	$scanlines{'skipped'}=[(split("\n",$lines,-1))];
+    }
+    my @tmp=&Apache::lonnet::dump('nohist_scantrondata',$cdom,$cname);
+    if ($tmp[0] =~ /^(error:|no_such_host)/) { @tmp=(); }
+    my %scan_data = @tmp;
+    return (\%scanlines,\%scan_data);
+}
+
+=pod
+
+=item lonnet_putfile
+
+   Wrapper routine to call &Apache::lonnet::finishuserfileupload
+
+ Arguments:
+   $contents - data to store
+   $filename - filename to store $contents into
+
+ Returns:
+   result value from &Apache::lonnet::finishuserfileupload
+
+=cut
+
+sub lonnet_putfile {
+    my ($contents,$filename)=@_;
+    my $docuname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $docudom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    $env{'form.sillywaytopassafilearound'}=$contents;
+    &Apache::lonnet::finishuserfileupload($docuname,$docudom,'sillywaytopassafilearound',$filename);
+
+}
+
+=pod
+
+=item scantron_putfile
+
+    Stores the current version of the bubble sheet data files, and the
+    scan_data hash. (Does not modify the original version only the
+    corrected and skipped versions.
+
+ Arguments:
+    $scanlines - hash ref that looks like the first return value from
+                 &scantron_getfile()
+    $scan_data - hash ref that looks like the second return value from
+                 &scantron_getfile()
+
+=cut
+
+sub scantron_putfile {
+    my ($scanlines,$scan_data) = @_;
+    #FIXME really would prefer a scantron directory
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    if ($scanlines) {
+	my $prefix='scantron_';
+# no need to update orig, shouldn't change
+#   &lonnet_putfile(join("\n",@{$scanlines->{'orig'}}),$prefix.'orig_'.
+#		    $env{'form.scantron_selectfile'});
+	&lonnet_putfile(join("\n",@{$scanlines->{'corrected'}}),
+			$prefix.'corrected_'.
+			$env{'form.scantron_selectfile'});
+	&lonnet_putfile(join("\n",@{$scanlines->{'skipped'}}),
+			$prefix.'skipped_'.
+			$env{'form.scantron_selectfile'});
+    }
+    &Apache::lonnet::put('nohist_scantrondata',$scan_data,$cdom,$cname);
+}
+
+=pod
+
+=item scantron_get_line
+
+   Returns the correct version of the scanline
+
+ Arguments:
+    $scanlines - hash ref that looks like the first return value from
+                 &scantron_getfile()
+    $scan_data - hash ref that looks like the second return value from
+                 &scantron_getfile()
+    $i         - number of the requested line (starts at 0)
+
+ Returns:
+   A scanline, (either the original or the corrected one if it
+   exists), or undef if the requested scanline should be
+   skipped. (Either because it's an skipped scanline, or it's an
+   unskipped scanline and we are not doing a 'do skipped scanlines'
+   pass.
+
+=cut
+
+sub scantron_get_line {
+    my ($scanlines,$scan_data,$i)=@_;
+    if (&should_be_skipped($scanlines,$scan_data,$i)) { return undef; }
+    #if ($scanlines->{'skipped'}[$i]) { return undef; }
+    if ($scanlines->{'corrected'}[$i]) {return $scanlines->{'corrected'}[$i];}
+    return $scanlines->{'orig'}[$i]; 
+}
+
+=pod
+
+=item scantron_todo_count
+
+    Counts the number of scanlines that need processing.
+
+ Arguments:
+    $scanlines - hash ref that looks like the first return value from
+                 &scantron_getfile()
+    $scan_data - hash ref that looks like the second return value from
+                 &scantron_getfile()
+
+ Returns:
+    $count - number of scanlines to process
+
+=cut
+
+sub get_todo_count {
+    my ($scanlines,$scan_data)=@_;
+    my $count=0;
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+	if ($line=~/^[\s\cz]*$/) { next; }
+	$count++;
+    }
+    return $count;
+}
+
+=pod
+
+=item scantron_put_line
+
+    Updates the 'corrected' or 'skipped' versions of the bubble sheet
+    data file.
+
+ Arguments:
+    $scanlines - hash ref that looks like the first return value from
+                 &scantron_getfile()
+    $scan_data - hash ref that looks like the second return value from
+                 &scantron_getfile()
+    $i         - line number to update
+    $newline   - contents of the updated scanline
+    $skip      - if true make the line for skipping and update the
+                 'skipped' file
+
+=cut
+
+sub scantron_put_line {
+    my ($scanlines,$scan_data,$i,$newline,$skip)=@_;
+    if ($skip) {
+	$scanlines->{'skipped'}[$i]=$newline;
+	&start_skipping($scan_data,$i);
+	return;
+    }
+    $scanlines->{'corrected'}[$i]=$newline;
+}
+
+=pod
+
+=item scantron_clear_skip
+
+   Remove a line from the 'skipped' file
+
+ Arguments:
+    $scanlines - hash ref that looks like the first return value from
+                 &scantron_getfile()
+    $scan_data - hash ref that looks like the second return value from
+                 &scantron_getfile()
+    $i         - line number to update
+
+=cut
+
+sub scantron_clear_skip {
+    my ($scanlines,$scan_data,$i)=@_;
+    if (exists($scanlines->{'skipped'}[$i])) {
+	undef($scanlines->{'skipped'}[$i]);
+	return 1;
+    }
+    return 0;
+}
+
+=pod
+
+=item scantron_filter_not_exam
+
+   Filter routine used by &Apache::lonnavmaps::retrieveResources(), to
+   filter out resources that are not marked as 'exam' mode
+
+=cut
+
+sub scantron_filter_not_exam {
+    my ($curres)=@_;
+    
+    if (ref($curres) && $curres->is_problem() && !$curres->is_exam()) {
+	# if the user has asked to not have either hidden
+	# or 'randomout' controlled resources to be graded
+	# don't include them
+	if ($env{'form.scantron_options_hidden'} eq 'ignore_hidden'
+	    && $curres->randomout) {
+	    return 0;
+	}
+	return 1;
+    }
+    return 0;
+}
+
+=pod
+
+=item scantron_validate_sequence
+
+    Validates the selected sequence, checking for resource that are
+    not set to exam mode.
+
+=cut
+
+sub scantron_validate_sequence {
+    my ($r,$currentphase) = @_;
+
+    my $navmap=Apache::lonnavmaps::navmap->new();
+    my (undef,undef,$sequence)=
+	&Apache::lonnet::decode_symb($env{'form.selectpage'});
+
+    my $map=$navmap->getResourceByUrl($sequence);
+
+    $r->print('<input type="hidden" name="validate_sequence_exam"
+                                    value="ignore" />');
+    if ($env{'form.validate_sequence_exam'} ne 'ignore') {
+	my @resources=
+	    $navmap->retrieveResources($map,\&scantron_filter_not_exam,1,0);
+	if (@resources) {
+	    $r->print("<p>".&mt('Some resources in the sequence currently are not set to exam mode. Grading these resources currently may not work correctly.')."</p>");
+	    return (1,$currentphase);
+	}
+    }
+
+    return (0,$currentphase+1);
+}
+
+=pod
+
+=item scantron_validate_ID
+
+   Validates all scanlines in the selected file to not have any
+   invalid or underspecified student IDs
+
+=cut
+
+sub scantron_validate_ID {
+    my ($r,$currentphase) = @_;
+    
+    #get student info
+    my $classlist=&Apache::loncoursedata::get_classlist();
+    my %idmap=&username_to_idmap($classlist);
+
+    #get scantron line setup
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my ($scanlines,$scan_data)=&scantron_getfile();
+
+    my %found=('ids'=>{},'usernames'=>{});
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+	if ($line=~/^[\s\cz]*$/) { next; }
+	my $scan_record=&scantron_parse_scanline($line,$i,\%scantron_config,
+						 $scan_data);
+	my $id=$$scan_record{'scantron.ID'};
+	my $found;
+	foreach my $checkid (keys(%idmap)) {
+	    if (lc($checkid) eq lc($id)) { $found=$checkid;last; }
+	}
+	if ($found) {
+	    my $username=$idmap{$found};
+	    if ($found{'ids'}{$found}) {
+		&scantron_get_correction($r,$i,$scan_record,\%scantron_config,
+					 $line,'duplicateID',$found);
+		return(1,$currentphase);
+	    } elsif ($found{'usernames'}{$username}) {
+		&scantron_get_correction($r,$i,$scan_record,\%scantron_config,
+					 $line,'duplicateID',$username);
+		return(1,$currentphase);
+	    }
+	    #FIXME store away line we previously saw the ID on to use above
+	    $found{'ids'}{$found}++;
+	    $found{'usernames'}{$username}++;
+	} else {
+	    if ($id =~ /^\s*$/) {
+		my $username=&scan_data($scan_data,"$i.user");
+		if (defined($username) && $found{'usernames'}{$username}) {
+		    &scantron_get_correction($r,$i,$scan_record,
+					     \%scantron_config,
+					     $line,'duplicateID',$username);
+		    return(1,$currentphase);
+		} elsif (!defined($username)) {
+		    &scantron_get_correction($r,$i,$scan_record,
+					     \%scantron_config,
+					     $line,'incorrectID');
+		    return(1,$currentphase);
+		}
+		$found{'usernames'}{$username}++;
+	    } else {
+		&scantron_get_correction($r,$i,$scan_record,\%scantron_config,
+					 $line,'incorrectID');
+		return(1,$currentphase);
+	    }
+	}
+    }
+
+    return (0,$currentphase+1);
+}
+
+=pod
+
+=item scantron_get_correction
+
+   Builds the interface screen to interact with the operator to fix a
+   specific error condition in a specific scanline
+
+ Arguments:
+    $r           - Apache request object
+    $i           - number of the current scanline
+    $scan_record - hash ref as returned from &scantron_parse_scanline()
+    $scan_config - hash ref as returned from &get_scantron_config()
+    $line        - full contents of the current scanline
+    $error       - error condition, valid values are
+                   'incorrectCODE', 'duplicateCODE',
+                   'doublebubble', 'missingbubble',
+                   'duplicateID', 'incorrectID'
+    $arg         - extra information needed
+       For errors:
+         - duplicateID   - paper number that this studentID was seen before on
+         - duplicateCODE - array ref of the paper numbers this CODE was
+                           seen on before
+         - incorrectCODE - current incorrect CODE 
+         - doublebubble  - array ref of the bubble lines that have double
+                           bubble errors
+         - missingbubble - array ref of the bubble lines that have missing
+                           bubble errors
+
+=cut
+
+sub scantron_get_correction {
+    my ($r,$i,$scan_record,$scan_config,$line,$error,$arg)=@_;
+
+#FIXME in the case of a duplicated ID the previous line, probaly need
+#to show both the current line and the previous one and allow skipping
+#the previous one or the current one
+
+    $r->print("<p><b>An error was detected ($error)</b>");
+    if ( $$scan_record{'scantron.PaperID'} =~ /\S/) {
+	$r->print(" for PaperID <tt>".
+		  $$scan_record{'scantron.PaperID'}."</tt> \n");
+    } else {
+	$r->print(" in scanline $i <pre>".
+		  $line."</pre> \n");
+    }
+    my $message="<p>The ID on the form is  <tt>".
+	$$scan_record{'scantron.ID'}."</tt><br />\n".
+	"The name on the paper is ".
+	$$scan_record{'scantron.LastName'}.",".
+	$$scan_record{'scantron.FirstName'}."</p>";
+
+    $r->print('<input type="hidden" name="scantron_corrections" value="'.$error.'" />'."\n");
+    $r->print('<input type="hidden" name="scantron_line" value="'.$i.'" />'."\n");
+    if ($error =~ /ID$/) {
+	if ($error eq 'incorrectID') {
+	    $r->print("The encoded ID is not in the classlist</p>\n");
+	} elsif ($error eq 'duplicateID') {
+	    $r->print("The encoded ID has also been used by a previous paper $arg</p>\n");
+	}
+	$r->print($message);
+	$r->print("<p>How should I handle this? <br /> \n");
+	$r->print("\n<ul><li> ");
+	#FIXME it would be nice if this sent back the user ID and
+	#could do partial userID matches
+	$r->print(&Apache::loncommon::selectstudent_link('scantronupload',
+				       'scantron_username','scantron_domain'));
+	$r->print(": <input type='text' name='scantron_username' value='' />");
+	$r->print("\n@".
+		 &Apache::loncommon::select_dom_form($env{'request.role.domain'},'scantron_domain'));
+
+	$r->print('</li>');
+    } elsif ($error =~ /CODE$/) {
+	if ($error eq 'incorrectCODE') {
+	    $r->print("</p><p>The encoded CODE is not in the list of possible CODEs</p>\n");
+	} elsif ($error eq 'duplicateCODE') {
+	    $r->print("</p><p>The encoded CODE has also been used by a previous paper ".join(', ',@{$arg}).", and CODEs are supposed to be unique</p>\n");
+	}
+	$r->print("<p>The CODE on the form is  <tt>'".
+		  $$scan_record{'scantron.CODE'}."'</tt><br />\n");
+	$r->print($message);
+	$r->print("<p>How should I handle this? <br /> \n");
+	$r->print("\n<br /> ");
+	my $i=0;
+	if ($error eq 'incorrectCODE' 
+	    && $$scan_record{'scantron.CODE'}=~/\S/ ) {
+	    my ($max,$closest)=&scantron_get_closely_matching_CODEs($arg,$$scan_record{'scantron.CODE'});
+	    if ($closest > 0) {
+		foreach my $testcode (@{$closest}) {
+		    my $checked='';
+		    if (!$i) { $checked=' checked="checked" '; }
+		    $r->print("<label><input type='radio' name='scantron_CODE_resolution' value='use_closest_$i' $checked /> Use the similar CODE <b><tt>".$testcode."</tt></b> instead.</label><input type='hidden' name='scantron_CODE_closest_$i' value='$testcode' />");
+		    $r->print("\n<br />");
+		    $i++;
+		}
+	    }
+	}
+	if ($$scan_record{'scantron.CODE'}=~/\S/ ) {
+	    my $checked; if (!$i) { $checked=' checked="checked" '; }
+	    $r->print("<label><input type='radio' name='scantron_CODE_resolution' value='use_unfound' $checked /> Use the CODE <b><tt>".$$scan_record{'scantron.CODE'}."</tt></b> that is was on the paper, ignoring the error.</label>");
+	    $r->print("\n<br />");
+	}
+
+	$r->print(<<ENDSCRIPT);
+<script type="text/javascript">
+function change_radio(field) {
+    var slct=document.scantronupload.scantron_CODE_resolution;
+    var i;
+    for (i=0;i<slct.length;i++) {
+        if (slct[i].value==field) { slct[i].checked=true; }
+    }
+}
+</script>
+ENDSCRIPT
+	my $href="/adm/pickcode?".
+	   "form=".&escape("scantronupload").
+	   "&scantron_format=".&escape($env{'form.scantron_format'}).
+	   "&scantron_CODElist=".&escape($env{'form.scantron_CODElist'}).
+	   "&curCODE=".&escape($$scan_record{'scantron.CODE'}).
+	   "&scantron_selectfile=".&escape($env{'form.scantron_selectfile'});
+	if ($env{'form.scantron_CODElist'} =~ /\S/) { 
+	    $r->print("<label><input type='radio' name='scantron_CODE_resolution' value='use_found' /> <a target='_blank' href='$href'>Select</a> a CODE from the list of all CODEs and use it.</label> Selected CODE is <input readonly='true' type='text' size='8' name='scantron_CODE_selectedvalue' onfocus=\"javascript:change_radio('use_found')\" onchange=\"javascript:change_radio('use_found')\" />");
+	    $r->print("\n<br />");
+	}
+	$r->print("<label><input type='radio' name='scantron_CODE_resolution' value='use_typed' /> Use </label><input type='text' size='8' name='scantron_CODE_newvalue' onfocus=\"javascript:change_radio('use_typed')\" onkeypress=\"javascript:change_radio('use_typed')\" /> as the CODE.");
+	$r->print("\n<br /><br />");
+    } elsif ($error eq 'doublebubble') {
+	$r->print("<p>There have been multiple bubbles scanned for a some question(s)</p>\n");
+	$r->print('<input type="hidden" name="scantron_questions" value="'.
+		  join(',',@{$arg}).'" />');
+	$r->print($message);
+	$r->print("<p>Please indicate which bubble should be used for grading</p>");
+	foreach my $question (@{$arg}) {
+	    my $selected=$$scan_record{"scantron.$question.answer"};
+	    &scantron_bubble_selector($r,$scan_config,$question,
+				      split('',$selected));
+	}
+    } elsif ($error eq 'missingbubble') {
+	$r->print("<p>There have been <b>no</b> bubbles scanned for some question(s)</p>\n");
+	$r->print($message);
+	$r->print("<p>Please indicate which bubble should be used for grading</p>");
+	$r->print("Some questions have no scanned bubbles\n");
+	$r->print('<input type="hidden" name="scantron_questions" value="'.
+		  join(',',@{$arg}).'" />');
+	foreach my $question (@{$arg}) {
+	    my $selected=$$scan_record{"scantron.$question.answer"};
+	    &scantron_bubble_selector($r,$scan_config,$question);
+	}
+    } else {
+	$r->print("\n<ul>");
+    }
+    $r->print("\n</li></ul>");
+
+}
+
+=pod
+
+=item scantron_bubble_selector
+  
+   Generates the html radiobuttons to correct a single bubble line
+   possibly showing the existing the selected bubbles if known
+
+ Arguments:
+    $r           - Apache request object
+    $scan_config - hash from &get_scantron_config()
+    $quest       - number of the bubble line to make a corrector for
+    $selected    - array of letters of previously selected bubbles
+    $lines       - if present, number of bubble lines to show
+
+=cut
+
+sub scantron_bubble_selector {
+    my ($r,$scan_config,$quest,@selected, $lines)=@_;
+    my $max=$$scan_config{'Qlength'};
+
+    my $scmode=$$scan_config{'Qon'};
+    if ($scmode eq 'number' || $scmode eq 'letter') { $max=10; }	     
+
+
+    if (!defined($lines)) {
+	$lines = 1;
+    }
+    my $total_lines = $lines*2;
+    my @alphabet=('A'..'Z');
+    $r->print("<table border='1'><tr><td rowspan='".$total_lines."'>$quest</td>");
+
+    for (my $l = 0; $l < $lines; $l++) {
+	if ($l != 0) {
+	    $r->print('<tr>');
+	}
+
+	# FIXME:  This loop probably has to be considerably more clever for
+	#  multiline bubbles: User can multibubble by having bubbles in
+	#  several lines.  User can skip lines legitimately etc. etc.
+
+	for (my $i=0;$i<$max;$i++) {
+	    $r->print("\n".'<td align="center">');
+	    if ($selected[0] eq $alphabet[$i]) { 
+		$r->print('X'); 
+		shift(@selected) ;
+	    } else { 
+		$r->print('&nbsp;'); 
+	    }
+	    $r->print('</td>');
+	    
+	}
+
+	if ($l == 0) {
+	    my $lspan = $total_lines * 2;   #  2 table rows per bubble line.
+
+	    $r->print('<td rowspan='.$lspan.'><label><input type="radio" name="scantron_correct_Q_'.
+	      $quest.'" value="none" /> No bubble </label></td>');
+	
+	}
+
+	$r->print('</tr><tr>');
+
+	# FIXME: This may have to be a bit more clever for
+	#        multiline questions (different values e.g..).
+
+	for (my $i=0;$i<$max;$i++) {
+	    $r->print("\n".
+		      '<td><label><input type="radio" name="scantron_correct_Q_'.
+		      $quest.'" value="'.$i.'" />'.$alphabet[$i]."</label></td>");
+	}
+	$r->print('</tr>');
+
+	    
+    }
+    $r->print('</table>');
+}
+
+=pod
+
+=item num_matches
+
+   Counts the number of characters that are the same between the two arguments.
+
+ Arguments:
+   $orig - CODE from the scanline
+   $code - CODE to match against
+
+ Returns:
+   $count - integer count of the number of same characters between the
+            two arguments
+
+=cut
+
+sub num_matches {
+    my ($orig,$code) = @_;
+    my @code=split(//,$code);
+    my @orig=split(//,$orig);
+    my $same=0;
+    for (my $i=0;$i<scalar(@code);$i++) {
+	if ($code[$i] eq $orig[$i]) { $same++; }
+    }
+    return $same;
+}
+
+=pod
+
+=item scantron_get_closely_matching_CODEs
+
+   Cycles through all CODEs and finds the set that has the greatest
+   number of same characters as the provided CODE
+
+ Arguments:
+   $allcodes - hash ref returned by &get_codes()
+   $CODE     - CODE from the current scanline
+
+ Returns:
+   2 element list
+    - first elements is number of how closely matching the best fit is 
+      (5 means best set has 5 matching characters)
+    - second element is an arrary ref containing the set of valid CODEs
+      that best fit the passed in CODE
+
+=cut
+
+sub scantron_get_closely_matching_CODEs {
+    my ($allcodes,$CODE)=@_;
+    my @CODEs;
+    foreach my $testcode (sort(keys(%{$allcodes}))) {
+	push(@{$CODEs[&num_matches($CODE,$testcode)]},$testcode);
+    }
+
+    return ($#CODEs,$CODEs[-1]);
+}
+
+=pod
+
+=item get_codes
+
+   Builds a hash which has keys of all of the valid CODEs from the selected
+   set of remembered CODEs.
+
+ Arguments:
+  $old_name - name of the set of remembered CODEs
+  $cdom     - domain of the course
+  $cnum     - internal course name
+
+ Returns:
+  %allcodes - keys are the valid CODEs, values are all 1
+
+=cut
+
+sub get_codes {
+    my ($old_name, $cdom, $cnum) = @_;
+    if (!$old_name) {
+	$old_name=$env{'form.scantron_CODElist'};
+    }
+    if (!$cdom) {
+	$cdom =$env{'course.'.$env{'request.course.id'}.'.domain'};
+    }
+    if (!$cnum) {
+	$cnum =$env{'course.'.$env{'request.course.id'}.'.num'};
+    }
+    my %result=&Apache::lonnet::get('CODEs',[$old_name,"type\0$old_name"],
+				    $cdom,$cnum);
+    my %allcodes;
+    if ($result{"type\0$old_name"} eq 'number') {
+	%allcodes=map {($_,1)} split(',',$result{$old_name});
+    } else {
+	%allcodes=map {(&Apache::lonprintout::num_to_letters($_),1)} split(',',$result{$old_name});
+    }
+    return %allcodes;
+}
+
+=pod
+
+=item scantron_validate_CODE
+
+   Validates all scanlines in the selected file to not have any
+   invalid or underspecified CODEs and that none of the codes are
+   duplicated if this was requested.
+
+=cut
+
+sub scantron_validate_CODE {
+    my ($r,$currentphase) = @_;
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    if ($scantron_config{'CODElocation'} &&
+	$scantron_config{'CODEstart'} &&
+	$scantron_config{'CODElength'}) {
+	if (!defined($env{'form.scantron_CODElist'})) {
+	    &FIXME_blow_up()
+	}
+    } else {
+	return (0,$currentphase+1);
+    }
+    
+    my %usedCODEs;
+
+    my %allcodes=&get_codes();
+
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+	if ($line=~/^[\s\cz]*$/) { next; }
+	my $scan_record=&scantron_parse_scanline($line,$i,\%scantron_config,
+						 $scan_data);
+	my $CODE=$$scan_record{'scantron.CODE'};
+	my $error=0;
+	if (!&Apache::lonnet::validCODE($CODE)) {
+	    &scantron_get_correction($r,$i,$scan_record,
+				     \%scantron_config,
+				     $line,'incorrectCODE',\%allcodes);
+	    return(1,$currentphase);
+	}
+	if (%allcodes && !exists($allcodes{$CODE}) 
+	    && !$$scan_record{'scantron.useCODE'}) {
+	    &scantron_get_correction($r,$i,$scan_record,
+				     \%scantron_config,
+				     $line,'incorrectCODE',\%allcodes);
+	    return(1,$currentphase);
+	}
+	if (exists($usedCODEs{$CODE}) 
+	    && $env{'form.scantron_CODEunique'} eq 'yes'
+	    && !$$scan_record{'scantron.CODE_ignore_dup'}) {
+	    &scantron_get_correction($r,$i,$scan_record,
+				     \%scantron_config,
+				     $line,'duplicateCODE',$usedCODEs{$CODE});
+	    return(1,$currentphase);
+	}
+	push (@{$usedCODEs{$CODE}},$$scan_record{'scantron.PaperID'});
+    }
+    return (0,$currentphase+1);
+}
+
+=pod
+
+=item scantron_validate_doublebubble
+
+   Validates all scanlines in the selected file to not have any
+   bubble lines with multiple bubbles marked.
+
+=cut
+
+sub scantron_validate_doublebubble {
+    my ($r,$currentphase) = @_;
+    #get student info
+    my $classlist=&Apache::loncoursedata::get_classlist();
+    my %idmap=&username_to_idmap($classlist);
+
+    #get scantron line setup
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+	if ($line=~/^[\s\cz]*$/) { next; }
+	my $scan_record=&scantron_parse_scanline($line,$i,\%scantron_config,
+						 $scan_data);
+	if (!defined($$scan_record{'scantron.doubleerror'})) { next; }
+	&scantron_get_correction($r,$i,$scan_record,\%scantron_config,$line,
+				 'doublebubble',
+				 $$scan_record{'scantron.doubleerror'});
+    	return (1,$currentphase);
+    }
+    return (0,$currentphase+1);
+}
+
+=pod
+
+=item scantron_get_maxbubble
+
+   Returns the maximum number of bubble lines that are expected to
+   occur. Does this by walking the selected sequence rendering the
+   resource and then checking &Apache::lonxml::get_problem_counter()
+   for what the current value of the problem counter is.
+
+   Caches the result to $env{'form.scantron_maxbubble'}
+
+=cut
+
+sub scantron_get_maxbubble {    
+
+    if (defined($env{'form.scantron_maxbubble'}) &&
+	$env{'form.scantron_maxbubble'}) {
+	return $env{'form.scantron_maxbubble'};
+    }
+
+    my $navmap=Apache::lonnavmaps::navmap->new();
+    my (undef,undef,$sequence)=
+	&Apache::lonnet::decode_symb($env{'form.selectpage'});
+
+    my $map=$navmap->getResourceByUrl($sequence);
+    my @resources=$navmap->retrieveResources($map,\&scantron_filter,1,0);
+
+    &Apache::lonxml::clear_problem_counter();
+
+    my $uname       = $env{'form.student'};
+    my $udom        = $env{'form.userdom'};
+    my $cid         = $env{'request.course.id'};
+    my $total_lines = 0;
+    %bubble_lines_per_response = ();
+
+    foreach my $resource (@resources) {
+	my $symb = $resource->symb();
+	my $result=&Apache::lonnet::ssi($resource->src(),
+					('symb' => $resource->symb()),
+					('grade_target' => 'analyze'),
+					('grade_courseid' => $cid),
+					('grade_domain' => $udom),
+					('grade_username' => $uname));
+	my (undef, $an) =
+	    split(/_HASH_REF__/,$result, 2);
+
+	my %analysis = &Apache::lonnet::str2hash($an);
+
+
+
+	foreach my $part_id (@{$analysis{'parts'}}) {
+	    my $bubble_lines = $analysis{"$part_id.bubble_lines"}[0];
+	    if (!$bubble_lines) {
+		$bubble_lines = 1;
+	    }
+	    $bubble_lines_per_response{"$symb.$part_id"} = $bubble_lines;
+	    $total_lines = $total_lines + $bubble_lines;
+	}
+
+    }
+    &Apache::lonnet::delenv('scantron\.');
+    $env{'form.scantron_maxbubble'} =
+	$total_lines;
+    return $env{'form.scantron_maxbubble'};
+}
+
+=pod
+
+=item scantron_validate_missingbubbles
+
+   Validates all scanlines in the selected file to not have any
+   bubble lines with missing bubbles that haven't been verified as missing.
+
+=cut
+
+sub scantron_validate_missingbubbles {
+    my ($r,$currentphase) = @_;
+    #get student info
+    my $classlist=&Apache::loncoursedata::get_classlist();
+    my %idmap=&username_to_idmap($classlist);
+
+    #get scantron line setup
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my ($scanlines,$scan_data)=&scantron_getfile();
+    my $max_bubble=&scantron_get_maxbubble();
+    if (!$max_bubble) { $max_bubble=2**31; }
+    for (my $i=0;$i<=$scanlines->{'count'};$i++) {
+	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+	if ($line=~/^[\s\cz]*$/) { next; }
+	my $scan_record=&scantron_parse_scanline($line,$i,\%scantron_config,
+						 $scan_data);
+	if (!defined($$scan_record{'scantron.missingerror'})) { next; }
+	my @to_correct;
+	foreach my $missing (@{$$scan_record{'scantron.missingerror'}}) {
+	    if ($missing > $max_bubble) { next; }
+	    push(@to_correct,$missing);
+	}
+	if (@to_correct) {
+	    &scantron_get_correction($r,$i,$scan_record,\%scantron_config,
+				     $line,'missingbubble',\@to_correct);
+	    return (1,$currentphase);
+	}
+
+    }
+    return (0,$currentphase+1);
+}
+
+=pod
+
+=item scantron_process_students
+
+   Routine that does the actual grading of the bubble sheet information.
+
+   The parsed scanline hash is added to %env 
+
+   Then foreach unskipped scanline it does an &Apache::lonnet::ssi()
+   foreach resource , with the form data of
+
+	'submitted'     =>'scantron' 
+	'grade_target'  =>'grade',
+	'grade_username'=> username of student
+	'grade_domain'  => domain of student
+	'grade_courseid'=> of course
+	'grade_symb'    => symb of resource to grade
+
+    This triggers a grading pass. The problem grading code takes care
+    of converting the bubbled letter information (now in %env) into a
+    valid submission.
+
+=cut
+
 sub scantron_process_students {
     my ($r) = @_;
-    my (undef,undef,$sequence)=split(/___/,$ENV{'form.selectpage'});
-    my ($symb,$url)=&get_symb_and_url($r);
+    my (undef,undef,$sequence)=&Apache::lonnet::decode_symb($env{'form.selectpage'});
+    my ($symb)=&get_symb($r);
     if (!$symb) {return '';}
-    my $default_form_data=&defaultFormData($symb,$url);
+    my $default_form_data=&defaultFormData($symb);
 
-    my %scantron_config=&get_scantron_config($ENV{'form.scantron_format'});
-    my $scanlines=Apache::File->new($Apache::lonnet::perlvar{'lonScansDir'}."/$ENV{'form.scantron_selectfile'}");
-    my @scanlines=<$scanlines>;
+    my %scantron_config=&get_scantron_config($env{'form.scantron_format'});
+    my ($scanlines,$scan_data)=&scantron_getfile();
     my $classlist=&Apache::loncoursedata::get_classlist();
     my %idmap=&username_to_idmap($classlist);
-    my $navmap=Apache::lonnavmaps::navmap->new(1, 1);
+    my $navmap=Apache::lonnavmaps::navmap->new();
     my $map=$navmap->getResourceByUrl($sequence);
     my @resources=$navmap->retrieveResources($map,\&scantron_filter,1,0);
-    $r->print("geto ".scalar(@resources)."<br />");
+#    $r->print("geto ".scalar(@resources)."<br />");
     my $result= <<SCANTRONFORM;
 <form method="post" enctype="multipart/form-data" action="/adm/grades" name="scantronupload">
   <input type="hidden" name="command" value="scantron_configphase" />
@@ -3341,102 +6658,275 @@ SCANTRONFORM
     $r->print($result);
 
     my @delayqueue;
-    my $totalcorrect;
-    my $totalincorrect;
+    my %completedstudents;
+    
+    my $count=&get_todo_count($scanlines,$scan_data);
+    my %prog_state=&Apache::lonhtmlcommon::Create_PrgWin($r,'Scantron Status',
+ 				    'Scantron Progress',$count,
+				    'inline',undef,'scantronupload');
+    &Apache::lonhtmlcommon::Update_PrgWin($r,\%prog_state,
+					  'Processing first student');
+    my $start=&Time::HiRes::time();
+    my $i=-1;
+    my ($uname,$udom,$started);
+    while ($i<$scanlines->{'count'}) {
+ 	($uname,$udom)=('','');
+ 	$i++;
+ 	my $line=&scantron_get_line($scanlines,$scan_data,$i);
+ 	if ($line=~/^[\s\cz]*$/) { next; }
+	if ($started) {
+	    &Apache::lonhtmlcommon::Increment_PrgWin($r,\%prog_state,
+						     'last student');
+	}
+	$started=1;
+ 	my $scan_record=&scantron_parse_scanline($line,$i,\%scantron_config,
+ 						 $scan_data);
+ 	unless ($uname=&scantron_find_student($scan_record,$scan_data,
+ 					      \%idmap,$i)) {
+  	    &scantron_add_delay(\@delayqueue,$line,
+ 				'Unable to find a student that matches',1);
+ 	    next;
+  	}
+ 	if (exists $completedstudents{$uname}) {
+ 	    &scantron_add_delay(\@delayqueue,$line,
+ 				'Student '.$uname.' has multiple sheets',2);
+ 	    next;
+ 	}
+  	($uname,$udom)=split(/:/,$uname);
 
-    my %prog_state=&Apache::lonhtmlcommon::Create_PrgWin($r,
-	           'Scantron Status','Scantron Progress',scalar(@scanlines));
-    foreach my $line (@scanlines) {
-	my $studentcorrect;
-	my $studentincorrect;
+	&Apache::lonxml::clear_problem_counter();
+  	&Apache::lonnet::appenv(%$scan_record);
 
-	chomp($line);
-	my $scan_record=&scantron_parse_scanline($line,\%scantron_config);
-	my ($uname,$udom);
-	if ($uname=&scantron_find_student($scan_record,\%idmap)) {
-	    &scantron_add_delay(\@delayqueue,$line,
-				'Unable to find a student that matches');
-	}
-	$r->print('<pre>doing studnet'.$uname.'</pre>');
-	($uname,$udom)=split(/:/,$uname);
-	&Apache::lonnet::delenv('form.counter');
-	&Apache::lonnet::appenv(%$scan_record);
-#    &Apache::lonhomework::showhash(%ENV);
-    $Apache::lonxml::debug=1;
-	&Apache::lonxml::debug("line is $line");
+	if (&scantron_clear_skip($scanlines,$scan_data,$i)) {
+	    &scantron_putfile($scanlines,$scan_data);
+	}
 	
-	    my $i=0;
+	my $i=0;
 	foreach my $resource (@resources) {
 	    $i++;
-	    my $result=&Apache::lonnet::ssi($resource->src(),
-				 ('submitted'     =>'scantron',
-				  'grade_target'  =>'grade',
-				  'grade_username'=>$uname,
-				  'grade_domain'  =>$udom,
-				  'grade_courseid'=>$ENV{'request.course.id'},
-				  'grade_symb'    =>$resource->symb()));
-	    my %score=&Apache::lonnet::restore($resource->symb(),
-					       $ENV{'request.course.id'},
-					       $udom,$uname);
-	    foreach my $part ($resource->{PARTS}) {
-		if ($score{'resource.'.$part.'.solved'} =~ /^correct/) {
-		    $studentcorrect++;
-		    $totalcorrect++;
-		} else {
-		    $studentincorrect++;
-		    $totalincorrect++;
-		}
+	    my %form=('submitted'     =>'scantron',
+		      'grade_target'  =>'grade',
+		      'grade_username'=>$uname,
+		      'grade_domain'  =>$udom,
+		      'grade_courseid'=>$env{'request.course.id'},
+		      'grade_symb'    =>$resource->symb());
+	    if (exists($scan_record->{'scantron.CODE'})
+		&& 
+		&Apache::lonnet::validCODE($scan_record->{'scantron.CODE'})) {
+		$form{'CODE'}=$scan_record->{'scantron.CODE'};
+	    } else {
+		$form{'CODE'}='';
 	    }
-	    $r->print('<pre>'.
-		      $resource->symb().'-'.
-		      $resource->src().'-'.'</pre>result is'.$result);
-	    &Apache::lonhomework::showhash(%score);
-	#    if ($i eq 3) {last;}
-	}
-	&Apache::lonnet::delenv('form.counter');
+	    my $result=&Apache::lonnet::ssi($resource->src(),%form);
+	    if ($result ne '') {
+		&Apache::lonnet::logthis("scantron grading error -> $result");
+		&Apache::lonnet::logthis("scantron grading error info name $uname domain $udom course $env{'request.course.id'} url ".$resource->src());
+	    }
+	    if (&Apache::loncommon::connection_aborted($r)) { last; }
+	}
+	$completedstudents{$uname}={'line'=>$line};
+	if (&Apache::loncommon::connection_aborted($r)) { last; }
+    } continue {
+	&Apache::lonxml::clear_problem_counter();
 	&Apache::lonnet::delenv('scantron\.');
-	&Apache::lonhtmlcommon::Increment_PrgWin($r,\%prog_state,
-             'last student Who got a '.$studentcorrect.' correct and '.
-	     $studentincorrect.' incorrect. The class has gotten '.
-             $totalcorrect.' correct and '.$totalincorrect.' incorrect');
-	last;
-	#FIXME
-	#get iterator for $sequence
-	#foreach question 'submit' the students answer to the server
-	#   through grade target {
-	#   generate data to pass back that includes grade recevied
-	#}
-    }
-    $Apache::lonxml::debug=0;
-    foreach my $delay (@delayqueue) {
-	#FIXME
-	#print out each delayed student with interface to select how
-	#  to repair student provided info
-	#Expected errors include
-	#  1 bad/no stuid/username
-	#  2 invalid bubblings
-	
     }
+    &Apache::lonhtmlcommon::Close_PrgWin($r,\%prog_state);
+#    my $lasttime = &Time::HiRes::time()-$start;
+#    $r->print("<p>took $lasttime</p>");
+
+    $r->print("</form>");
+    $r->print(&show_grading_menu_form($symb));
+    return '';
+}
+
+=pod
+
+=item scantron_upload_scantron_data
+
+    Creates the screen for adding a new bubble sheet data file to a course.
+
+=cut
+
+sub scantron_upload_scantron_data {
+    my ($r)=@_;
+    $r->print(&Apache::loncommon::coursebrowser_javascript($env{'request.role.domain'}));
+    my $select_link=&Apache::loncommon::selectcourse_link('rules','courseid',
+							  'domainid',
+							  'coursename');
+    my $domsel=&Apache::loncommon::select_dom_form($env{'request.role.domain'},
+						   'domainid');
+    my $default_form_data=&defaultFormData(&get_symb($r,1));
+    $r->print(<<UPLOAD);
+<script type="text/javascript" language="javascript">
+    function checkUpload(formname) {
+	if (formname.upfile.value == "") {
+	    alert("Please use the browse button to select a file from your local directory.");
+	    return false;
+	}
+	formname.submit();
+    }
+</script>
+
+<form enctype='multipart/form-data' action='/adm/grades' name='rules' method='post'>
+$default_form_data
+<table>
+<tr><td>$select_link </td></tr>
+<tr><td>Course ID:   </td><td><input name='courseid' type='text' />  </td></tr>
+<tr><td>Course Name: </td><td><input name='coursename' type='text' /></td></tr>
+<tr><td>Domain:      </td><td>$domsel                                </td></tr>
+<tr><td>File to upload:</td><td><input type="file" name="upfile" size="50" /></td></tr>
+</table>
+<input name='command' value='scantronupload_save' type='hidden' />
+<input type="button" onClick="javascript:checkUpload(this.form);" value="Upload Scantron Data" />
+</form>
+UPLOAD
+    return '';
+}
+
+=pod
+
+=item scantron_upload_scantron_data_save
+
+   Adds a provided bubble information data file to the course if user
+   has the correct privileges to do so.  
+
+=cut
+
+sub scantron_upload_scantron_data_save {
+    my($r)=@_;
+    my ($symb)=&get_symb($r,1);
+    my $doanotherupload=
+	'<br /><form action="/adm/grades" method="post">'."\n".
+	'<input type="hidden" name="command" value="scantronupload" />'."\n".
+	'<input type="submit" name="submit" value="Do Another Upload" />'."\n".
+	'</form>'."\n";
+    if (!&Apache::lonnet::allowed('usc',$env{'form.domainid'}) &&
+	!&Apache::lonnet::allowed('usc',
+			    $env{'form.domainid'}.'_'.$env{'form.courseid'})) {
+	$r->print("You are not allowed to upload Scantron data to the requested course.<br />");
+	if ($symb) {
+	    $r->print(&show_grading_menu_form($symb));
+	} else {
+	    $r->print($doanotherupload);
+	}
+	return '';
+    }
+    my %coursedata=&Apache::lonnet::coursedescription($env{'form.domainid'}.'_'.$env{'form.courseid'});
+    $r->print("Doing upload to ".$coursedata{'description'}." <br />");
+    my $fname=$env{'form.upfile.filename'};
     #FIXME
-    # if delay queue exists 2 submits one to process delayed students one
-    #     to ignore delayed students, possibly saving the delay queue for later
-    
-    $navmap->untieHashes();
+    #copied from lonnet::userfileupload()
+    #make that function able to target a specified course
+    # Replace Windows backslashes by forward slashes
+    $fname=~s/\\/\//g;
+    # Get rid of everything but the actual filename
+    $fname=~s/^.*\/([^\/]+)$/$1/;
+    # Replace spaces by underscores
+    $fname=~s/\s+/\_/g;
+    # Replace all other weird characters by nothing
+    $fname=~s/[^\w\.\-]//g;
+    # See if there is anything left
+    unless ($fname) { return 'error: no uploaded file'; }
+    my $uploadedfile=$fname;
+    $fname='scantron_orig_'.$fname;
+    if (length($env{'form.upfile'}) < 2) {
+	$r->print("<span class=\"LC_error\">Error:</span> The file you attempted to upload, <tt>".&HTML::Entities::encode($env{'form.upfile.filename'},'<>&"')."</tt>, contained no information. Please check that you entered the correct filename.");
+    } else {
+	my $result=&Apache::lonnet::finishuserfileupload($env{'form.courseid'},$env{'form.domainid'},'upfile',$fname);
+	if ($result =~ m|^/uploaded/|) {
+	    $r->print("<span class=\"LC_success\">Success:</span> Successfully uploaded ".(length($env{'form.upfile'})-1)." bytes of data into location <tt>".$result."</tt>");
+	} else {
+	    $r->print("<span class=\"LC_error\">Error:</span> An error (".$result.") occurred when attempting to upload the file, <tt>".&HTML::Entities::encode($env{'form.upfile.filename'},'<>&"')."</tt>");
+	}
+    }
+    if ($symb) {
+	$r->print(&scantron_selectphase($r,$uploadedfile));
+    } else {
+	$r->print($doanotherupload);
+    }
+    return '';
+}
+
+=pod
+
+=item valid_file
+
+   Validates that the requested bubble data file exists in the course.
+
+=cut
+
+sub valid_file {
+    my ($requested_file)=@_;
+    foreach my $filename (sort(&scantron_filenames())) {
+	if ($requested_file eq $filename) { return 1; }
+    }
+    return 0;
 }
+
+=pod
+
+=item scantron_download_scantron_data
+
+   Shows a list of the three internal files (original, corrected,
+   skipped) for a specific bubble sheet data file that exists in the
+   course.
+
+=cut
+
+sub scantron_download_scantron_data {
+    my ($r)=@_;
+    my $default_form_data=&defaultFormData(&get_symb($r,1));
+    my $cname=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my $file=$env{'form.scantron_selectfile'};
+    if (! &valid_file($file)) {
+	$r->print(<<ERROR);
+	<p>
+	    The requested file name was invalid.
+        </p>
+ERROR
+	$r->print(&show_grading_menu_form(&get_symb($r,1)));
+	return;
+    }
+    my $orig='/uploaded/'.$cdom.'/'.$cname.'/scantron_orig_'.$file;
+    my $corrected='/uploaded/'.$cdom.'/'.$cname.'/scantron_corrected_'.$file;
+    my $skipped='/uploaded/'.$cdom.'/'.$cname.'/scantron_skipped_'.$file;
+    &Apache::lonnet::allowuploaded('/adm/grades',$orig);
+    &Apache::lonnet::allowuploaded('/adm/grades',$corrected);
+    &Apache::lonnet::allowuploaded('/adm/grades',$skipped);
+    $r->print(<<DOWNLOAD);
+    <p>
+	<a href="$orig">Original</a> file as uploaded by the scantron office.
+    </p>
+    <p>
+	<a href="$corrected">Corrections</a>, a file of corrected records that were used in grading.
+    </p>
+    <p>
+	<a href="$skipped">Skipped</a>, a file of records that were skipped.
+    </p>
+DOWNLOAD
+    $r->print(&show_grading_menu_form(&get_symb($r,1)));
+    return '';
+}
+
+=pod
+
+=back
+
+=cut
+
 #-------- end of section for handling grading scantron forms -------
 #
 #-------------------------------------------------------------------
 
-
 #-------------------------- Menu interface -------------------------
 #
 #--- Show a Grading Menu button - Calls the next routine ---
 sub show_grading_menu_form {
-    my ($symb,$url)=@_;
+    my ($symb)=@_;
     my $result.='<br /><form action="/adm/grades" method="post">'."\n".
-	'<input type="hidden" name="symb" value="'.$symb.'" />'."\n".
-	'<input type="hidden" name="url" value="'.$url.'" />'."\n".
-	'<input type="hidden" name="saveState"  value="'.$ENV{'form.saveState'}.'" />'."\n".
+	'<input type="hidden" name="symb" value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+	'<input type="hidden" name="saveState"  value="'.$env{'form.saveState'}.'" />'."\n".
 	'<input type="hidden" name="command" value="gradingmenu" />'."\n".
 	'<input type="submit" name="submit" value="Grading Menu" />'."\n".
 	'</form>'."\n";
@@ -3446,8 +6936,8 @@ sub show_grading_menu_form {
 # -- Retrieve choices for grading form
 sub savedState {
     my %savedState = ();
-    if ($ENV{'form.saveState'}) {
-	foreach (split(/:/,$ENV{'form.saveState'})) {
+    if ($env{'form.saveState'}) {
+	foreach (split(/:/,$env{'form.saveState'})) {
 	    my ($key,$value) = split(/=/,$_,2);
 	    $savedState{$key} = $value;
 	}
@@ -3455,13 +6945,103 @@ sub savedState {
     return \%savedState;
 }
 
-#--- Displays the main menu page -------
-sub gradingmenu {
+sub grading_menu {
     my ($request) = @_;
-    my ($symb,$url)=&get_symb_and_url($request);
+    my ($symb)=&get_symb($request);
     if (!$symb) {return '';}
     my $probTitle = &Apache::lonnet::gettitle($symb);
+    my ($table,undef,$hdgrade) = &showResourceInfo($symb,$probTitle);
+
+    #
+    # Define menu data
+    $env{'form.probTitle'} = &Apache::lonnet::gettitle($symb);
+    my ($table) = &showResourceInfo($symb,$env{'form.probTitle'});
+    $request->print($table);
+    my %fields = ('symb'=>&Apache::lonenc::check_encrypt($symb),
+                  'handgrade'=>$hdgrade,
+                  'probTitle'=>$probTitle,
+                  'command'=>'submit_options',
+                  'saveState'=>"",
+                  'gradingMenu'=>1,
+                  'showgrading'=>"yes");
+    my $url = &Apache::lonhtmlcommon::build_url('grades/',\%fields);
+    my @menu = ({ url => $url,
+                     name => &mt('Manual Grading/View Submissions'),
+                     short_description => 
+    &mt('Start the process of hand grading submissions.'),
+                 });
+    $fields{'command'} = 'csvform';
+    $url = &Apache::lonhtmlcommon::build_url('grades/',\%fields);
+    push (@menu, { url => $url,
+                   name => &mt('Upload Scores'),
+                   short_description => 
+            &mt('Specify a file containing the class scores for current resource.')});
+    $fields{'command'} = 'processclicker';
+    $url = &Apache::lonhtmlcommon::build_url('grades/',\%fields);
+    push (@menu, { url => $url,
+                   name => &mt('Process Clicker'),
+                   short_description => 
+            &mt('Specify a file containing the clicker information for this resource.')});
+    $fields{'command'} = 'scantron_selectphase';
+    $url = &Apache::lonhtmlcommon::build_url('grades/',\%fields);
+    push (@menu, { url => $url,
+                   name => &mt('Grade Scantron Forms'),
+                   short_description => 
+            &mt('')});
+    $fields{'command'} = 'verify';
+    $url = &Apache::lonhtmlcommon::build_url('grades/',\%fields);
+    push (@menu, { url => "",
+                   jscript => ' onClick="javascript:checkChoice2(document.forms.gradingMenu,\'5\',\'verify\')" ',
+                   name => &mt('Verify Receipt'),
+                   short_description => 
+            &mt('')});
+    $fields{'command'} = 'manage';
+    $url = &Apache::lonhtmlcommon::build_url('/adm/helper/resettimes.helper',\%fields);
+    push (@menu, { url => $url,
+                   name => &mt('Manage Access Times'),
+                   short_description => 
+            &mt('')});
+    $fields{'command'} = 'view';
+    $url = &Apache::lonhtmlcommon::build_url('/adm/pickcode',\%fields);
+    push (@menu, { url => $url,
+                   name => &mt('View Saved CODEs'),
+                   short_description => 
+            &mt('')});
+
+    #
+    # Create the menu
+    my $Str;
+    # $Str .= '<h2>'.&mt('Please select a grading task').'</h2>';
+    $Str .= '<form method="post" action="" name="gradingMenu">';
+    $Str .= '<input type="hidden" name="command" value="" />'.
+    	'<input type="hidden" name="symb"        value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+	'<input type="hidden" name="handgrade"   value="'.$hdgrade.'" />'."\n".
+	'<input type="hidden" name="probTitle"   value="'.$probTitle.'" ue="" />'."\n".
+	'<input type="hidden" name="saveState"   value="" />'."\n".
+	'<input type="hidden" name="gradingMenu" value="1" />'."\n".
+	'<input type="hidden" name="showgrading" value="yes" />'."\n";
 
+    foreach my $menudata (@menu) {
+        if ($menudata->{'name'} ne &mt('Verify Receipt')) {
+            $Str .='    <h3><a '.
+                $menudata->{'jscript'}.
+                ' href="'.
+                $menudata->{'url'}.'" >'.
+                $menudata->{'name'}."</a></h3>\n";
+        } else {
+            $Str .='    <h3><a '.
+                $menudata->{'jscript'}.
+                ' href="javascript:checkChoice2(document.forms.gradingMenu,\'5\',\'verify\')" >'.
+                $menudata->{'name'}."</a></h3>\n";
+            $Str .= ('&nbsp;'x8).
+                    ' receipt: '.&Apache::lonnet::recprefix($env{'request.course.id'}).
+                    '-<input type="text" name="receipt" size="4" onChange="javascript:checkReceiptNo(this.form,\'OK\')" />';
+        }
+        $Str .= '    '.('&nbsp;'x8).$menudata->{'short_description'}.
+            "\n";
+    }
+    $Str .="</dl>\n";
+    $Str .="</form>\n";
     $request->print(<<GRADINGMENUJS);
 <script type="text/javascript" language="javascript">
     function checkChoice(formname,val,cmdx) {
@@ -3474,12 +7054,29 @@ sub gradingmenu {
 	}
 	formname.command.value = cmd;
 	formname.saveState.value = "saveCmd="+cmdsave+":saveSec="+pullDownSelection(formname.section)+
-	    ":saveSub="+radioSelection(formname.submitonly)+":saveStatus="+pullDownSelection(formname.Status);
+	    ":saveSub="+pullDownSelection(formname.submitonly)+":saveStatus="+pullDownSelection(formname.Status);
+	if (val < 5) formname.submit();
+	if (val == 5) {
+	    if (!checkReceiptNo(formname,'notOK')) { return false;}
+	    formname.submit();
+	}
+	if (val < 7) formname.submit();
+    }
+    function checkChoice2(formname,val,cmdx) {
+	if (val <= 2) {
+	    var cmd = radioSelection(formname.radioChoice);
+	    var cmdsave = cmd;
+	} else {
+	    cmd = cmdx;
+	    cmdsave = 'submission';
+	}
+	formname.command.value = cmd;
 	if (val < 5) formname.submit();
 	if (val == 5) {
 	    if (!checkReceiptNo(formname,'notOK')) { return false;}
 	    formname.submit();
 	}
+	if (val < 7) formname.submit();
     }
 
     function checkReceiptNo(formname,nospace) {
@@ -3498,8 +7095,7 @@ sub gradingmenu {
 </script>
 GRADINGMENUJS
     &commonJSfunctions($request);
-    my $result='<h3>&nbsp;<font color="#339933">Manual Grading/View Submission</font></h3>';
-    my ($table,undef,$hdgrade) = &showResourceInfo($url,$probTitle);
+    my $result='<h3>&nbsp;<span class="LC_info">Manual Grading/View Submission</span></h3>';
     $result.=$table;
     my (undef,$sections) = &getclasslist('all','0');
     my $savedState = &savedState();
@@ -3509,116 +7105,725 @@ GRADINGMENUJS
     my $saveStatus = ($$savedState{'saveStatus'} eq '' ? 'Active' : $$savedState{'saveStatus'});
 
     $result.='<form action="/adm/grades" method="post" name="gradingMenu">'."\n".
-	'<input type="hidden" name="symb"        value="'.$symb.'" />'."\n".
-	'<input type="hidden" name="url"         value="'.$url.'" />'."\n".
+	'<input type="hidden" name="symb"        value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
 	'<input type="hidden" name="handgrade"   value="'.$hdgrade.'" />'."\n".
-	'<input type="hidden" name="probTitle"   value="'.$probTitle.'" />'."\n".
-	'<input type="hidden" name="command"     value="" />'."\n".
+	'<input type="hidden" name="probTitle"   value="'.$probTitle.'" ue="" />'."\n".
 	'<input type="hidden" name="saveState"   value="" />'."\n".
 	'<input type="hidden" name="gradingMenu" value="1" />'."\n".
 	'<input type="hidden" name="showgrading" value="yes" />'."\n";
 
-    $result.='<table width="100%" border=0><tr><td bgcolor=#777777>'."\n".
-	'<table width=100% border=0><tr bgcolor="#e6ffff"><td colspan="2">'."\n".
+    $result.='<table width="100%" border="0"><tr><td bgcolor=#777777>'."\n".
+	'<table width="100%" border="0"><tr bgcolor="#e6ffff"><td colspan="2">'."\n".
 	'&nbsp;<b>Select a Grading/Viewing Option</b></td></tr>'."\n".
 	'<tr bgcolor="#ffffe6" valign="top"><td>'."\n";
 
-    $result.='<table width="100%" border=0>';
+    $result.='<table width="100%" border="0">';
+    $result.='<tr bgcolor="#ffffe6" valign="top">'."\n";
+    $result.='<td><b>'.&mt('Sections').'</b></td>';
+#    $result.='<td>Groups</td>';
+    $result.='<td><b>'.&mt('Access Status').'</td>'."\n";
+    $result.='</tr>';
     $result.='<tr bgcolor="#ffffe6" valign="top"><td>'."\n".
-	'&nbsp;Select Section: <select name="section">'."\n";
+	'&nbsp;<select name="section" multiple="multiple" size="3">'."\n";
     if (ref($sections)) {
-	foreach (sort (@$sections)) {$result.='<option value="'.$_.'" '.
-					 ($saveSec eq $_ ? 'selected="on"' : '').'>'.$_.'</option>'."\n";}
+	foreach (sort (@$sections)) {
+	    $result.='<option value="'.$_.'" '.
+		($saveSec eq $_ ? 'selected="selected"':'').'>'.$_.'</option>'."\n";
+	}
     }
-    $result.= '<option value="all" '.($saveSec eq 'all' ? 'selected="on"' : ''). '>all</select> &nbsp; ';
+    $result.= '<option value="all" '.($saveSec eq 'all' ? 'selected="selected"' : ''). '>all</option></select> &nbsp; ';
+    return $Str;    
+}
 
-    $result.='Student Status:</b>'.&Apache::lonhtmlcommon::StatusOptions($saveStatus,undef,1,undef);
 
+#--- Displays the submissions first page -------
+sub submit_options {
+    my ($request) = @_;
+    my ($symb)=&get_symb($request);
+    if (!$symb) {return '';}
+    my $probTitle = &Apache::lonnet::gettitle($symb);
+
+    $request->print(<<GRADINGMENUJS);
+<script type="text/javascript" language="javascript">
+    function checkChoice(formname,val,cmdx) {
+	if (val <= 2) {
+	    var cmd = radioSelection(formname.radioChoice);
+	    var cmdsave = cmd;
+	} else {
+	    cmd = cmdx;
+	    cmdsave = 'submission';
+	}
+	formname.command.value = cmd;
+	formname.saveState.value = "saveCmd="+cmdsave+":saveSec="+pullDownSelection(formname.section)+
+	    ":saveSub="+pullDownSelection(formname.submitonly)+":saveStatus="+pullDownSelection(formname.Status);
+	if (val < 5) formname.submit();
+	if (val == 5) {
+	    if (!checkReceiptNo(formname,'notOK')) { return false;}
+	    formname.submit();
+	}
+	if (val < 7) formname.submit();
+    }
+
+    function checkReceiptNo(formname,nospace) {
+	var receiptNo = formname.receipt.value;
+	var checkOpt = false;
+	if (nospace == "OK" && isNaN(receiptNo)) {checkOpt = true;}
+	if (nospace == "notOK" && (isNaN(receiptNo) || receiptNo == "")) {checkOpt = true;}
+	if (checkOpt) {
+	    alert("Please enter a receipt number given by a student in the receipt box.");
+	    formname.receipt.value = "";
+	    formname.receipt.focus();
+	    return false;
+	}
+	return true;
+    }
+</script>
+GRADINGMENUJS
+    &commonJSfunctions($request);
+    my $result='<h3>&nbsp;<span class="LC_info">Manual Grading/View Submission</span></h3>';
+    my ($table,undef,$hdgrade) = &showResourceInfo($symb,$probTitle);
+    $result.=$table;
+    my (undef,$sections) = &getclasslist('all','0');
+    my $savedState = &savedState();
+    my $saveCmd = ($$savedState{'saveCmd'} eq '' ? 'submission' : $$savedState{'saveCmd'});
+    my $saveSec = ($$savedState{'saveSec'} eq '' ? 'all' : $$savedState{'saveSec'});
+    my $saveSub = ($$savedState{'saveSub'} eq '' ? 'all' : $$savedState{'saveSub'});
+    my $saveStatus = ($$savedState{'saveStatus'} eq '' ? 'Active' : $$savedState{'saveStatus'});
+
+    $result.='<form action="/adm/grades" method="post" name="gradingMenu">'."\n".
+	'<input type="hidden" name="symb"        value="'.&Apache::lonenc::check_encrypt($symb).'" />'."\n".
+	'<input type="hidden" name="handgrade"   value="'.$hdgrade.'" />'."\n".
+	'<input type="hidden" name="probTitle"   value="'.$probTitle.'" />'."\n".
+	'<input type="hidden" name="command"     value="" />'."\n".
+	'<input type="hidden" name="saveState"   value="" />'."\n".
+	'<input type="hidden" name="gradingMenu" value="1" />'."\n".
+	'<input type="hidden" name="showgrading" value="yes" />'."\n";
+
+    $result.='<table border="0"><tr><td bgcolor=#777777>'."\n".
+	'<table width="100%" border="0"><tr bgcolor="#e6ffff"><td>'."\n".
+	'&nbsp;<b>Select a Grading/Viewing Option</b></td></tr>'."\n".
+	'<tr bgcolor="#ffffe6" valign="top"><td>'."\n";
+
+    $result.='<table width="100%" border="0">';
+    $result.='<tr bgcolor="#ffffe6" valign="top">'."\n";
+    $result.='<td><b>'.&mt('Sections').'</b></td>';
+    $result.='<td><b>'.&mt('Groups').'</b></td>';
+    $result.='<td><b>'.&mt('Access Status').'</td>'."\n";
+    $result.='</tr>';
+    $result.='<tr bgcolor="#ffffe6" valign="top"><td>'."\n".
+	'&nbsp;<select name="section" multiple="multiple" size="3">'."\n";
     if (ref($sections)) {
-	$result.='&nbsp;(Section "no" implies the students were not assigned a section.)<br />' 
-	    if (grep /no/,@$sections);
+	foreach (sort (@$sections)) {
+	    $result.='<option value="'.$_.'" '.
+		($saveSec eq $_ ? 'selected="selected"':'').'>'.$_.'</option>'."\n";
+	}
     }
+    $result.= '<option value="all" '.($saveSec eq 'all' ? 'selected="selected"' : ''). '>all</option></select> &nbsp; ';
+    $result.= '</td><td>'."\n";
+    $result.= &Apache::lonstatistics::GroupSelect('group','multiple',3);
+    $result.='</td><td>'."\n";
+    $result.=&Apache::lonhtmlcommon::StatusOptions($saveStatus,undef,3,undef,'mult');
+
     $result.='</td></tr>';
 
-    $result.='<tr bgcolor="#ffffe6"valign="top"><td>'.
+    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="3"><label>'.
 	'<input type="radio" name="radioChoice" value="submission" '.
-	($saveCmd eq 'submission' ? 'checked' : '').'> '.'<b>Current Resource:</b> For one or more students'.
-	'<br />&nbsp; &nbsp;&nbsp; &nbsp;&nbsp; &nbsp;&nbsp; &nbsp;-->For students with '.
-	'<input type="radio" name="submitonly" value="yes" '.
-	($saveSub eq 'yes' ? 'checked' : '').' /> submissions or '.
-	'<input type="radio" name="submitonly" value="all" '.
-	($saveSub eq 'all' ? 'checked' : '').' /> for all</td></tr>'."\n";
-
-    $result.='<tr bgcolor="#ffffe6"valign="top"><td>'.
-	'<input type="radio" name="radioChoice" value="viewgrades" '.
-	($saveCmd eq 'viewgrades' ? 'checked' : '').'> '.
-	'<b>Current Resource:</b> For all students in selected section or course</td></tr>'."\n";
-
-    $result.='<tr bgcolor="#ffffe6" valign="top"><td>'.
-	'<input type="radio" name="radioChoice" value="pickStudentPage" '.
-	($saveCmd eq 'pickStudentPage' ? 'checked' : '').'> '.
-	'The <b>complete</b> set/page/sequence: For one student</td></tr>'."\n";
+	($saveCmd eq 'submission' ? 'checked="checked"' : '').' /> '.'<b>'.&mt('Current Resource').':</b> '.&mt('For one or more students').
+	'</label> <select name="submitonly">'.
+	'<option value="yes" '.
+	($saveSub eq 'yes' ? 'selected="selected"' : '').'>'.&mt('with submissions').'</option>'.
+	'<option value="queued" '.
+	($saveSub eq 'queued' ? 'selected="selected"' : '').'>'.&mt('in grading queue').'</option>'.
+	'<option value="graded" '.
+	($saveSub eq 'graded' ? 'selected="selected"' : '').'>'.&mt('with ungraded submissions').'</option>'.
+	'<option value="incorrect" '.
+	($saveSub eq 'incorrect' ? 'selected="selected"' : '').'>'.&mt('with incorrect submissions').'</option>'.
+	'<option value="all" '.
+	($saveSub eq 'all' ? 'selected="selected"' : '').'>'.&mt('with any status').'</option></select></td></tr>'."\n";
+
+    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="2">'.
+	'<label><input type="radio" name="radioChoice" value="viewgrades" '.
+	($saveCmd eq 'viewgrades' ? 'checked="checked"' : '').' /> '.
+	'<b>Current Resource:</b> For all students in selected section or course</label></td></tr>'."\n";
+
+    $result.='<tr bgcolor="#ffffe6" valign="top"><td colspan="2">'.
+	'<label><input type="radio" name="radioChoice" value="pickStudentPage" '.
+	($saveCmd eq 'pickStudentPage' ? 'checked="checked"' : '').' /> '.
+	'The <b>complete</b> set/page/sequence: For one student</label></td></tr>'."\n";
 
-    $result.='<tr bgcolor="#ffffe6"><td><br />'.
+    $result.='<tr bgcolor="#ffffe6"><td colspan="2"><br />'.
 	'<input type="button" onClick="javascript:checkChoice(this.form,\'2\');" value="Next->" />'.
 	'</td></tr></table>'."\n";
 
-    $result.='</td><td valign="top">';
+    $result.='</td>'; #<td valign="top">';
 
-    $result.='<table width="100%" border=0>';
-    $result.='<tr bgcolor="#ffffe6"><td>'.
-	'<input type="button" onClick="javascript:checkChoice(this.form,\'3\',\'csvform\');" value="Upload" />'.
-	' scores from file </td></tr>'."\n";
+#    $result.='<table width="100%" border="0">';
+#    $result.='<tr bgcolor="#ffffe6"><td>'.
+#	'<input type="button" onClick="javascript:checkChoice(this.form,\'3\',\'csvform\');" value="'.&mt('Upload').'" />'.
+#	' '.&mt('scores from file').' </td></tr>'."\n";
+#
+#    $result.='<tr bgcolor="#ffffe6"><td>'.
+#        '<input type="button" onClick="javascript:checkChoice(this.form,\'6\',\'processclicker\');" value="'.&mt('Process').'" />'.
+#        ' '.&mt('clicker file').' </td></tr>'."\n";
+#
+#    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="2">'.
+#	'<input type="button" onClick="javascript:checkChoice(this.form,\'4\',\'scantron_selectphase\');'.
+#	'" value="'.&mt('Grade').'" /> scantron forms</td></tr>'."\n";
+#
+#    if ((&Apache::lonnet::allowed('mgr',$env{'request.course.id'})) && ($symb)) {
+#	$result.='<tr bgcolor="#ffffe6"valign="top"><td>'.
+#	    '<input type="button" onClick="javascript:checkChoice(this.form,\'5\',\'verify\');" value="'.&mt('Verify').'" />'.
+#	    ' '.&mt('receipt').': '.
+#	    &Apache::lonnet::recprefix($env{'request.course.id'}).
+#	    '-<input type="text" name="receipt" size="4" onChange="javascript:checkReceiptNo(this.form,\'OK\')" />'.
+#	    '</td></tr>'."\n";
+#    } 
+#    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="2">'.
+#	'<input type="button" onClick="javascript:this.form.action=\'/adm/helper/resettimes.helper\';this.form.submit();'.
+#	'" value="'.&mt('Manage').'" /> access times.</td></tr>'."\n";
+#    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="2">'.
+#	'<input type="button" onClick="javascript:this.form.command.value=\'codelist\';this.form.action=\'/adm/pickcode\';this.form.submit();'.
+#	'" value="'.&mt('View').'" /> saved CODEs.</td></tr>'."\n";
+#
+#    $result.='</table>'."\n".'</td>';
+    $result.= '</tr></table>'."\n".
+	'</td></tr></table></form>'."\n";
+    return $result;
+}
 
-    $result.='<tr bgcolor="#ffffe6"valign="top"><td colspan="2">'.
-	'<input type="button" onClick="javascript:checkChoice(this.form,\'4\',\'scantron_selectphase\');'.
-	'" value="Grade" /> scantron forms</td></tr>'."\n";
+sub reset_perm {
+    undef(%perm);
+}
 
-    if ((&Apache::lonnet::allowed('mgr',$ENV{'request.course.id'})) && ($symb)) {
-	$result.='<tr bgcolor="#ffffe6"valign="top"><td>'.
-	    '<input type="button" onClick="javascript:checkChoice(this.form,\'5\',\'verify\');" value="Verify" />'.
-	    ' submission Receipt no: '.unpack("%32C*",$Apache::lonnet::perlvar{'lonHostID'}).
-	    '-<input type="text" name="receipt" size="4" onChange="javascript:checkReceiptNo(this.form,\'OK\')">'.
-	    '</td></tr>'."\n";
-    } 
+sub init_perm {
+    &reset_perm();
+    foreach my $test_perm ('vgr','mgr','opa') {
+
+	my $scope = $env{'request.course.id'};
+	if (!($perm{$test_perm}=&Apache::lonnet::allowed($test_perm,$scope))) {
+
+	    $scope .= '/'.$env{'request.course.sec'};
+	    if ( $perm{$test_perm}=
+		 &Apache::lonnet::allowed($test_perm,$scope)) {
+		$perm{$test_perm.'_section'}=$env{'request.course.sec'};
+	    } else {
+		delete($perm{$test_perm});
+	    }
+	}
+    }
+}
 
-    $result.='</form></td></tr></table>'."\n".
-	'</td></tr></table>'."\n".
-	'</td></tr></table>'."\n";
+sub gather_clicker_ids {
+    my %clicker_ids;
+
+    my $classlist = &Apache::loncoursedata::get_classlist();
+
+    # Set up a couple variables.
+    my $username_idx = &Apache::loncoursedata::CL_SNAME();
+    my $domain_idx   = &Apache::loncoursedata::CL_SDOM();
+    my $status_idx   = &Apache::loncoursedata::CL_STATUS();
+
+    foreach my $student (keys(%$classlist)) {
+        if ($classlist->{$student}->[$status_idx] ne 'Active') { next; }
+        my $username = $classlist->{$student}->[$username_idx];
+        my $domain   = $classlist->{$student}->[$domain_idx];
+        my $clickers =
+	    (&Apache::lonnet::userenvironment($domain,$username,'clickers'))[1];
+        foreach my $id (split(/\,/,$clickers)) {
+            $id=~s/^[\#0]+//;
+            $id=~s/[\-\:]//g;
+            if (exists($clicker_ids{$id})) {
+		$clicker_ids{$id}.=','.$username.':'.$domain;
+            } else {
+		$clicker_ids{$id}=$username.':'.$domain;
+            }
+        }
+    }
+    return %clicker_ids;
+}
+
+sub gather_adv_clicker_ids {
+    my %clicker_ids;
+    my $cnum=$env{'course.'.$env{'request.course.id'}.'.num'};
+    my $cdom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+    my %coursepersonnel=&Apache::lonnet::get_course_adv_roles($cdom.'/'.$cnum);
+    foreach my $element (sort(keys(%coursepersonnel))) {
+        foreach my $person (split(/\,/,$coursepersonnel{$element})) {
+            my ($puname,$pudom)=split(/\:/,$person);
+            my $clickers =
+		(&Apache::lonnet::userenvironment($pudom,$puname,'clickers'))[1];
+            foreach my $id (split(/\,/,$clickers)) {
+		$id=~s/^[\#0]+//;
+                $id=~s/[\-\:]//g;
+		if (exists($clicker_ids{$id})) {
+		    $clicker_ids{$id}.=','.$puname.':'.$pudom;
+		} else {
+		    $clicker_ids{$id}=$puname.':'.$pudom;
+		}
+            }
+        }
+    }
+    return %clicker_ids;
+}
+
+sub clicker_grading_parameters {
+    return ('gradingmechanism' => 'scalar',
+            'upfiletype' => 'scalar',
+            'specificid' => 'scalar',
+            'pcorrect' => 'scalar',
+            'pincorrect' => 'scalar');
+}
+
+sub process_clicker {
+    my ($r)=@_;
+    my ($symb)=&get_symb($r);
+    if (!$symb) {return '';}
+    my $result=&checkforfile_js();
+    $env{'form.probTitle'} = &Apache::lonnet::gettitle($symb);
+    my ($table) = &showResourceInfo($symb,$env{'form.probTitle'});
+    $result.=$table;
+    $result.='<br /><table width="100%" border="0"><tr><td bgcolor="#777777">'."\n";
+    $result.='<table width="100%" border="0"><tr bgcolor="#e6ffff"><td>'."\n";
+    $result.='&nbsp;<b>'.&mt('Specify a file containing the clicker information for this resource').
+        '.</b></td></tr>'."\n";
+    $result.='<tr bgcolor=#ffffe6><td>'."\n";
+# Attempt to restore parameters from last session, set defaults if not present
+    my %Saveable_Parameters=&clicker_grading_parameters();
+    &Apache::loncommon::restore_course_settings('grades_clicker',
+                                                 \%Saveable_Parameters);
+    if (!$env{'form.pcorrect'}) { $env{'form.pcorrect'}=100; }
+    if (!$env{'form.pincorrect'}) { $env{'form.pincorrect'}=100; }
+    if (!$env{'form.gradingmechanism'}) { $env{'form.gradingmechanism'}='attendance'; }
+    if (!$env{'form.upfiletype'}) { $env{'form.upfiletype'}='iclicker'; }
+
+    my %checked;
+    foreach my $gradingmechanism ('attendance','personnel','specific') {
+       if ($env{'form.gradingmechanism'} eq $gradingmechanism) {
+          $checked{$gradingmechanism}="checked='checked'";
+       }
+    }
+
+    my $upload=&mt("Upload File");
+    my $type=&mt("Type");
+    my $attendance=&mt("Award points just for participation");
+    my $personnel=&mt("Correctness determined from response by course personnel");
+    my $specific=&mt("Correctness determined from response with clicker ID(s)"); 
+    my $pcorrect=&mt("Percentage points for correct solution");
+    my $pincorrect=&mt("Percentage points for incorrect solution");
+    my $selectform=&Apache::loncommon::select_form($env{'form.upfiletype'},'upfiletype',
+						   ('iclicker' => 'i>clicker',
+                                                    'interwrite' => 'interwrite PRS'));
+    $symb = &Apache::lonenc::check_encrypt($symb);
+    $result.=<<ENDUPFORM;
+<script type="text/javascript">
+function sanitycheck() {
+// Accept only integer percentages
+   document.forms.gradesupload.pcorrect.value=Math.round(document.forms.gradesupload.pcorrect.value);
+   document.forms.gradesupload.pincorrect.value=Math.round(document.forms.gradesupload.pincorrect.value);
+// Find out grading choice
+   for (i=0; i<document.forms.gradesupload.gradingmechanism.length; i++) {
+      if (document.forms.gradesupload.gradingmechanism[i].checked) {
+         gradingchoice=document.forms.gradesupload.gradingmechanism[i].value;
+      }
+   }
+// By default, new choice equals user selection
+   newgradingchoice=gradingchoice;
+// Not good to give more points for false answers than correct ones
+   if (Math.round(document.forms.gradesupload.pcorrect.value)<Math.round(document.forms.gradesupload.pincorrect.value)) {
+      document.forms.gradesupload.pcorrect.value=document.forms.gradesupload.pincorrect.value;
+   }
+// If new choice is attendance only, and old choice was correctness-based, restore defaults
+   if ((gradingchoice=='attendance') && (document.forms.gradesupload.waschecked.value!='attendance')) {
+      document.forms.gradesupload.pcorrect.value=100;
+      document.forms.gradesupload.pincorrect.value=100;
+   }
+// If the values are different, cannot be attendance only
+   if ((Math.round(document.forms.gradesupload.pcorrect.value)!=Math.round(document.forms.gradesupload.pincorrect.value)) &&
+       (gradingchoice=='attendance')) {
+       newgradingchoice='personnel';
+   }
+// Change grading choice to new one
+   for (i=0; i<document.forms.gradesupload.gradingmechanism.length; i++) {
+      if (document.forms.gradesupload.gradingmechanism[i].value==newgradingchoice) {
+         document.forms.gradesupload.gradingmechanism[i].checked=true;
+      } else {
+         document.forms.gradesupload.gradingmechanism[i].checked=false;
+      }
+   }
+// Remember the old state
+   document.forms.gradesupload.waschecked.value=newgradingchoice;
+}
+</script>
+<form method="post" enctype="multipart/form-data" action="/adm/grades" name="gradesupload">
+<input type="hidden" name="symb" value="$symb" />
+<input type="hidden" name="command" value="processclickerfile" />
+<input type="hidden" name="probTitle" value="$env{'form.probTitle'}" />
+<input type="hidden" name="saveState"  value="$env{'form.saveState'}" />
+<input type="file" name="upfile" size="50" />
+<br /><label>$type: $selectform</label>
+<br /><label>$attendance: <input type="radio" name="gradingmechanism" value="attendance" $checked{'attendance'} onClick="sanitycheck()" /></label>
+<br /><label>$personnel: <input type="radio" name="gradingmechanism" value="personnel" $checked{'personnel'} onClick="sanitycheck()" /></label>
+<br /><label>$specific: <input type="radio" name="gradingmechanism" value="specific" $checked{'specific'} onClick="sanitycheck()" /></label>
+<input type="text" name="specificid" value="$env{'form.specificid'}" size="20" />
+<input type="hidden" name="waschecked" value="$env{'form.gradingmechanism'}" />
+<br /><label>$pcorrect: <input type="text" name="pcorrect" size="4" value="$env{'form.pcorrect'}" onChange="sanitycheck()" /></label>
+<br /><label>$pincorrect: <input type="text" name="pincorrect" size="4" value="$env{'form.pincorrect'}" onChange="sanitycheck()" /></label>
+<br /><input type="button" onClick="javascript:checkUpload(this.form);" value="$upload" />
+</form>
+ENDUPFORM
+    $result.='</td></tr></table>'."\n".
+             '</td></tr></table><br /><br />'."\n";
+    $result.=&show_grading_menu_form($symb);
     return $result;
 }
 
+sub process_clicker_file {
+    my ($r)=@_;
+    my ($symb)=&get_symb($r);
+    if (!$symb) {return '';}
+
+    my %Saveable_Parameters=&clicker_grading_parameters();
+    &Apache::loncommon::store_course_settings('grades_clicker',
+                                              \%Saveable_Parameters);
+
+    my ($result) = &showResourceInfo($symb,$env{'form.probTitle'});
+    if (($env{'form.gradingmechanism'} eq 'specific') && ($env{'form.specificid'}!~/\w/)) {
+	$result.='<span class="LC_error">'.&mt('You need to specify a clicker ID for the correct answer').'</span>';
+	return $result.&show_grading_menu_form($symb);
+    }
+    my %clicker_ids=&gather_clicker_ids();
+    my %correct_ids;
+    if ($env{'form.gradingmechanism'} eq 'personnel') {
+	%correct_ids=&gather_adv_clicker_ids();
+    }
+    if ($env{'form.gradingmechanism'} eq 'specific') {
+	foreach my $correct_id (split(/[\s\,]/,$env{'form.specificid'})) {;
+	   $correct_id=~tr/a-z/A-Z/;
+	   $correct_id=~s/\s//gs;
+	   $correct_id=~s/^[\#0]+//;
+           $correct_id=~s/[\-\:]//g;
+           if ($correct_id) {
+	      $correct_ids{$correct_id}='specified';
+           }
+        }
+    }
+    if ($env{'form.gradingmechanism'} eq 'attendance') {
+	$result.=&mt('Score based on attendance only');
+    } else {
+	my $number=0;
+	$result.='<p><b>'.&mt('Correctness determined by the following IDs').'</b>';
+	foreach my $id (sort(keys(%correct_ids))) {
+	    $result.='<br /><tt>'.$id.'</tt> - ';
+	    if ($correct_ids{$id} eq 'specified') {
+		$result.=&mt('specified');
+	    } else {
+		my ($uname,$udom)=split(/\:/,$correct_ids{$id});
+		$result.=&Apache::loncommon::plainname($uname,$udom);
+	    }
+	    $number++;
+	}
+        $result.="</p>\n";
+	if ($number==0) {
+	    $result.='<span class="LC_error">'.&mt('No IDs found to determine correct answer').'</span>';
+	    return $result.&show_grading_menu_form($symb);
+	}
+    }
+    if (length($env{'form.upfile'}) < 2) {
+        $result.=&mt('[_1] Error: [_2] The file you attempted to upload, [_3] contained no information. Please check that you entered the correct filename.',
+		     '<span class="LC_error">',
+		     '</span>',
+		     '<span class="LC_filename">'.&HTML::Entities::encode($env{'form.upfile.filename'},'<>&"').'</span>');
+        return $result.&show_grading_menu_form($symb);
+    }
+
+# Were able to get all the info needed, now analyze the file
+
+    $result.=&Apache::loncommon::studentbrowser_javascript();
+    $symb = &Apache::lonenc::check_encrypt($symb);
+    my $heading=&mt('Scanning clicker file');
+    $result.=(<<ENDHEADER);
+<br /><table width="100%" border="0"><tr><td bgcolor="#777777">
+<table width="100%" border="0"><tr bgcolor="#e6ffff"><td>
+<b>$heading</b></td></tr><tr bgcolor=#ffffe6><td>
+<form method="post" action="/adm/grades" name="clickeranalysis">
+<input type="hidden" name="symb" value="$symb" />
+<input type="hidden" name="command" value="assignclickergrades" />
+<input type="hidden" name="probTitle" value="$env{'form.probTitle'}" />
+<input type="hidden" name="saveState"  value="$env{'form.saveState'}" />
+<input type="hidden" name="gradingmechanism" value="$env{'form.gradingmechanism'}" />
+<input type="hidden" name="pcorrect" value="$env{'form.pcorrect'}" />
+<input type="hidden" name="pincorrect" value="$env{'form.pincorrect'}" />
+ENDHEADER
+    my %responses;
+    my @questiontitles;
+    my $errormsg='';
+    my $number=0;
+    if ($env{'form.upfiletype'} eq 'iclicker') {
+	($errormsg,$number)=&iclicker_eval(\@questiontitles,\%responses);
+    }
+    if ($env{'form.upfiletype'} eq 'interwrite') {
+        ($errormsg,$number)=&interwrite_eval(\@questiontitles,\%responses);
+    }
+    $result.='<br />'.&mt('Found [_1] question(s)',$number).'<br />'.
+             '<input type="hidden" name="number" value="'.$number.'" />'.
+             &mt('Awarding [_1] percent for corrion(s)',$number).'<br />'.
+             '<input type="hidden" name="number" value="'.$number.'" />'.
+             &mt('Awarding [_1] percent for correct and [_2] percent for incorrect responses',
+                 $env{'form.pcorrect'},$env{'form.pincorrect'}).
+             '<br />';
+# Remember Question Titles
+# FIXME: Possibly need delimiter other than ":"
+    for (my $i=0;$i<$number;$i++) {
+        $result.='<input type="hidden" name="question:'.$i.'" value="'.
+                 &HTML::Entities::encode($questiontitles[$i],'"&<>').'" />';
+    }
+    my $correct_count=0;
+    my $student_count=0;
+    my $unknown_count=0;
+# Match answers with usernames
+# FIXME: Possibly need delimiter other than ":"
+    foreach my $id (keys(%responses)) {
+       if ($correct_ids{$id}) {
+          $result.="\n".'<input type="hidden" name="correct:'.$correct_count.':'.$correct_ids{$id}.'" value="'.$responses{$id}.'" />';
+          $correct_count++;
+       } elsif ($clicker_ids{$id}) {
+          if ($clicker_ids{$id}=~/\,/) {
+# More than one user with the same clicker!
+             $result.="\n<hr />".&mt('Clicker registered more than once').": <tt>".$id."</tt><br />";
+             $result.="\n".'<input type="hidden" name="unknown:'.$id.'" value="'.$responses{$id}.'" />'.
+                           "<select name='multi".$id."'>";
+             foreach my $reguser (sort(split(/\,/,$clicker_ids{$id}))) {
+                 $result.="<option value='".$reguser."'>".&Apache::loncommon::plainname(split(/\:/,$reguser)).' ('.$reguser.')</option>';
+             }
+             $result.='</select>';
+             $unknown_count++;
+          } else {
+# Good: found one and only one user with the right clicker
+             $result.="\n".'<input type="hidden" name="student:'.$clicker_ids{$id}.'" value="'.$responses{$id}.'" />';
+             $student_count++;
+          }
+       } else {
+          $result.="\n<hr />".&mt('Unregistered Clicker')." <tt>".$id."</tt><br />";
+          $result.="\n".'<input type="hidden" name="unknown:'.$id.'" value="'.$responses{$id}.'" />'.
+                   "\n".&mt("Username").": <input type='text' name='uname".$id."' />&nbsp;".
+                   "\n".&mt("Domain").": ".
+                   &Apache::loncommon::select_dom_form($env{'course.'.$env{'request.course.id'}.'.domain'},'udom'.$id).'&nbsp;'.
+                   &Apache::loncommon::selectstudent_link('clickeranalysis','uname'.$id,'udom'.$id);
+          $unknown_count++;
+       }
+    }
+    $result.='<hr />'.
+             &mt('Found [_1] registered and [_2] unregistered clickers.',$student_count,$unknown_count);
+    if ($env{'form.gradingmechanism'} ne 'attendance') {
+       if ($correct_count==0) {
+          $errormsg.="Found no correct answers answers for grading!";
+       } elsif ($correct_count>1) {
+          $result.='<br /><span class="LC_warning">'.&mt("Found [_1] entries for grading!",$correct_count).'</span>';
+       }
+    }
+    if ($number<1) {
+       $errormsg.="Found no questions.";
+    }
+    if ($errormsg) {
+       $result.='<br /><span class="LC_error">'.&mt($errormsg).'</span>';
+    } else {
+       $result.='<br /><input type="submit" name="finalize" value="'.&mt('Finalize Grading').'" />';
+    }
+    $result.='</form></td></tr></table>'."\n".
+             '</td></tr></table><br /><br />'."\n";
+    return $result.&show_grading_menu_form($symb);
+}
+
+sub iclicker_eval {
+    my ($questiontitles,$responses)=@_;
+    my $number=0;
+    my $errormsg='';
+    foreach my $line (split(/[\n\r]/,$env{'form.upfile'})) {
+        my %components=&Apache::loncommon::record_sep($line);
+        my @entries=map {$components{$_}} (sort(keys(%components)));
+	if ($entries[0] eq 'Question') {
+	    for (my $i=3;$i<$#entries;$i+=6) {
+		$$questiontitles[$number]=$entries[$i];
+		$number++;
+	    }
+	}
+	if ($entries[0]=~/^\#/) {
+	    my $id=$entries[0];
+	    my @idresponses;
+	    $id=~s/^[\#0]+//;
+	    for (my $i=0;$i<$number;$i++) {
+		my $idx=3+$i*6;
+		push(@idresponses,$entries[$idx]);
+	    }
+	    $$responses{$id}=join(',',@idresponses);
+	}
+    }
+    return ($errormsg,$number);
+}
+
+sub interwrite_eval {
+    my ($questiontitles,$responses)=@_;
+    my $number=0;
+    my $errormsg='';
+    my $skipline=1;
+    my $questionnumber=0;
+    my %idresponses=();
+    foreach my $line (split(/[\n\r]/,$env{'form.upfile'})) {
+        my %components=&Apache::loncommon::record_sep($line);
+        my @entries=map {$components{$_}} (sort(keys(%components)));
+        if ($entries[1] eq 'Time') { $skipline=0; next; }
+        if ($entries[1] eq 'Response') { $skipline=1; }
+        next if $skipline;
+        if ($entries[0]!=$questionnumber) {
+           $questionnumber=$entries[0];
+           $$questiontitles[$number]=&mt('Question [_1]',$questionnumber);
+           $number++;
+        }
+        my $id=$entries[4];
+        $id=~s/^[\#0]+//;
+        $id=~s/^v\d*\://i;
+        $id=~s/[\-\:]//g;
+        $idresponses{$id}[$number]=$entries[6];
+    }
+    foreach my $id (keys %idresponses) {
+       $$responses{$id}=join(',',@{$idresponses{$id}});
+       $$responses{$id}=~s/^\s*\,//;
+    }
+    return ($errormsg,$number);
+}
+
+sub assign_clicker_grades {
+    my ($r)=@_;
+    my ($symb)=&get_symb($r);
+    if (!$symb) {return '';}
+# See which part we are saving to
+    my ($partlist,$handgrade,$responseType) = &response_type($symb);
+# FIXME: This should probably look for the first handgradeable part
+    my $part=$$partlist[0];
+# Start screen output
+    my ($result) = &showResourceInfo($symb,$env{'form.probTitle'});
+
+    my $heading=&mt('Assigning grades based on clicker file');
+    $result.=(<<ENDHEADER);
+<br /><table width="100%" border="0"><tr><td bgcolor="#777777">
+<table width="100%" border="0"><tr bgcolor="#e6ffff"><td>
+<b>$heading</b></td></tr><tr bgcolor=#ffffe6><td>
+ENDHEADER
+# Get correct result
+# FIXME: Possibly need delimiter other than ":"
+    my @correct=();
+    my $gradingmechanism=$env{'form.gradingmechanism'};
+    my $number=$env{'form.number'};
+    if ($gradingmechanism ne 'attendance') {
+       foreach my $key (keys(%env)) {
+          if ($key=~/^form\.correct\:/) {
+             my @input=split(/\,/,$env{$key});
+             for (my $i=0;$i<=$#input;$i++) {
+                 if (($correct[$i]) && ($input[$i]) &&
+                     ($correct[$i] ne $input[$i])) {
+                    $result.='<br /><span class="LC_warning">'.
+                             &mt('More than one correct result given for question "[_1]": [_2] versus [_3].',
+                                 $env{'form.question:'.$i},$correct[$i],$input[$i]).'</span>';
+                 } elsif ($input[$i]) {
+                    $correct[$i]=$input[$i];
+                 }
+             }
+          }
+       }
+       for (my $i=0;$i<$number;$i++) {
+          if (!$correct[$i]) {
+             $result.='<br /><span class="LC_error">'.
+                      &mt('No correct result given for question "[_1]"!',
+                          $env{'form.question:'.$i}).'</span>';
+          }
+       }
+       $result.='<br />'.&mt("Correct answer: [_1]",join(', ',map { ($_?$_:'-') } @correct));
+    }
+# Start grading
+    my $pcorrect=$env{'form.pcorrect'};
+    my $pincorrect=$env{'form.pincorrect'};
+    my $storecount=0;
+    foreach my $key (keys(%env)) {
+       my $user='';
+       if ($key=~/^form\.student\:(.*)$/) {
+          $user=$1;
+       }
+       if ($key=~/^form\.unknown\:(.*)$/) {
+          my $id=$1;
+          if (($env{'form.uname'.$id}) && ($env{'form.udom'.$id})) {
+             $user=$env{'form.uname'.$id}.':'.$env{'form.udom'.$id};
+          } elsif ($env{'form.multi'.$id}) {
+             $user=$env{'form.multi'.$id};
+          }
+       }
+       if ($user) { 
+          my @answer=split(/\,/,$env{$key});
+          my $sum=0;
+          for (my $i=0;$i<$number;$i++) {
+             if ($answer[$i]) {
+                if ($gradingmechanism eq 'attendance') {
+                   $sum+=$pcorrect;
+                } else {
+                   if ($answer[$i] eq $correct[$i]) {
+                      $sum+=$pcorrect;
+                   } else {
+                      $sum+=$pincorrect;
+                   }
+                }
+             }
+          }
+          my $ave=$sum/(100*$number);
+# Store
+          my ($username,$domain)=split(/\:/,$user);
+          my %grades=();
+          $grades{"resource.$part.solved"}='correct_by_override';
+          $grades{"resource.$part.awarded"}=$ave;
+          $grades{"resource.regrader"}="$env{'user.name'}:$env{'user.domain'}";
+          my $returncode=&Apache::lonnet::cstore(\%grades,$symb,
+                                                 $env{'request.course.id'},
+                                                 $domain,$username);
+          if ($returncode ne 'ok') {
+             $result.="<br /><span class=\"LC_error\">Failed to save student $username:$domain. Message when trying to save was ($returncode)</span>";
+          } else {
+             $storecount++;
+          }
+       }
+    }
+# We are done
+    $result.='<br />'.&mt('Successfully stored grades for [_1] student(s).',$storecount).
+             '</td></tr></table>'."\n".
+             '</td></tr></table><br /><br />'."\n";
+    return $result.&show_grading_menu_form($symb);
+}
+
 sub handler {
     my $request=$_[0];
-
-    undef(%perm);
-    if ($ENV{'browser.mathml'}) {
-	$request->content_type('text/xml');
+    &reset_caches();
+    if ($env{'browser.mathml'}) {
+	&Apache::loncommon::content_type($request,'text/xml');
     } else {
-	$request->content_type('text/html');
+	&Apache::loncommon::content_type($request,'text/html');
     }
     $request->send_http_header;
     return '' if $request->header_only;
     &Apache::loncommon::get_unprocessed_cgi($ENV{'QUERY_STRING'});
-    my $url=$ENV{'form.url'};
-    my $symb=$ENV{'form.symb'};
-    my $command=$ENV{'form.command'};
-    if (!$url) {
-	my ($temp1,$temp2);
-	($temp1,$temp2,$ENV{'form.url'})=split(/___/,$symb);
-	$url = $ENV{'form.url'};
-    }
-    &send_header($request);
-    if ($url eq '' && $symb eq '') {
-	if ($ENV{'user.adv'}) {
-	    if (($ENV{'form.codeone'}) && ($ENV{'form.codetwo'}) &&
-		($ENV{'form.codethree'})) {
-		my $token=$ENV{'form.codeone'}.'*'.$ENV{'form.codetwo'}.'*'.
-		    $ENV{'form.codethree'};
+    my $symb=&get_symb($request,1);
+    my @commands=&Apache::loncommon::get_env_multiple('form.command');
+    my $command=$commands[0];
+    if ($#commands > 0) {
+	&Apache::lonnet::logthis("grades got multiple commands ".join(':',@commands));
+    }
+    $request->print(&Apache::loncommon::start_page('Grading'));
+    if ($symb eq '' && $command eq '') {
+	if ($env{'user.adv'}) {
+	    if (($env{'form.codeone'}) && ($env{'form.codetwo'}) &&
+		($env{'form.codethree'})) {
+		my $token=$env{'form.codeone'}.'*'.$env{'form.codetwo'}.'*'.
+		    $env{'form.codethree'};
 		my ($tsymb,$tuname,$tudom,$tcrsid)=
 		    &Apache::lonnet::checkin($token);
 		if ($tsymb) {
-		    my ($map,$id,$url)=split(/\_\_\_/,$tsymb);
+		    my ($map,$id,$url)=&Apache::lonnet::decode_symb($tsymb);
 		    if (&Apache::lonnet::allowed('mgr',$tcrsid)) {
 			$request->print(&Apache::lonnet::ssi_body('/res/'.$url,
 					  ('grade_username' => $tuname,
@@ -3636,23 +7841,9 @@ sub handler {
 	    }
 	}
     } else {
-	if (!($perm{'vgr'}=&Apache::lonnet::allowed('vgr',$ENV{'request.course.id'}))) {
-	    if ($perm{'vgr'}=&Apache::lonnet::allowed('vgr',$ENV{'request.course.id'}.'/'.$ENV{'request.course.sec'})) {
-		$perm{'vgr_section'}=$ENV{'request.course.sec'};
-	    } else {
-		delete($perm{'vgr'});
-	    }
-	}
-	if (!($perm{'mgr'}=&Apache::lonnet::allowed('mgr',$ENV{'request.course.id'}))) {
-	    if ($perm{'mgr'}=&Apache::lonnet::allowed('mgr',$ENV{'request.course.id'}.'/'.$ENV{'request.course.sec'})) {
-		$perm{'mgr_section'}=$ENV{'request.course.sec'};
-	    } else {
-		delete($perm{'mgr'});
-	    }
-	}
-
+	&init_perm();
 	if ($command eq 'submission' && $perm{'vgr'}) {
-	    ($ENV{'form.student'} eq '' ? &listStudents($request) : &submission($request,0,0));
+	    ($env{'form.student'} eq '' ? &listStudents($request) : &submission($request,0,0));
 	} elsif ($command eq 'pickStudentPage' && $perm{'vgr'}) {
 	    &pickStudentPage($request);
 	} elsif ($command eq 'displayPage' && $perm{'vgr'}) {
@@ -3662,7 +7853,9 @@ sub handler {
 	} elsif ($command eq 'processGroup' && $perm{'vgr'}) {
 	    &processGroup($request);
 	} elsif ($command eq 'gradingmenu' && $perm{'vgr'}) {
-	    $request->print(&gradingmenu($request));
+	    $request->print(&grading_menu($request));
+	} elsif ($command eq 'submit_options' && $perm{'vgr'}) {
+	    $request->print(&submit_options($request));
 	} elsif ($command eq 'viewgrades' && $perm{'vgr'}) {
 	    $request->print(&viewgrades($request));
 	} elsif ($command eq 'handgrade' && $perm{'mgr'}) {
@@ -3671,52 +7864,59 @@ sub handler {
 	    $request->print(&editgrades($request));
 	} elsif ($command eq 'verify' && $perm{'vgr'}) {
 	    $request->print(&verifyreceipt($request));
+        } elsif ($command eq 'processclicker' && $perm{'mgr'}) {
+            $request->print(&process_clicker($request));
+        } elsif ($command eq 'processclickerfile' && $perm{'mgr'}) {
+            $request->print(&process_clicker_file($request));
+        } elsif ($command eq 'assignclickergrades' && $perm{'mgr'}) {
+            $request->print(&assign_clicker_grades($request));
 	} elsif ($command eq 'csvform' && $perm{'mgr'}) {
 	    $request->print(&upcsvScores_form($request));
 	} elsif ($command eq 'csvupload' && $perm{'mgr'}) {
 	    $request->print(&csvupload($request));
 	} elsif ($command eq 'csvuploadmap' && $perm{'mgr'} ) {
 	    $request->print(&csvuploadmap($request));
-	} elsif ($command eq 'csvuploadassign' && $perm{'mgr'}) {
-	    if ($ENV{'form.associate'} ne 'Reverse Association') {
-		$request->print(&csvuploadassign($request));
+	} elsif ($command eq 'csvuploadoptions' && $perm{'mgr'}) {
+	    if ($env{'form.associate'} ne 'Reverse Association') {
+		$request->print(&csvuploadoptions($request));
 	    } else {
-		if ( $ENV{'form.upfile_associate'} ne 'reverse' ) {
-		    $ENV{'form.upfile_associate'} = 'reverse';
+		if ( $env{'form.upfile_associate'} ne 'reverse' ) {
+		    $env{'form.upfile_associate'} = 'reverse';
 		} else {
-		    $ENV{'form.upfile_associate'} = 'forward';
+		    $env{'form.upfile_associate'} = 'forward';
 		}
 		$request->print(&csvuploadmap($request));
 	    }
+	} elsif ($command eq 'csvuploadassign' && $perm{'mgr'} ) {
+	    $request->print(&csvuploadassign($request));
 	} elsif ($command eq 'scantron_selectphase' && $perm{'mgr'}) {
 	    $request->print(&scantron_selectphase($request));
+ 	} elsif ($command eq 'scantron_warning' && $perm{'mgr'}) {
+ 	    $request->print(&scantron_do_warning($request));
+	} elsif ($command eq 'scantron_validate' && $perm{'mgr'}) {
+	    $request->print(&scantron_validate_file($request));
 	} elsif ($command eq 'scantron_process' && $perm{'mgr'}) {
 	    $request->print(&scantron_process_students($request));
+ 	} elsif ($command eq 'scantronupload' && 
+ 		 (&Apache::lonnet::allowed('usc',$env{'request.role.domain'})||
+		  &Apache::lonnet::allowed('usc',$env{'request.course.id'}))) {
+ 	    $request->print(&scantron_upload_scantron_data($request)); 
+ 	} elsif ($command eq 'scantronupload_save' &&
+ 		 (&Apache::lonnet::allowed('usc',$env{'request.role.domain'})||
+		  &Apache::lonnet::allowed('usc',$env{'request.course.id'}))) {
+ 	    $request->print(&scantron_upload_scantron_data_save($request));
+ 	} elsif ($command eq 'scantron_download' &&
+		 &Apache::lonnet::allowed('usc',$env{'request.course.id'})) {
+ 	    $request->print(&scantron_download_scantron_data($request));
 	} elsif ($command) {
-	    $request->print("Access Denied");
+	    $request->print("Access Denied ($command)");
 	}
     }
-    &send_footer($request);
+    $request->print(&Apache::loncommon::end_page());
+    &reset_caches();
     return '';
 }
 
-sub send_header {
-    my ($request)= @_;
-    $request->print(&Apache::lontexconvert::header());
-#  $request->print("
-#<script>
-#remotewindow=open('','homeworkremote');
-#remotewindow.close();
-#</script>"); 
-    $request->print(&Apache::loncommon::bodytag('Grading'));
-}
-
-sub send_footer {
-    my ($request)= @_;
-    $request->print('</body>');
-    $request->print(&Apache::lontexconvert::footer());
-}
-
 1;
 
 __END__;