--- loncom/html/adm/jmol/Jmol.js 2005/07/01 20:23:42 1.1
+++ loncom/html/adm/jmol/Jmol.js 2007/10/11 00:42:00 1.3
@@ -1,730 +1,1431 @@
-/* $RCSfile: Jmol.js,v $
- * $Author: albertel $
- * $Date: 2005/07/01 20:23:42 $
- * $Revision: 1.1 $
- *
- * Copyright (C) 2004 The Jmol Development Team
- *
- * Contact: jmol-developers@lists.sf.net
- *
- * This library is free software; you can redistribute it and/or
- * modify it under the terms of the GNU Lesser General Public
- * License as published by the Free Software Foundation; either
- * version 2.1 of the License, or (at your option) any later version.
- *
- * This library is distributed in the hope that it will be useful,
- * but WITHOUT ANY WARRANTY; without even the implied warranty of
- * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
- * Lesser General Public License for more details.
- *
- * You should have received a copy of the GNU Lesser General Public
- * License along with this library; if not, write to the Free Software
- * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA
- * 02111-1307 USA.
- */
-
-// for documentation see www.jmol.org/jslibrary
-
-var undefined; // for IE 5 ... wherein undefined is undefined
-
-////////////////////////////////////////////////////////////////
-// Basic Scripting infrastruture
-////////////////////////////////////////////////////////////////
-
-function jmolInitialize(codebaseDirectory) {
- if (_jmol.initialized) {
- alert("jmolInitialize() should only be called *ONCE* within a page");
- return;
- }
- if (! codebaseDirectory) {
- alert("codebaseDirectory is a required parameter to jmolInitialize");
- codebaseDirectory = ".";
- }
- if (codebaseDirectory.indexOf("http://") == 0 ||
- codebaseDirectory.indexOf("https://") == 0)
- alert("codebaseDirectory should be directory relative,\n" +
- "not be an absolute URL : " + codebaseDirectory);
- else if (codebaseDirectory.charAt(0) == '/')
- alert("codebaseDirectory should be directory relative,\n" +
- "not relative to the root of the web server : " + codebaseDirectory);
- _jmolSetCodebase(codebaseDirectory);
- _jmolOnloadResetForms();
- _jmol.initialized = true;
-}
-
-function jmolSetAppletColor(boxbgcolor, boxfgcolor, progresscolor) {
- _jmolInitCheck();
- _jmol.boxbgcolor = boxbgcolor;
- if (boxfgcolor)
- _jmol.boxfgcolor = boxfgcolor
- else if (boxbgcolor == "white" || boxbgcolor == "#FFFFFF")
- _jmol.boxfgcolor = "black";
- else
- _jmol.boxfgcolor = "white";
- if (progresscolor)
- _jmol.progresscolor = progresscolor;
- if (_jmol.debugAlert)
- alert(" boxbgcolor=" + _jmol.boxbgcolor +
- " boxfgcolor=" + _jmol.boxfgcolor +
- " progresscolor=" + _jmol.progresscolor);
-}
-
-function jmolApplet(size, script, nameSuffix) {
- _jmolInitCheck();
- _jmolApplet(size, null, script, nameSuffix);
-}
-
-////////////////////////////////////////////////////////////////
-// Basic controls
-////////////////////////////////////////////////////////////////
-
-function jmolButton(script, label, id) {
- _jmolInitCheck();
- var scriptIndex = _jmolAddScript(script);
- if (label == undefined || label == null)
- label = script.substring(0, 32);
- if (id == undefined || id == null)
- id = "jmolButton" + _jmol.buttonCount;
- ++_jmol.buttonCount;
- var t = "";
- if (_jmol.debugAlert)
- alert(t);
- document.write(t);
-}
-
-function jmolCheckbox(scriptWhenChecked, scriptWhenUnchecked,
- labelHtml, isChecked, id) {
- _jmolInitCheck();
- if (id == undefined || id == null)
- id = "jmolCheckbox" + _jmol.checkboxCount;
- ++_jmol.checkboxCount;
- if (scriptWhenChecked == undefined || scriptWhenChecked == null ||
- scriptWhenUnchecked == undefined || scriptWhenUnchecked == null) {
- alert("jmolCheckbox requires two scripts");
- return;
- }
- if (labelHtml == undefined || labelHtml == null) {
- alert("jmolCheckbox requires a label");
- return;
- }
- var indexChecked = _jmolAddScript(scriptWhenChecked);
- var indexUnchecked = _jmolAddScript(scriptWhenUnchecked);
- var t = "" +
- labelHtml;
- if (_jmol.debugAlert)
- alert(t);
- document.write(t);
-}
-
-function jmolRadioGroup(arrayOfRadioButtons, separatorHtml, groupName) {
- _jmolInitCheck();
- var type = typeof arrayOfRadioButtons;
- if (type != "object" || type == null || ! arrayOfRadioButtons.length) {
- alert("invalid arrayOfRadioButtons");
- return;
- }
- if (separatorHtml == undefined || separatorHtml == null)
- separatorHtml = " ";
- var length = arrayOfRadioButtons.length;
- var t = "";
- jmolStartNewRadioGroup();
- for (var i = 0; i < length; ++i) {
- var radio = arrayOfRadioButtons[i];
- type = typeof radio;
- if (type == "object") {
- t += _jmolRadio(radio[0], radio[1], radio[2], separatorHtml, groupName);
- } else {
- t += _jmolRadio(radio, null, null, separatorHtml, groupName);
- }
- }
- if (_jmol.debugAlert)
- alert(t);
- document.write(t);
-}
-
-function jmolLink(script, text, id) {
- _jmolInitCheck();
- if (id == undefined || id == null)
- id = "jmolLink" + _jmol.linkCount;
- ++_jmol.linkCount;
- var scriptIndex = _jmolAddScript(script);
- var t = "" + text + "";
- if (_jmol.debugAlert)
- alert(t);
- document.write(t);
-}
-
-function jmolMenu(arrayOfMenuItems, size, id) {
- _jmolInitCheck();
- if (id == undefined || id == null)
- id = "jmolMenu" + _jmol.menuCount;
- ++_jmol.menuCount;
- var type = typeof arrayOfMenuItems;
- if (type != null && type == "object" && arrayOfMenuItems.length) {
- var length = arrayOfMenuItems.length;
- if (typeof size != "number" || size == 1)
- size = null;
- else if (size < 0)
- size = length;
- var sizeText = size ? " size='" + size + "' " : "";
- var t = "