--- loncom/interface/loncommon.pm	2012/12/22 15:53:00	1.1075.2.21
+++ loncom/interface/loncommon.pm	2013/06/05 13:25:41	1.1075.2.39
@@ -1,7 +1,7 @@
 # The LearningOnline Network with CAPA
 # a pile of common routines
 #
-# $Id: loncommon.pm,v 1.1075.2.21 2012/12/22 15:53:00 raeburn Exp $
+# $Id: loncommon.pm,v 1.1075.2.39 2013/06/05 13:25:41 raeburn Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -67,6 +67,8 @@ use Apache::lonhtmlcommon();
 use Apache::loncoursedata();
 use Apache::lontexconvert();
 use Apache::lonclonecourse();
+use Apache::lonuserutils();
+use Apache::lonuserstate();
 use LONCAPA qw(:DEFAULT :match);
 use DateTime::TimeZone;
 use DateTime::Locale::Catalog;
@@ -526,7 +528,8 @@ ENDAUTHORBRW
 }
 
 sub coursebrowser_javascript {
-    my ($domainfilter,$sec_element,$formname,$role_element,$crstype) = @_;
+    my ($domainfilter,$sec_element,$formname,$role_element,$crstype,
+        $credits_element) = @_;
     my $wintitle = 'Course_Browser';
     if ($crstype eq 'Community') {
         $wintitle = 'Community_Browser';
@@ -589,8 +592,9 @@ sub coursebrowser_javascript {
     }
 $id_functions
 ENDSTDBRW
-    if (($sec_element ne '') || ($role_element ne '')) {
-        $output .= &setsec_javascript($sec_element,$formname,$role_element);
+    if (($sec_element ne '') || ($role_element ne '') || ($credits_element ne '')) {
+        $output .= &setsec_javascript($sec_element,$formname,$role_element,
+                                      $credits_element);
     }
     $output .= '
 // ]]>
@@ -747,7 +751,7 @@ ENDUSERBRW
 }
 
 sub setsec_javascript {
-    my ($sec_element,$formname,$role_element) = @_;
+    my ($sec_element,$formname,$role_element,$credits_element) = @_;
     my (@courserolenames,@communityrolenames,$rolestr,$courserolestr,
         $communityrolestr);
     if ($role_element ne '') {
@@ -842,6 +846,14 @@ function setRole(crstype) {
 }
 |;
     }
+    if ($credits_element) {
+        $setsections .= qq|
+function setCredits(defaultcredits) {
+    document.$formname.$credits_element.value = defaultcredits;
+    return;
+}
+|;
+    }
     return $setsections;
 }
 
@@ -996,6 +1008,7 @@ sub select_language {
             $langchoices{$code} = &plainlanguagedescription($id);
         }
     }
+    %langchoices = &Apache::lonlocal::texthash(%langchoices);
     return &select_form($selected,$name,\%langchoices);
 }
 
@@ -1027,6 +1040,12 @@ linked_select_forms takes the following
 
 =item * $menuorder, the order of values in the first menu
 
+=item * $onchangefirst, additional javascript call to execute for an onchange
+        event for the first <select> tag
+
+=item * $onchangesecond, additional javascript call to execute for an onchange
+        event for the second <select> tag
+
 =back 
 
 Below is an example of such a hash.  Only the 'text', 'default', and 
@@ -1080,6 +1099,8 @@ sub linked_select_forms {
         $secondselectname, 
         $hashref,
         $menuorder,
+        $onchangefirst,
+        $onchangesecond
         ) = @_;
     my $second = "document.$formname.$secondselectname";
     my $first = "document.$formname.$firstselectname";
@@ -1136,7 +1157,7 @@ function select1_changed() {
 </script>
 END
     # output the initial values for the selection lists
-    $result .= "<select size=\"1\" name=\"$firstselectname\" onchange=\"select1_changed()\">\n";
+    $result .= "<select size=\"1\" name=\"$firstselectname\" onchange=\"select1_changed();$onchangefirst\">\n";
     my @order = sort(keys(%{$hashref}));
     if (ref($menuorder) eq 'ARRAY') {
         @order = @{$menuorder};
@@ -1149,7 +1170,11 @@ END
     $result .= "</select>\n";
     my %select2 = %{$hashref->{$firstdefault}->{'select2'}};
     $result .= $middletext;
-    $result .= "<select size=\"1\" name=\"$secondselectname\">\n";
+    $result .= "<select size=\"1\" name=\"$secondselectname\"";
+    if ($onchangesecond) {
+        $result .= ' onchange="'.$onchangesecond.'"';
+    }
+    $result .= ">\n";
     my $seconddefault = $hashref->{$firstdefault}->{'default'};
     
     my @secondorder = sort(keys(%select2));
@@ -2136,7 +2161,7 @@ sub select_level_form {
 
 =pod
 
-=item * &select_dom_form($defdom,$name,$includeempty,$showdomdesc,$onchange,$incdoms)
+=item * &select_dom_form($defdom,$name,$includeempty,$showdomdesc,$onchange,$incdoma,$excdoms)
 
 Returns a string containing a <select name='$name' size='1'> form to 
 allow a user to select the domain to preform an operation in.  
@@ -2149,25 +2174,31 @@ If the $showdomdesc flag is set, the dom
 
 The optional $onchange argument specifies what should occur if the domain selector is changed, e.g., 'this.form.submit()' if the form is to be automatically submitted.
 
-The optional $incdoms is a reference to an array of domains which will be the only available options. 
+The optional $incdoms is a reference to an array of domains which will be the only available options.
+
+The optional $excdoms is a reference to an array of domains which will be excluded from the available options. 
 
 =cut
 
 #-------------------------------------------
 sub select_dom_form {
-    my ($defdom,$name,$includeempty,$showdomdesc,$onchange,$incdoms) = @_;
+    my ($defdom,$name,$includeempty,$showdomdesc,$onchange,$incdoms,$excdoms) = @_;
     if ($onchange) {
         $onchange = ' onchange="'.$onchange.'"';
     }
-    my @domains;
+    my (@domains,%exclude);
     if (ref($incdoms) eq 'ARRAY') {
         @domains = sort {lc($a) cmp lc($b)} (@{$incdoms});
     } else {
         @domains = sort {lc($a) cmp lc($b)} (&Apache::lonnet::all_domains());
     }
     if ($includeempty) { @domains=('',@domains); }
+    if (ref($excdoms) eq 'ARRAY') {
+        map { $exclude{$_} = 1; } @{$excdoms};
+    }
     my $selectdomain = "<select name=\"$name\" size=\"1\"$onchange>\n";
     foreach my $dom (@domains) {
+        next if ($exclude{$dom});
         $selectdomain.="<option value=\"$dom\" ".
             ($dom eq $defdom ? 'selected="selected" ' : '').'>'.$dom;
         if ($showdomdesc) {
@@ -4885,7 +4916,7 @@ sub CSTR_pageheader {
 
     my $londocroot = $Apache::lonnet::perlvar{'lonDocRoot'};
     my ($udom,$uname,$thisdisfn)=
-        ($trailfile =~ m{^\Q$londocroot\E/priv/([^/]+)/([^/]+)/(.*)$});
+        ($trailfile =~ m{^\Q$londocroot\E/priv/([^/]+)/([^/]+)(?:|/(.*))$});
     my $formaction = "/priv/$udom/$uname/$thisdisfn";
     $formaction =~ s{/+}{/}g;
 
@@ -5026,8 +5057,6 @@ sub bodytag {
     }
 
     if (!$realm) { $realm='&nbsp;'; }
-# Set messages
-    my $messages=&domainlogo($domain);
 
     my $extra_body_attr = &make_attr_string($forcereg,\%design);
 
@@ -5035,16 +5064,14 @@ sub bodytag {
     my $bodytag = "<body $extra_body_attr>".
 	&Apache::lontexconvert::init_math_support($args->{'inherit_jsmath'});
 
-    if ($bodyonly) {
+    &get_unprocessed_cgi($ENV{'QUERY_STRING'}, ['inhibitmenu']);
+
+    if (($bodyonly) || ($no_nav_bar) || ($env{'form.inhibitmenu'} eq 'yes')) {
         return $bodytag;
-    } 
+    }
 
-    my $name = &plainname($env{'user.name'},$env{'user.domain'});
     if ($public) {
 	undef($role);
-    } else {
-	$name = &aboutmewrapper($name,$env{'user.name'},$env{'user.domain'},
-                                undef,'LC_menubuttons_link');
     }
     
     my $titleinfo = '<h1>'.$title.'</h1>';
@@ -5060,14 +5087,11 @@ sub bodytag {
     }
 
     $role = '<span class="LC_nobreak">('.$role.')</span>' if $role;
-    &get_unprocessed_cgi($ENV{'QUERY_STRING'}, ['inhibitmenu']);
-
-    if ($no_nav_bar || $env{'form.inhibitmenu'} eq 'yes') { 
-        return $bodytag; 
-    }
 
     if ($env{'request.state'} eq 'construct') { $forcereg=1; }
 
+
+
     my $funclist;
     if (($env{'environment.remote'} eq 'on') && ($env{'request.state'} ne 'construct')) {
         $bodytag .= Apache::lonhtmlcommon::scripttag(Apache::lonmenu::utilityfunctions(), 'start')."\n".
@@ -5086,27 +5110,25 @@ sub bodytag {
         #        $titleinfo = &CSTR_pageheader(); #FIXME: Will be removed once all scripts have their own calls
         #    }
 
+        $bodytag .= Apache::lonhtmlcommon::scripttag(
+            Apache::lonmenu::utilityfunctions(), 'start');
 
+        my ($left,$right) = Apache::lonmenu::primary_menu();
 
         if ($env{'request.noversionuri'} =~ m{^/res/adm/pages/}) {
-            unless ($env{'request.noversionuri'} =~ m{/res/adm/pages/bookmarkmenu/}) {
-                if ($dc_info) {
-                     $dc_info = qq|<span class="LC_cusr_subheading">$dc_info</span>|;
-                }
-                $bodytag .= qq|<div id="LC_nav_bar">$name $role<br />
-                               <em>$realm</em> $dc_info</div>|;
+            if ($dc_info) {
+                 $dc_info = qq|<span class="LC_cusr_subheading">$dc_info</span>|;
             }
+            $bodytag .= qq|<div id="LC_nav_bar">$left $role<br />
+                           <em>$realm</em> $dc_info</div>|;
             return $bodytag;
         }
 
         unless ($env{'request.symb'} =~ m/\.page___\d+___/) {
-            $bodytag .= qq|<div id="LC_nav_bar">$name $role</div>|;
+            $bodytag .= qq|<div id="LC_nav_bar">$left $role</div>|;
         }
 
-        $bodytag .= Apache::lonhtmlcommon::scripttag(
-            Apache::lonmenu::utilityfunctions(), 'start');
-
-        $bodytag .= Apache::lonmenu::primary_menu();
+        $bodytag .= $right;
 
         if ($dc_info) {
             $dc_info = &dc_courseid_toggle($dc_info);
@@ -5122,7 +5144,8 @@ sub bodytag {
                 $bodytag .= &Apache::lonmenu::innerregister($forcereg,
                                 $args->{'bread_crumbs'});
             } elsif ($forcereg) { 
-                $bodytag .= &Apache::lonmenu::innerregister($forcereg);
+                $bodytag .= &Apache::lonmenu::innerregister($forcereg,undef,
+                                                            $args->{'group'});
             } else {
                 my $forbodytag;
                 &Apache::lonmenu::prepare_functions($env{'request.noversionuri'},
@@ -5161,9 +5184,15 @@ sub bodytag {
         $dc_info = qq|<span class="LC_cusr_subheading">($dc_info)</span>|;
     }
 
+    my $name = &plainname($env{'user.name'},$env{'user.domain'});
+    unless ($public) {
+        $name = &aboutmewrapper($name,$env{'user.name'},$env{'user.domain'},
+                                undef,'LC_menubuttons_link');
+    }
+
     unless ($env{'form.inhibitmenu'}) {
         $bodytag .= qq|<div id="LC_nav_bar">$name $role</div>
-                       <ol class="LC_primary_menu LC_right">
+                       <ol class="LC_primary_menu LC_floatright LC_right">
                        <li>$menu</li>
                        </ol><div id="LC_realm"> $realm $dc_info</div>|;
     }
@@ -5353,6 +5382,14 @@ form, .inline {
   vertical-align:middle;
 }
 
+.LC_floatleft {
+  float: left;
+}
+
+.LC_floatright {
+  float: right;
+}
+
 .LC_400Box {
   width:400px;
 }
@@ -5696,7 +5733,8 @@ table.LC_nested tr.LC_empty_row td {
   padding: 8px;
 }
 
-table.LC_data_table tr.LC_empty_row td {
+table.LC_data_table tr.LC_empty_row td,
+table.LC_data_table tr.LC_footer_row td {
   background-color: $sidebg;
 }
 
@@ -6422,6 +6460,11 @@ div.LC_edit_problem_saves {
   padding-bottom: 5px;
 }
 
+.LC_edit_opt {
+  padding-left: 1em;
+  white-space: nowrap;
+}
+
 img.stift {
   border-width: 0;
   vertical-align: middle;
@@ -6436,6 +6479,7 @@ div.LC_createcourse {
 }
 
 .LC_dccid {
+  float: right;
   margin: 0.2em 0 0 0;
   padding: 0;
   font-size: 90%;
@@ -6533,7 +6577,6 @@ fieldset > legend {
 }
 
 ol.LC_primary_menu {
-  float: right;
   margin: 0;
   padding: 0;
   background-color: $pgbg_or_bgcolor;
@@ -6630,7 +6673,7 @@ ol.LC_docs_parameters li.LC_docs_paramet
 }
 
 ul#LC_secondary_menu {
-  clear: both;
+  clear: right;
   color: $fontmenu;
   background: $tabbg;
   list-style: none;
@@ -6678,7 +6721,7 @@ ul#LC_secondary_menu li ul li {
   vertical-align: top;
   border-left: 1px solid black;
   border-right: 1px solid black;
-  background-color: $data_table_light
+  background-color: $data_table_light;
   list-style:none;
   float: none;
 }
@@ -7495,7 +7538,10 @@ sub start_page {
 		}else{
 			$result .= &Apache::lonhtmlcommon::breadcrumbs();
 		}
-    } elsif ($env{'request.noversionuri'} =~ m{^/res/}) {
+    } elsif (($env{'environment.remote'} eq 'on') &&
+             ($env{'form.inhibitmenu'} ne 'yes') &&
+             ($env{'request.noversionuri'} =~ m{^/res/}) &&
+             ($env{'request.noversionuri'} !~ m{^/res/adm/pages/})) {
         $result .= '<div style="padding:0;margin:0;clear:both"><hr /></div>';
     }
     return $result;
@@ -7760,11 +7806,9 @@ sub LCprogressbar {
     $LCcurrentid=$$.'_'.$LCidcnt;
     my $starting=&mt('Starting');
     my $content=(<<ENDPROGBAR);
-<p>
   <div id="progressbar$LCcurrentid">
     <span class="pblabel">$starting</span>
   </div>
-</p>
 ENDPROGBAR
     &r_print($r,$content.&LCprogressbar_script($LCcurrentid));
 }
@@ -8178,7 +8222,19 @@ sub get_sections {
     my %sectioncount;
     my $now = time;
 
-    if (!defined($possible_roles) || (grep(/^st$/,@$possible_roles))) {
+    my $check_students = 1;
+    my $only_students = 0;
+    if (ref($possible_roles) eq 'ARRAY') {
+        if (grep(/^st$/,@{$possible_roles})) {
+            if (@{$possible_roles} == 1) {
+                $only_students = 1;
+            }
+        } else {
+            $check_students = 0;
+        }
+    }
+
+    if ($check_students) {
 	my ($classlist) = &Apache::loncoursedata::get_classlist($cdom,$cnum);
 	my $sec_index = &Apache::loncoursedata::CL_SECTION();
 	my $status_index = &Apache::loncoursedata::CL_STATUS();
@@ -8205,6 +8261,9 @@ sub get_sections {
 	    }
 	}
     }
+    if ($only_students) {
+        return %sectioncount;
+    }
     my %courseroles = &Apache::lonnet::dump('nohist_userroles',$cdom,$cnum);
     foreach my $user (sort(keys(%courseroles))) {
 	if ($user !~ /^(\w{2})/) { next; }
@@ -8352,7 +8411,7 @@ sub get_course_users {
                               active   => 'Active',
                               future   => 'Future',
                             );
-        my %nothide;
+        my (%nothide,@possdoms);
         if ($hidepriv) {
             my %coursehash=&Apache::lonnet::coursedescription($cdom.'_'.$cnum);
             foreach my $user (split(/\s*\,\s*/,$coursehash{'nothideprivileged'})) {
@@ -8362,6 +8421,10 @@ sub get_course_users {
                     $nothide{$user} = 1;
                 }
             }
+            my @possdoms = ($cdom);
+            if ($coursehash{'checkforpriv'}) {
+                push(@possdoms,split(/,/,$coursehash{'checkforpriv'}));
+            }
         }
         foreach my $person (sort(keys(%coursepersonnel))) {
             my $match = 0;
@@ -8397,7 +8460,7 @@ sub get_course_users {
                 }
                 if ($uname ne '' && $udom ne '') {
                     if ($hidepriv) {
-                        if ((&Apache::lonnet::privileged($uname,$udom)) &&
+                        if ((&Apache::lonnet::privileged($uname,$udom,\@possdoms)) &&
                             (!$nothide{$uname.':'.$udom})) {
                             next;
                         }
@@ -9488,18 +9551,23 @@ sub ask_for_embedded_content {
     my $heading = &mt('Upload embedded files');
     my $buttontext = &mt('Upload');
 
-    my $navmap;
+    my ($navmap,$cdom,$cnum);
     if ($env{'request.course.id'}) {
-        $navmap = Apache::lonnavmaps::navmap->new();
+        if ($actionurl eq '/adm/dependencies') {
+            $navmap = Apache::lonnavmaps::navmap->new();
+        }
+        $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+        $cnum = $env{'course.'.$env{'request.course.id'}.'.num'};
     }
-    if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) {
+    if (($actionurl eq '/adm/portfolio') ||
+        ($actionurl eq '/adm/coursegrp_portfolio')) {
         my $current_path='/';
         if ($env{'form.currentpath'}) {
             $current_path = $env{'form.currentpath'};
         }
         if ($actionurl eq '/adm/coursegrp_portfolio') {
-            $udom = $env{'course.'.$env{'request.course.id'}.'.domain'};
-            $uname = $env{'course.'.$env{'request.course.id'}.'.num'};
+            $udom = $cdom;
+            $uname = $cnum;
             $url = '/userfiles/groups/'.$env{'form.group'}.'/portfolio';
         } else {
             $udom = $env{'user.domain'};
@@ -9531,24 +9599,42 @@ sub ask_for_embedded_content {
         }
     } elsif ($actionurl eq '/adm/dependencies') {
         if ($env{'request.course.id'} ne '') {
-            $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
-            $cnum =  $env{'course.'.$env{'request.course.id'}.'.num'};
             if (ref($args) eq 'HASH') {
                 $url = $args->{'docs_url'};
                 $title = $args->{'docs_title'};
-                $toplevel = "/$url";
+                $toplevel = $url;
+                unless ($toplevel =~ m{^/}) {
+                    $toplevel = "/$url";
+                }
                 ($rem) = ($toplevel =~ m{^(.+/)[^/]+$});
-                ($path) =  
-                    ($toplevel =~ m{^(\Q/uploaded/$cdom/$cnum/\E(?:docs|supplemental)/(?:default|\d+)/\d+)/});
+                if ($toplevel =~ m{^(\Q/uploaded/$cdom/$cnum/portfolio/syllabus\E)}) {
+                    $path = $1;
+                } else {
+                    ($path) =
+                        ($toplevel =~ m{^(\Q/uploaded/$cdom/$cnum/\E(?:docs|supplemental)/(?:default|\d+)/\d+)/});
+                }
                 $fileloc = &Apache::lonnet::filelocation('',$toplevel);
                 $fileloc =~ s{^/}{};
                 ($filename) = ($fileloc =~ m{.+/([^/]+)$});
                 $heading = &mt('Status of dependencies in [_1]',"$title ($filename)");
             }
         }
-    }
-    my $now = time();
-    foreach my $embed_file (keys(%{$allfiles})) {
+    } elsif ($actionurl eq "/public/$cdom/$cnum/syllabus") {
+        $udom = $cdom;
+        $uname = $cnum;
+        $url = "/uploaded/$cdom/$cnum/portfolio/syllabus";
+        $toplevel = $url;
+        $path = $url;
+        $fileloc = &Apache::lonnet::filelocation('',$toplevel).'/';
+        $fileloc =~ s{^/}{};
+    }
+    foreach my $file (keys(%{$allfiles})) {
+        my $embed_file;
+        if (($path eq "/uploaded/$cdom/$cnum/portfolio/syllabus") && ($file =~ m{^\Q$path/\E(.+)$})) {
+            $embed_file = $1;
+        } else {
+            $embed_file = $file;
+        }
         my $absolutepath;
         if ($embed_file =~ m{^\w+://}) {
             $newfiles{$embed_file} = 1;
@@ -9586,7 +9672,8 @@ sub ask_for_embedded_content {
     my $dirptr = 16384;
     foreach my $path (keys(%subdependencies)) {
         $currsubfile{$path} = {};
-        if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) { 
+        if (($actionurl eq '/adm/portfolio') ||
+            ($actionurl eq '/adm/coursegrp_portfolio')) { 
             my ($sublistref,$listerror) =
                 &Apache::lonnet::dirlist($url.$path,$udom,$uname,$getpropath);
             if (ref($sublistref) eq 'ARRAY') {
@@ -9602,9 +9689,15 @@ sub ask_for_embedded_content {
             }
         } elsif (($actionurl eq '/adm/dependencies') ||
                  (($actionurl eq '/adm/coursedocs') && (ref($args) eq 'HASH') &&
-                  ($args->{'context'} eq 'paste'))) {
+                  ($args->{'context'} eq 'paste')) ||
+                 ($actionurl eq "/public/$cdom/$cnum/syllabus")) {
             if ($env{'request.course.id'} ne '') {
-                my ($dir) = ($fileloc =~ m{^(.+/)[^/]+$});
+                my $dir;
+                if ($actionurl eq "/public/$cdom/$cnum/syllabus") {
+                    $dir = $fileloc;
+                } else {
+                    ($dir) = ($fileloc =~ m{^(.+/)[^/]+$});
+                }
                 if ($dir ne '') {
                     my ($sublistref,$listerror) =
                         &Apache::lonnet::dirlist($dir.$path,$cdom,$cnum,$getpropath,undef,'/');
@@ -9652,7 +9745,8 @@ sub ask_for_embedded_content {
         }
     }
     my %currfile;
-    if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) {
+    if (($actionurl eq '/adm/portfolio') ||
+        ($actionurl eq '/adm/coursegrp_portfolio')) {
         my ($dirlistref,$listerror) =
             &Apache::lonnet::dirlist($url,$udom,$uname,$getpropath);
         if (ref($dirlistref) eq 'ARRAY') {
@@ -9668,7 +9762,8 @@ sub ask_for_embedded_content {
         }
     } elsif (($actionurl eq '/adm/dependencies') ||
              (($actionurl eq '/adm/coursedocs') && (ref($args) eq 'HASH') &&
-              ($args->{'context'} eq 'paste'))) {
+              ($args->{'context'} eq 'paste')) ||
+             ($actionurl eq "/public/$cdom/$cnum/syllabus")) {
         if ($env{'request.course.id'} ne '') {
             my ($dir) = ($fileloc =~ m{^(.+/)[^/]+$});
             if ($dir ne '') {
@@ -9703,12 +9798,14 @@ sub ask_for_embedded_content {
                 ($file eq $filename.'.bak') ||
                 ($dependencies{$file})) {
             if ($actionurl eq '/adm/dependencies') {
-                next if (($rem ne '') &&
-                         (($env{"httpref.$rem".$file} ne '') ||
-                          (ref($navmap) &&
-                          (($navmap->getResourceByUrl($rem.$file) ne '') ||
-                           (($file =~ /^(.*\.s?html?)\.bak$/i) &&
-                            ($navmap->getResourceByUrl($rem.$1)))))));
+                unless ($toplevel =~ m{^\Q/uploaded/$cdom/$cnum/portfolio/syllabus\E}) {
+                    next if (($rem ne '') &&
+                             (($env{"httpref.$rem".$file} ne '') ||
+                              (ref($navmap) &&
+                              (($navmap->getResourceByUrl($rem.$file) ne '') ||
+                               (($file =~ /^(.*\.s?html?)\.bak$/i) &&
+                                ($navmap->getResourceByUrl($rem.$1)))))));
+                }
             }
             $unused{$file} = 1;
         }
@@ -9718,27 +9815,37 @@ sub ask_for_embedded_content {
         $counter = scalar(keys(%existing));
         $numpathchg = scalar(keys(%pathchanges));
         return ($output,$counter,$numpathchg,\%existing);
+    } elsif (($actionurl eq "/public/$cdom/$cnum/syllabus") &&
+             (ref($args) eq 'HASH') && ($args->{'context'} eq 'rewrites')) {
+        $counter = scalar(keys(%existing));
+        $numpathchg = scalar(keys(%pathchanges));
+        return ($output,$counter,$numpathchg,\%existing,\%mapping);
     }
     foreach my $embed_file (sort {lc($a) cmp lc($b)} keys(%newfiles)) {
         if ($actionurl eq '/adm/dependencies') {
             next if ($embed_file =~ m{^\w+://});
         }
         $upload_output .= &start_data_table_row().
-                          '<td><img src="'.&icon($embed_file).'" />&nbsp;'.
+                          '<td valign="top"><img src="'.&icon($embed_file).'" />&nbsp;'.
                           '<span class="LC_filename">'.$embed_file.'</span>';
         unless ($mapping{$embed_file} eq $embed_file) {
-            $upload_output .= '<br /><span class="LC_info" style="font-size:smaller;">'.&mt('changed from: [_1]',$mapping{$embed_file}).'</span>';
+            $upload_output .= '<br /><span class="LC_info" style="font-size:smaller;">'.
+                              &mt('changed from: [_1]',$mapping{$embed_file}).'</span>';
         }
-        $upload_output .= '</td><td>';
+        $upload_output .= '</td>';
         if ($args->{'ignore_remote_references'} && $embed_file =~ m{^\w+://}) { 
-            $upload_output.='<span class="LC_warning">'.&mt("URL points to other server.").'</span>';
+            $upload_output.='<td align="right">'.
+                            '<span class="LC_info LC_fontsize_medium">'.
+                            &mt("URL points to web address").'</span>';
             $numremref++;
         } elsif ($args->{'error_on_invalid_names'}
             && $embed_file ne &Apache::lonnet::clean_filename($embed_file,{'keep_path' => 1,})) {
-            $upload_output.='<span class="LC_warning">'.&mt('Invalid characters').'</span>';
+            $upload_output.='<td align="right"><span class="LC_warning">'.
+                            &mt('Invalid characters').'</span>';
             $numinvalid++;
         } else {
-            $upload_output .= &embedded_file_element('upload_embedded',$counter,
+            $upload_output .= '<td>'.
+                              &embedded_file_element('upload_embedded',$counter,
                                                      $embed_file,\%mapping,
                                                      $allfiles,$codebase,'upload');
             $counter ++;
@@ -9767,8 +9874,9 @@ sub ask_for_embedded_content {
             $counter ++;
         } else {
             $upload_output .= &start_data_table_row().
-                              '<td><span class="LC_filename">'.$embed_file.'</span></td>';
-                              '<td><span class="LC_warning">'.&mt('Already exists').'</span></td>'.
+                              '<td valign="top"><img src="'.&icon($embed_file).'" />&nbsp;'.
+                              '<span class="LC_filename">'.$embed_file.'</span></td>'.
+                              '<td align="right"><span class="LC_info LC_fontsize_medium">'.&mt('Already exists').'</span></td>'.
                               &Apache::loncommon::end_data_table_row()."\n";
         }
     }
@@ -9863,7 +9971,7 @@ sub ask_for_embedded_content {
         $output = '<b>'.&mt('Referenced files').'</b>:<br />';
         if ($applies > 1) {
             $output .=  
-                &mt('No files need to be uploaded, as one of the following applies to each reference:').'<ul>';
+                &mt('No dependencies need to be uploaded, as one of the following applies to each reference:').'<ul>';
             if ($numremref) {
                 $output .= '<li>'.&mt('reference is to a URL which points to another server').'</li>'."\n";
             }
@@ -9906,7 +10014,7 @@ sub ask_for_embedded_content {
             $chgcount ++;
         }
     }
-    if ($counter) {
+    if (($counter) || ($numunused)) {
         if ($numpathchg) {
             $output .= '<input type ="hidden" name="number_pathchange_items" value="'.
                        $numpathchg.'" />'."\n";
@@ -9919,13 +10027,13 @@ sub ask_for_embedded_content {
         } elsif ($actionurl eq '/adm/dependencies') {
             $output .= '<input type="hidden" name="action" value="process_changes" />';
         }
-        $output .=  '<input type ="submit" value="'.$buttontext.'" />'."\n".'</form>'."\n";
+        $output .= '<input type ="submit" value="'.$buttontext.'" />'."\n".'</form>'."\n";
     } elsif ($numpathchg) {
         my %pathchange = ();
         $output .= &modify_html_form('pathchange',$actionurl,$state,\%pathchange,$pathchange_output);
         if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) {
             $output .= '<p>'.&mt('or').'</p>'; 
-        } 
+        }
     }
     return ($output,$counter,$numpathchg);
 }
@@ -10061,21 +10169,23 @@ sub upload_embedded {
             $output .= &mt('Unrecognized file extension ([_1]) - rename the file with a proper extension and re-upload.',$1).'<br />';
             next;
         } elsif ($fname=~/\.(\d+)\.(\w+)$/) {
-            $output .= &mt('File name not allowed - rename the file to remove the number immediately before the file extension([_1]) and re-upload.',$2).'<br />';
+            $output .= &mt('Filename not allowed - rename the file to remove the number immediately before the file extension([_1]) and re-upload.',$2).'<br />';
             next;
         }
         $env{'form.embedded_item_'.$i.'.filename'}=$fname;
+        my $subdir = $path;
+        $subdir =~ s{/+$}{};
         if ($context eq 'portfolio') {
             my $result;
             if ($state eq 'existingfile') {
                 $result=
                     &Apache::lonnet::userfileupload('embedded_item_'.$i,'existingfile',
-                                                    $dirpath.$env{'form.currentpath'}.$path);
+                                                    $dirpath.$env{'form.currentpath'}.$subdir);
             } else {
                 $result=
                     &Apache::lonnet::userfileupload('embedded_item_'.$i,'',
                                                     $dirpath.
-                                                    $env{'form.currentpath'}.$path);
+                                                    $env{'form.currentpath'}.$subdir);
                 if ($result !~ m|^/uploaded/|) {
                     $output .= '<span class="LC_error">'
                                .&mt('An error occurred ([_1]) while trying to upload [_2] for embedded element [_3].'
@@ -10087,10 +10197,11 @@ sub upload_embedded {
                                $path.$fname.'</span>').'<br />';     
                 }
             }
-        } elsif ($context eq 'coursedoc') {
+        } elsif (($context eq 'coursedoc') || ($context eq 'syllabus')) {
+            my $extendedsubdir = $dirpath.'/'.$subdir;
+            $extendedsubdir =~ s{/+$}{};
             my $result =
-                &Apache::lonnet::userfileupload('embedded_item_'.$i,'coursedoc',
-                                                $dirpath.'/'.$path);
+                &Apache::lonnet::userfileupload('embedded_item_'.$i,$context,$extendedsubdir);
             if ($result !~ m|^/uploaded/|) {
                 $output .= '<span class="LC_error">'
                            .&mt('An error occurred ([_1]) while trying to upload [_2] for embedded element [_3].'
@@ -10100,6 +10211,9 @@ sub upload_embedded {
             } else {
                 $output .= &mt('Uploaded [_1]','<span class="LC_filename">'.
                            $path.$fname.'</span>').'<br />';
+                if ($context eq 'syllabus') {
+                    &Apache::lonnet::make_public_indefinitely($result);
+                }
             }
         } else {
 # Save the file
@@ -10231,7 +10345,7 @@ sub modify_html_form {
 }
 
 sub modify_html_refs {
-    my ($context,$dirpath,$uname,$udom,$dir_root) = @_;
+    my ($context,$dirpath,$uname,$udom,$dir_root,$url) = @_;
     my $container;
     if ($context eq 'portfolio') {
         $container = $env{'form.container'};
@@ -10240,12 +10354,14 @@ sub modify_html_refs {
     } elsif ($context eq 'manage_dependencies') {
         (undef,undef,$container) = &Apache::lonnet::decode_symb($env{'form.symb'});
         $container = "/$container";
+    } elsif ($context eq 'syllabus') {
+        $container = $url;
     } else {
         $container = $Apache::lonnet::perlvar{'lonDocRoot'}.$env{'form.filename'};
     }
     my (%allfiles,%codebase,$output,$content);
     my @changes = &get_env_multiple('form.namechange');
-    unless (@changes > 0) {
+    unless ((@changes > 0)  || ($context eq 'syllabus')) {
         if (wantarray) {
             return ('',0,0); 
         } else {
@@ -10253,7 +10369,7 @@ sub modify_html_refs {
         }
     }
     if (($context eq 'portfolio') || ($context eq 'coursedoc') || 
-        ($context eq 'manage_dependencies')) {
+        ($context eq 'manage_dependencies') || ($context eq 'syllabus')) {
         unless ($container =~ m{^/uploaded/\Q$udom\E/\Q$uname\E/}) {
             if (wantarray) {
                 return ('',0,0);
@@ -10309,6 +10425,7 @@ sub modify_html_refs {
                     if ($content =~ m{($attrib_regexp\s*=\s*['"]?)\Q$ref\E(['"]?)}) {
                         my $numchg = ($content =~ s{($attrib_regexp\s*=\s*['"]?)\Q$ref\E(['"]?)}{$1$newname$2}gi);
                         $count += $numchg;
+                        $allfiles{$newname} = $allfiles{$ref};
                     }
                     if ($env{'form.embedded_codebase_'.$i} ne '') {
                         $codebase = &unescape($env{'form.embedded_codebase_'.$i});
@@ -10317,10 +10434,11 @@ sub modify_html_refs {
                     }
                 }
             }
+            my $skiprewrites;
             if ($count || $codebasecount) {
                 my $saveresult;
                 if (($context eq 'portfolio') || ($context eq 'coursedoc') || 
-                    ($context eq 'manage_dependencies')) {
+                    ($context eq 'manage_dependencies') || ($context eq 'syllabus')) {
                     my $url = &Apache::lonnet::store_edited_file($container,$content,$udom,$uname,\$saveresult);
                     if ($url eq $container) {
                         my ($fname) = ($container =~ m{/([^/]+)$});
@@ -10333,6 +10451,11 @@ sub modify_html_refs {
                                    '<span class="LC_filename">'.
                                    $container.'</span>').'</p>';
                     }
+                    if ($context eq 'syllabus') {
+                        unless ($saveresult eq 'ok') {
+                            $skiprewrites = 1;
+                        }
+                    }
                 } else {
                     if (open(my $fh,">$container")) {
                         print $fh $content;
@@ -10348,6 +10471,47 @@ sub modify_html_refs {
                     }
                 }
             }
+            if (($context eq 'syllabus') && (!$skiprewrites)) {
+                my ($actionurl,$state);
+                $actionurl = "/public/$udom/$uname/syllabus";
+                my ($ignore,$num,$numpathchanges,$existing,$mapping) =
+                    &ask_for_embedded_content($actionurl,$state,\%allfiles,
+                                              \%codebase,
+                                              {'context' => 'rewrites',
+                                               'ignore_remote_references' => 1,});
+                if (ref($mapping) eq 'HASH') {
+                    my $rewrites = 0;
+                    foreach my $key (keys(%{$mapping})) {
+                        next if ($key =~ m{^https?://});
+                        my $ref = $mapping->{$key};
+                        my $newname = "/uploaded/$udom/$uname/portfolio/syllabus/$key";
+                        my $attrib;
+                        if (ref($allfiles{$mapping->{$key}}) eq 'ARRAY') {
+                            $attrib = join('|',@{$allfiles{$mapping->{$key}}});
+                        }
+                        if ($content =~ m{($attrib\s*=\s*['"]?)\Q$ref\E(['"]?)}) {
+                            my $numchg = ($content =~ s{($attrib\s*=\s*['"]?)\Q$ref\E(['"]?)}{$1$newname$2}gi);
+                            $rewrites += $numchg;
+                        }
+                    }
+                    if ($rewrites) {
+                        my $saveresult;
+                        my $url = &Apache::lonnet::store_edited_file($container,$content,$udom,$uname,\$saveresult);
+                        if ($url eq $container) {
+                            my ($fname) = ($container =~ m{/([^/]+)$});
+                            $output .= '<p>'.&mt('Rewrote [quant,_1,link] as [quant,_1,absolute link] in [_2].',
+                                            $count,'<span class="LC_filename">'.
+                                            $fname.'</span>').'</p>';
+                        } else {
+                            $output .= '<p class="LC_error">'.
+                                       &mt('Error: could not update links in [_1].',
+                                       '<span class="LC_filename">'.
+                                       $container.'</span>').'</p>';
+
+                        }
+                    }
+                }
+            }
         } else {
             &logthis('Failed to parse '.$container.
                      ' to modify references: '.$parse_result);
@@ -10763,8 +10927,8 @@ sub process_decompression {
     my ($docudom,$docuname,$file,$destination,$dir_root,$hiddenelem) = @_;
     my ($dir,$error,$warning,$output);
     if ($file !~ /\.(zip|tar|bz2|gz|tar.gz|tar.bz2|tgz)$/) {
-        $error = &mt('File name not a supported archive file type.').
-                 '<br />'.&mt('File name should end with one of: [_1].',
+        $error = &mt('Filename not a supported archive file type.').
+                 '<br />'.&mt('Filename should end with one of: [_1].',
                               '.zip, .tar, .bz2, .gz, .tar.gz, .tar.bz2, .tgz');
     } else {
         my $docuhome = &Apache::lonnet::homeserver($docuname,$docudom);
@@ -11603,7 +11767,7 @@ sub cleanup_empty_dirs {
             my $numitems = 0;
             foreach my $item (@dircontents) {
                 if (-d "$path/$item") {
-                    &recurse_dirs("$path/$item");
+                    &cleanup_empty_dirs("$path/$item");
                     if (-e "$path/$item") {
                         $numitems ++;
                     }
@@ -11650,7 +11814,7 @@ sub get_folder_hierarchy {
                 my @pcs = split(/,/,$pcslist);
                 foreach my $pc (@pcs) {
                     if ($pc == 1) {
-                        push(@pathitems,&mt('Main Course Documents'));
+                        push(@pathitems,&mt('Main Content'));
                     } else {
                         my $res = $navmap->getByMapPc($pc);
                         if (ref($res)) {
@@ -11665,7 +11829,7 @@ sub get_folder_hierarchy {
             }
             if ($showitem) {
                 if ($mapres->{ID} eq '0.0') {
-                    push(@pathitems,&mt('Main Course Documents'));
+                    push(@pathitems,&mt('Main Content'));
                 } else {
                     my $maptitle = $mapres->compTitle();
                     $maptitle =~ s/\W+/_/g;
@@ -13152,7 +13316,7 @@ sub commit_customrole {
 }
 
 sub commit_standardrole {
-    my ($udom,$uname,$url,$three,$start,$end,$one,$two,$sec,$context) = @_;
+    my ($udom,$uname,$url,$three,$start,$end,$one,$two,$sec,$context,$credits) = @_;
     my ($output,$logmsg,$linefeed);
     if ($context eq 'auto') {
         $linefeed = "\n";
@@ -13161,7 +13325,7 @@ sub commit_standardrole {
     }  
     if ($three eq 'st') {
         my $result = &commit_studentrole(\$logmsg,$udom,$uname,$url,$three,$start,$end,
-                                         $one,$two,$sec,$context);
+                                         $one,$two,$sec,$context,$credits);
         if (($result =~ /^error/) || ($result eq 'not_in_class') || 
             ($result eq 'unknown_course') || ($result eq 'refused')) {
             $output = $logmsg.' '.&mt('Error: ').$result."\n"; 
@@ -13192,7 +13356,8 @@ sub commit_standardrole {
 }
 
 sub commit_studentrole {
-    my ($logmsg,$udom,$uname,$url,$three,$start,$end,$one,$two,$sec,$context) = @_;
+    my ($logmsg,$udom,$uname,$url,$three,$start,$end,$one,$two,$sec,$context,
+        $credits) = @_;
     my ($result,$linefeed,$oldsecurl,$newsecurl);
     if ($context eq 'auto') {
         $linefeed = "\n";
@@ -13239,7 +13404,11 @@ sub commit_studentrole {
             }
         }
         if (($expire_role_result eq 'ok') || ($secchange == 0)) {
-            $modify_section_result = &Apache::lonnet::modify_student_enrollment($udom,$uname,undef,undef,undef,undef,undef,$sec,$end,$start,'','',$cid,'',$context);
+            $modify_section_result = 
+                &Apache::lonnet::modify_student_enrollment($udom,$uname,undef,undef,
+                                                           undef,undef,undef,$sec,
+                                                           $end,$start,'','',$cid,
+                                                           '',$context,$credits);
             if ($modify_section_result =~ /^ok/) {
                 if ($secchange == 1) {
                     if ($sec eq '') {
@@ -13296,6 +13465,26 @@ sub commit_studentrole {
     return $result;
 }
 
+sub show_role_extent {
+    my ($scope,$context,$role) = @_;
+    $scope =~ s{^/}{};
+    my @courseroles = &Apache::lonuserutils::roles_by_context('course',1);
+    push(@courseroles,'co');
+    my @authorroles = &Apache::lonuserutils::roles_by_context('author');
+    if (($context eq 'course') || (grep(/^\Q$role\E/,@courseroles))) {
+        $scope =~ s{/}{_};
+        return '<span class="LC_cusr_emph">'.$env{'course.'.$scope.'.description'}.'</span>';
+    } elsif (($context eq 'author') || (grep(/^\Q$role\E/,@authorroles))) {
+        my ($audom,$auname) = split(/\//,$scope);
+        return &mt('[_1] Author Space','<span class="LC_cusr_emph">'.
+                   &Apache::loncommon::plainname($auname,$audom).'</span>');
+    } else {
+        $scope =~ s{/$}{};
+        return &mt('Domain: [_1]','<span class="LC_cusr_emph">'.
+                   &Apache::lonnet::domain($scope,'description').'</span>');
+    }
+}
+
 ############################################################
 ############################################################
 
@@ -13459,6 +13648,7 @@ sub construct_course {
                    'pch.users.denied',
                    'plc.users.denied',
                    'hidefromcat',
+                   'checkforpriv',
                    'categories'],
                    $$crsudom,$$crsunum);
     }
@@ -13488,6 +13678,9 @@ sub construct_course {
     } else {
         $cenv{'internal.courseowner'} = $args->{'curruser'};
     }
+    if ($args->{'defaultcredits'}) {
+        $cenv{'internal.defaultcredits'} = $args->{'defaultcredits'};
+    }
     my @badclasses = (); # Used to accumulate sections/crosslistings that did not pass classlist access check for course owner.
     if ($args->{'crssections'}) {
         $cenv{'internal.sectionnums'} = '';
@@ -13512,6 +13705,11 @@ sub construct_course {
 # do not hide course coordinator from staff listing, 
 # even if privileged
     $cenv{'nothideprivileged'}=$args->{'ccuname'}.':'.$args->{'ccdomain'};
+# add course coordinator's domain to domains to check for privileged users
+# if different to course domain
+    if ($$crsudom ne $args->{'ccdomain'}) {
+        $cenv{'checkforpriv'} = $args->{'ccdomain'};
+    }
 # add crosslistings
     if ($args->{'crsxlist'}) {
         $cenv{'internal.crosslistings'}='';
@@ -14102,6 +14300,32 @@ sub update_content_constraints {
     return;
 }
 
+sub allmaps_incourse {
+    my ($cdom,$cnum,$chome,$cid) = @_;
+    if ($cdom eq '' || $cnum eq '' || $chome eq '' || $cid eq '') {
+        $cid = $env{'request.course.id'};
+        $cdom = $env{'course.'.$cid.'.domain'};
+        $cnum = $env{'course.'.$cid.'.num'};
+        $chome = $env{'course.'.$cid.'.home'};
+    }
+    my %allmaps = ();
+    my $lastchange =
+        &Apache::lonnet::get_coursechange($cdom,$cnum);
+    if ($lastchange > $env{'request.course.tied'}) {
+        my ($furl,$ferr) = &Apache::lonuserstate::readmap("$cdom/$cnum");
+        unless ($ferr) {
+            &update_content_constraints($cdom,$cnum,$chome,$cid);
+        }
+    }
+    my $navmap = Apache::lonnavmaps::navmap->new();
+    if (defined($navmap)) {
+        foreach my $res ($navmap->retrieveResources(undef,sub { $_[0]->is_map() },1,0,1)) {
+            $allmaps{$res->src()} = 1;
+        }
+    }
+    return \%allmaps;
+}
+
 sub parse_supplemental_title {
     my ($title) = @_;
 
@@ -14166,7 +14390,7 @@ sub symb_to_docspath {
         $path =~ s/^\&//;
         my $maptitle = $mapresobj->title();
         if ($mapurl eq 'default') {
-            $maptitle = 'Main Course Documents';
+            $maptitle = 'Main Content';
         }
         $path .= (($path ne '')? '&' : '').
                  &Apache::lonhtmlcommon::entity_encode($mapurl).'&'.
@@ -14180,14 +14404,14 @@ sub symb_to_docspath {
         my $maptitle = &Apache::lonnet::gettitle($mapurl);
         my $ispage = (($type eq 'page')? 1 : '');
         if ($mapurl eq 'default') {
-            $maptitle = 'Main Course Documents';
+            $maptitle = 'Main Content';
         }
         $path = &Apache::lonhtmlcommon::entity_encode($mapurl).'&'.
                 &Apache::lonhtmlcommon::entity_encode($maptitle).':::::'.$ispage;
     }
     unless ($mapurl eq 'default') {
         $path = 'default&'.
-                &Apache::lonhtmlcommon::entity_encode('Main Course Documents').
+                &Apache::lonhtmlcommon::entity_encode('Main Content').
                 ':::::&'.$path;
     }
     return $path;
@@ -14311,7 +14535,7 @@ sub check_captcha {
                       output_folder => $captcha_params{'output_dir'},
                       data_folder   => $captcha_params{'db_dir'},
                   );
-    my $captcha_chk = $captcha->check_code($code,$md5sum);
+    $captcha_chk = $captcha->check_code($code,$md5sum);
     my %captcha_hash = (
                         0       => 'Code not checked (file error)',
                        -1      => 'Failed: code expired',
@@ -14330,7 +14554,7 @@ sub create_recaptcha {
     return $captcha->get_options_setter({theme => 'white'})."\n".
            $captcha->get_html($pubkey).
            &mt('If either word is hard to read, [_1] will replace them.',
-               '<image src="/res/adm/pages/refresh.gif" alt="reCAPTCHA refresh" />').
+               '<img src="/res/adm/pages/refresh.gif" alt="reCAPTCHA refresh" />').
            '<br /><br />';
 }