--- loncom/interface/loncommon.pm	2012/01/31 23:47:15	1.1055
+++ loncom/interface/loncommon.pm	2012/05/28 20:31:17	1.1080
@@ -1,7 +1,7 @@
 # The LearningOnline Network with CAPA
 # a pile of common routines
 #
-# $Id: loncommon.pm,v 1.1055 2012/01/31 23:47:15 raeburn Exp $
+# $Id: loncommon.pm,v 1.1080 2012/05/28 20:31:17 raeburn Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -1374,7 +1374,7 @@ function helpMenu(target) {
     return;
 }
 function writeHelp(caller) {
-    caller.document.writeln('$start_page<frame name="bannerframe"  src="'+banner_link+'" /><frame name="bodyframe" src="$details_link" /> $end_page')
+    caller.document.writeln('$start_page\\n<frame name="bannerframe" src="'+banner_link+'" />\\n<frame name="bodyframe" src="$details_link" />\\n$end_page')
     caller.document.close()
     caller.focus()
 }
@@ -1748,6 +1748,7 @@ Inputs: $workbook
 
 Returns: $format, a hash reference.
 
+
 =cut
 
 ###############################################################
@@ -1980,19 +1981,112 @@ sub select_form {
 # For display filters
 
 sub display_filter {
+    my ($context) = @_;
     if (!$env{'form.show'}) { $env{'form.show'}=10; }
     if (!$env{'form.displayfilter'}) { $env{'form.displayfilter'}='currentfolder'; }
-    return '<span class="LC_nobreak"><label>'.&mt('Records [_1]',
+    my $phraseinput = 'hidden';
+    my $includeinput = 'hidden';
+    my ($checked,$includetypestext);
+    if ($env{'form.displayfilter'} eq 'containing') {
+        $phraseinput = 'text'; 
+        if ($context eq 'parmslog') {
+            $includeinput = 'checkbox';
+            if ($env{'form.includetypes'}) {
+                $checked = ' checked="checked"';
+            }
+            $includetypestext = &mt('Include parameter types');
+        }
+    } else {
+        $includetypestext = '&nbsp;';
+    }
+    my ($additional,$secondid,$thirdid);
+    if ($context eq 'parmslog') {
+        $additional = 
+            '<label><input type="'.$includeinput.'" name="includetypes"'. 
+            $checked.' name="includetypes" value="1" id="includetypes" />'.
+            '&nbsp;<span id="includetypestext">'.$includetypestext.'</span>'.
+            '</label>';
+        $secondid = 'includetypes';
+        $thirdid = 'includetypestext';
+    }
+    my $onchange = "javascript:toggleHistoryOptions(this,'containingphrase','$context',
+                                                    '$secondid','$thirdid')";
+    return '<span class="LC_nobreak"><label>'.&mt('Records: [_1]',
 			       &Apache::lonmeta::selectbox('show',$env{'form.show'},undef,
 							   (&mt('all'),10,20,50,100,1000,10000))).
 	   '</label></span> <span class="LC_nobreak">'.
-           &mt('Filter [_1]',
+           &mt('Filter: [_1]',
 	   &select_form($env{'form.displayfilter'},
 			'displayfilter',
 			{'currentfolder' => 'Current folder/page',
 			 'containing' => 'Containing phrase',
-			 'none' => 'None'})).
-			 '<input type="text" name="containingphrase" size="30" value="'.&HTML::Entities::encode($env{'form.containingphrase'}).'" /></span>';
+			 'none' => 'None'},$onchange)).'&nbsp;'.
+			 '<input type="'.$phraseinput.'" name="containingphrase" id="containingphrase" size="30" value="'.
+                         &HTML::Entities::encode($env{'form.containingphrase'}).
+                         '" />'.$additional;
+}
+
+sub display_filter_js {
+    my $includetext = &mt('Include parameter types');
+    return <<"ENDJS";
+  
+function toggleHistoryOptions(setter,firstid,context,secondid,thirdid) {
+    var firstType = 'hidden';
+    if (setter.options[setter.selectedIndex].value == 'containing') {
+        firstType = 'text';
+    }
+    firstObject = document.getElementById(firstid);
+    if (typeof(firstObject) == 'object') {
+        if (firstObject.type != firstType) {
+            changeInputType(firstObject,firstType);
+        }
+    }
+    if (context == 'parmslog') {
+        var secondType = 'hidden';
+        if (firstType == 'text') {
+            secondType = 'checkbox';
+        }
+        secondObject = document.getElementById(secondid);  
+        if (typeof(secondObject) == 'object') {
+            if (secondObject.type != secondType) {
+                changeInputType(secondObject,secondType);
+            }
+        }
+        var textItem = document.getElementById(thirdid);
+        var currtext = textItem.innerHTML;
+        var newtext;
+        if (firstType == 'text') {
+            newtext = '$includetext';
+        } else {
+            newtext = '&nbsp;';
+        }
+        if (currtext != newtext) {
+            textItem.innerHTML = newtext;
+        }
+    }
+    return;
+}
+
+function changeInputType(oldObject,newType) {
+    var newObject = document.createElement('input');
+    newObject.type = newType;
+    if (oldObject.size) {
+        newObject.size = oldObject.size;
+    }
+    if (oldObject.value) {
+        newObject.value = oldObject.value;
+    }
+    if (oldObject.name) {
+        newObject.name = oldObject.name;
+    }
+    if (oldObject.id) {
+        newObject.id = oldObject.id;
+    }
+    oldObject.parentNode.replaceChild(newObject,oldObject);
+    return;
+}
+
+ENDJS
 }
 
 sub gradeleveldescription {
@@ -2856,6 +2950,7 @@ database which holds them.
 
 Uses global $thesaurus_db_file.
 
+
 =cut
 
 ###############################################################
@@ -3127,12 +3222,12 @@ sub noteswrapper {
 # ------------------------------------------------------------- Aboutme Wrapper
 
 sub aboutmewrapper {
-    my ($link,$username,$domain,$target)=@_;
+    my ($link,$username,$domain,$target,$class)=@_;
     if (!defined($username)  && !defined($domain)) {
         return;
     }
     return '<a href="/adm/'.$domain.'/'.$username.'/aboutme?forcestudent=1"'.
-	($target?' target="$target"':'').' title="'.&mt("View this user's personal information page").'">'.$link.'</a>';
+	($target?' target="'.$target.'"':'').($class?' class="'.$class.'"':'').' title="'.&mt("View this user's personal information page").'">'.$link.'</a>';
 }
 
 # ------------------------------------------------------------ Syllabus Wrapper
@@ -3988,9 +4083,7 @@ sub findallcourses {
         $udom = $env{'user.domain'};
     }
     if (($uname ne $env{'user.name'}) || ($udom ne $env{'user.domain'})) {
-        my $extra = &Apache::lonnet::freeze_escape({'skipcheck' => 1});
-        my %roleshash = &Apache::lonnet::dump('roles',$udom,$uname,'.',undef,
-                                              $extra);
+        my %roleshash = &Apache::lonnet::dump('roles',$udom,$uname);
         if (!%roles) {
             %roles = (
                        cc => 1,
@@ -4015,18 +4108,25 @@ sub findallcourses {
             if ($tstart) {
                 next if ($tstart > $now);
             }
-            my ($cdom,$cnum,$sec,$cnumpart,$secpart,$role,$realsec);
+            my ($cdom,$cnum,$sec,$cnumpart,$secpart,$role);
             (undef,$cdom,$cnumpart,$secpart) = split(/\//,$entry);
+            my $value = $trole.'/'.$cdom.'/';
             if ($secpart eq '') {
                 ($cnum,$role) = split(/_/,$cnumpart); 
                 $sec = 'none';
-                $realsec = '';
+                $value .= $cnum.'/';
             } else {
                 $cnum = $cnumpart;
                 ($sec,$role) = split(/_/,$secpart);
-                $realsec = $sec;
+                $value .= $cnum.'/'.$sec;
+            }
+            if (ref($courses{$cdom.'_'.$cnum}{$sec}) eq 'ARRAY') {
+                unless (grep(/^\Q$value\E$/,@{$courses{$cdom.'_'.$cnum}{$sec}})) {
+                    push(@{$courses{$cdom.'_'.$cnum}{$sec}},$value);
+                }
+            } else {
+                @{$courses{$cdom.'_'.$cnum}{$sec}} = ($value);
             }
-            $courses{$cdom.'_'.$cnum}{$sec} = $trole.'/'.$cdom.'/'.$cnum.'/'.$realsec;
         }
     } else {
         foreach my $key (keys(%env)) {
@@ -4044,11 +4144,19 @@ sub findallcourses {
                     if ($now>$endtime) { $active=0; }
                 }
                 if ($active) {
+                    my $value = $role.'/'.$cdom.'/'.$cnum.'/';
                     if ($sec eq '') {
                         $sec = 'none';
+                    } else {
+                        $value .= $sec;
+                    }
+                    if (ref($courses{$cdom.'_'.$cnum}{$sec}) eq 'ARRAY') {
+                        unless (grep(/^\Q$value\E$/,@{$courses{$cdom.'_'.$cnum}{$sec}})) {
+                            push(@{$courses{$cdom.'_'.$cnum}{$sec}},$value);
+                        }
+                    } else {
+                        @{$courses{$cdom.'_'.$cnum}{$sec}} = ($value);
                     }
-                    $courses{$cdom.'_'.$cnum}{$sec} = 
-                                     $role.'/'.$cdom.'/'.$cnum.'/'.$sec;
                 }
             }
         }
@@ -4059,7 +4167,7 @@ sub findallcourses {
 ###############################################
 
 sub blockcheck {
-    my ($setters,$activity,$uname,$udom) = @_;
+    my ($setters,$activity,$uname,$udom,$url) = @_;
 
     if (!defined($udom)) {
         $udom = $env{'user.domain'};
@@ -4071,13 +4179,14 @@ sub blockcheck {
     # If uname and udom are for a course, check for blocks in the course.
 
     if (&Apache::lonnet::is_course($udom,$uname)) {
-        my %records = &Apache::lonnet::dump('comm_block',$udom,$uname);
-        my ($startblock,$endblock)=&get_blocks($setters,$activity,$udom,$uname);
-        return ($startblock,$endblock);
+        my ($startblock,$endblock,$triggerblock) = 
+            &get_blocks($setters,$activity,$udom,$uname,$url);
+        return ($startblock,$endblock,$triggerblock);
     }
 
     my $startblock = 0;
     my $endblock = 0;
+    my $triggerblock = '';
     my %live_courses = &findallcourses(undef,$uname,$udom);
 
     # If uname is for a user, and activity is course-specific, i.e.,
@@ -4141,34 +4250,38 @@ sub blockcheck {
             if ($otheruser) {
                 # Resource belongs to user other than current user.
                 # Assemble privs for that user, and check for 'evb' priv.
-                my ($trole,$tdom,$tnum,$tsec);
-                my $entry = $live_courses{$course}{$sec};
-                if ($entry =~ /^cr/) {
-                    ($trole,$tdom,$tnum,$tsec) = 
-                      ($entry =~ m|^(cr/$match_domain/$match_username/\w+)\./($match_domain)/($match_username)/?(\w*)$|);
-                } else {
-                    ($trole,$tdom,$tnum,$tsec) = split(/\//,$entry);
-                }
-                my ($spec,$area,$trest,%allroles,%userroles);
-                $area = '/'.$tdom.'/'.$tnum;
-                $trest = $tnum;
-                if ($tsec ne '') {
-                    $area .= '/'.$tsec;
-                    $trest .= '/'.$tsec;
-                }
-                $spec = $trole.'.'.$area;
-                if ($trole =~ /^cr/) {
-                    &Apache::lonnet::custom_roleprivs(\%allroles,$trole,
-                                                      $tdom,$spec,$trest,$area);
-                } else {
-                    &Apache::lonnet::standard_roleprivs(\%allroles,$trole,
-                                                       $tdom,$spec,$trest,$area);
-                }
-                my ($author,$adv) = &Apache::lonnet::set_userprivs(\%userroles,\%allroles);
-                if ($userroles{'user.priv.'.$checkrole} =~ /evb\&([^\:]*)/) {
-                    if ($1) {
-                        $no_userblock = 1;
-                        last;
+                my (%allroles,%userroles);
+                if (ref($live_courses{$course}{$sec}) eq 'ARRAY') {
+                    foreach my $entry (@{$live_courses{$course}{$sec}}) { 
+                        my ($trole,$tdom,$tnum,$tsec);
+                        if ($entry =~ /^cr/) {
+                            ($trole,$tdom,$tnum,$tsec) = 
+                                ($entry =~ m|^(cr/$match_domain/$match_username/\w+)\./($match_domain)/($match_username)/?(\w*)$|);
+                        } else {
+                           ($trole,$tdom,$tnum,$tsec) = split(/\//,$entry);
+                        }
+                        my ($spec,$area,$trest);
+                        $area = '/'.$tdom.'/'.$tnum;
+                        $trest = $tnum;
+                        if ($tsec ne '') {
+                            $area .= '/'.$tsec;
+                            $trest .= '/'.$tsec;
+                        }
+                        $spec = $trole.'.'.$area;
+                        if ($trole =~ /^cr/) {
+                            &Apache::lonnet::custom_roleprivs(\%allroles,$trole,
+                                                              $tdom,$spec,$trest,$area);
+                        } else {
+                            &Apache::lonnet::standard_roleprivs(\%allroles,$trole,
+                                                                $tdom,$spec,$trest,$area);
+                        }
+                    }
+                    my ($author,$adv) = &Apache::lonnet::set_userprivs(\%userroles,\%allroles);
+                    if ($userroles{'user.priv.'.$checkrole} =~ /evb\&([^\:]*)/) {
+                        if ($1) {
+                            $no_userblock = 1;
+                            last;
+                        }
                     }
                 }
             } else {
@@ -4188,46 +4301,139 @@ sub blockcheck {
         # Retrieve blocking times and identity of locker for course
         # of specified user, unless user has 'evb' privilege.
         
-        my ($start,$end)=&get_blocks($setters,$activity,$cdom,$cnum);
+        my ($start,$end,$trigger) = 
+            &get_blocks($setters,$activity,$cdom,$cnum,$url);
         if (($start != 0) && 
             (($startblock == 0) || ($startblock > $start))) {
             $startblock = $start;
+            if ($trigger ne '') {
+                $triggerblock = $trigger;
+            }
         }
         if (($end != 0)  &&
             (($endblock == 0) || ($endblock < $end))) {
             $endblock = $end;
+            if ($trigger ne '') {
+                $triggerblock = $trigger;
+            }
         }
     }
-    return ($startblock,$endblock);
+    return ($startblock,$endblock,$triggerblock);
 }
 
 sub get_blocks {
-    my ($setters,$activity,$cdom,$cnum) = @_;
+    my ($setters,$activity,$cdom,$cnum,$url) = @_;
     my $startblock = 0;
     my $endblock = 0;
+    my $triggerblock = '';
     my $course = $cdom.'_'.$cnum;
     $setters->{$course} = {};
     $setters->{$course}{'staff'} = [];
     $setters->{$course}{'times'} = [];
-    my %records = &Apache::lonnet::dump('comm_block',$cdom,$cnum);
-    foreach my $record (keys(%records)) {
-        my ($start,$end) = ($record =~ m/^(\d+)____(\d+)$/);
-        if ($start <= time && $end >= time) {
-            my ($staff_name,$staff_dom,$title,$blocks) =
-                &parse_block_record($records{$record});
-            if ($blocks->{$activity} eq 'on') {
-                push(@{$$setters{$course}{'staff'}},[$staff_name,$staff_dom]);
-                push(@{$$setters{$course}{'times'}}, [$start,$end]);
-                if ( ($startblock == 0) || ($startblock > $start) ) {
-                    $startblock = $start;
+    $setters->{$course}{'triggers'} = [];
+    my (@blockers,%triggered);
+    my $now = time;
+    my %commblocks = &Apache::lonnet::get_comm_blocks($cdom,$cnum);
+    if ($activity eq 'docs') {
+        @blockers = &Apache::lonnet::has_comm_blocking('bre',undef,$url,\%commblocks);
+        foreach my $block (@blockers) {
+            if ($block =~ /^firstaccess____(.+)$/) {
+                my $item = $1;
+                my $type = 'map';
+                my $timersymb = $item;
+                if ($item eq 'course') {
+                    $type = 'course';
+                } elsif ($item =~ /___\d+___/) {
+                    $type = 'resource';
+                } else {
+                    $timersymb = &Apache::lonnet::symbread($item);
                 }
-                if ( ($endblock == 0) || ($endblock < $end) ) {
-                    $endblock = $end;
+                my $start = $env{'course.'.$cdom.'_'.$cnum.'.firstaccess.'.$timersymb};
+                my $end = $start + $env{'course.'.$cdom.'_'.$cnum.'.timerinterval.'.$timersymb};
+                $triggered{$block} = {
+                                       start => $start,
+                                       end   => $end,
+                                       type  => $type,
+                                     };
+            }
+        }
+    } else {
+        foreach my $block (keys(%commblocks)) {
+            if ($block =~ m/^(\d+)____(\d+)$/) { 
+                my ($start,$end) = ($1,$2);
+                if ($start <= time && $end >= time) {
+                    if (ref($commblocks{$block}) eq 'HASH') {
+                        if (ref($commblocks{$block}{'blocks'}) eq 'HASH') {
+                            if ($commblocks{$block}{'blocks'}{$activity} eq 'on') {
+                                unless(grep(/^\Q$block\E$/,@blockers)) {
+                                    push(@blockers,$block);
+                                }
+                            }
+                        }
+                    }
+                }
+            } elsif ($block =~ /^firstaccess____(.+)$/) {
+                my $item = $1;
+                my $timersymb = $item; 
+                my $type = 'map';
+                if ($item eq 'course') {
+                    $type = 'course';
+                } elsif ($item =~ /___\d+___/) {
+                    $type = 'resource';
+                } else {
+                    $timersymb = &Apache::lonnet::symbread($item);
                 }
+                my $start = $env{'course.'.$cdom.'_'.$cnum.'.firstaccess.'.$timersymb};
+                my $end = $start + $env{'course.'.$cdom.'_'.$cnum.'.timerinterval.'.$timersymb}; 
+                if ($start && $end) {
+                    if (($start <= time) && ($end >= time)) {
+                        unless (grep(/^\Q$block\E$/,@blockers)) {
+                            push(@blockers,$block);
+                            $triggered{$block} = {
+                                                   start => $start,
+                                                   end   => $end,
+                                                   type  => $type,
+                                                 };
+                        }
+                    }
+                }
+            }
+        }
+    }
+    foreach my $blocker (@blockers) {
+        my ($staff_name,$staff_dom,$title,$blocks) =
+            &parse_block_record($commblocks{$blocker});
+        push(@{$$setters{$course}{'staff'}},[$staff_name,$staff_dom]);
+        my ($start,$end,$triggertype);
+        if ($blocker =~ m/^(\d+)____(\d+)$/) {
+            ($start,$end) = ($1,$2);
+        } elsif (ref($triggered{$blocker}) eq 'HASH') {
+            $start = $triggered{$blocker}{'start'};
+            $end = $triggered{$blocker}{'end'};
+            $triggertype = $triggered{$blocker}{'type'};
+        }
+        if ($start) {
+            push(@{$$setters{$course}{'times'}}, [$start,$end]);
+            if ($triggertype) {
+                push(@{$$setters{$course}{'triggers'}},$triggertype);
+            } else {
+                push(@{$$setters{$course}{'triggers'}},0);
+            }
+            if ( ($startblock == 0) || ($startblock > $start) ) {
+                $startblock = $start;
+                if ($triggertype) {
+                    $triggerblock = $blocker;
+                }
+            }
+            if ( ($endblock == 0) || ($endblock < $end) ) {
+               $endblock = $end;
+               if ($triggertype) {
+                   $triggerblock = $blocker;
+               }
             }
         }
     }
-    return ($startblock,$endblock);
+    return ($startblock,$endblock,$triggerblock);
 }
 
 sub parse_block_record {
@@ -4251,39 +4457,50 @@ sub parse_block_record {
 }
 
 sub blocking_status {
-  my ($activity,$uname,$udom) = @_;
-  my %setters;
+    my ($activity,$uname,$udom,$url) = @_;
+    my %setters;
 
-  # check for active blocking
-  my ($startblock,$endblock)=&blockcheck(\%setters,$activity,$uname,$udom);
-
-  my $blocked = $startblock && $endblock ? 1 : 0;
-
-  # caller just wants to know whether a block is active
-  if (!wantarray) { return $blocked; }
-
-  # build a link to a popup window containing the details
-  my $querystring  = "?activity=$activity";
-  # $uname and $udom decide whose portfolio the user is trying to look at
-     $querystring .= "&amp;udom=$udom"      if $udom;
-     $querystring .= "&amp;uname=$uname"    if $uname;
-
-  my $output .= <<'END_MYBLOCK';
-    function openWindow(url, wdwName, w, h, toolbar,scrollbar) {
-        var options = "width=" + w + ",height=" + h + ",";
-        options += "resizable=yes,scrollbars="+scrollbar+",status=no,";
-        options += "menubar=no,toolbar="+toolbar+",location=no,directories=no";
-        var newWin = window.open(url, wdwName, options);
-        newWin.focus();
-    }
+# check for active blocking
+    my ($startblock,$endblock,$triggerblock) = 
+        &blockcheck(\%setters,$activity,$uname,$udom,$url);
+    my $blocked = 0;
+    if ($startblock && $endblock) {
+        $blocked = 1;
+    }
+
+# caller just wants to know whether a block is active
+    if (!wantarray) { return $blocked; }
+
+# build a link to a popup window containing the details
+    my $querystring  = "?activity=$activity";
+# $uname and $udom decide whose portfolio the user is trying to look at
+    if ($activity eq 'port') {
+        $querystring .= "&amp;udom=$udom"      if $udom;
+        $querystring .= "&amp;uname=$uname"    if $uname;
+    } elsif ($activity eq 'docs') {
+        $querystring .= '&amp;url='.&HTML::Entities::encode($url,'&"');
+    }
+
+    my $output .= <<'END_MYBLOCK';
+function openWindow(url, wdwName, w, h, toolbar,scrollbar) {
+    var options = "width=" + w + ",height=" + h + ",";
+    options += "resizable=yes,scrollbars="+scrollbar+",status=no,";
+    options += "menubar=no,toolbar="+toolbar+",location=no,directories=no";
+    var newWin = window.open(url, wdwName, options);
+    newWin.focus();
+}
 END_MYBLOCK
 
-  $output = Apache::lonhtmlcommon::scripttag($output);
+    $output = Apache::lonhtmlcommon::scripttag($output);
   
-  my $popupUrl = "/adm/blockingstatus/$querystring";
-  my $text = mt('Communication Blocked');
-
-  $output .= <<"END_BLOCK";
+    my $popupUrl = "/adm/blockingstatus/$querystring";
+    my $text = &mt('Communication Blocked');
+    if ($activity eq 'docs') {
+        $text = &mt('Content Access Blocked');
+    } elsif ($activity eq 'printout') {
+        $text = &mt('Printing Blocked');
+    }
+    $output .= <<"END_BLOCK";
 <div class='LC_comblock'>
   <a onclick='openWindow("$popupUrl","Blocking Table",600,300,"no","no");return false;' href='/adm/blockingstatus/$querystring'
   title='$text'>
@@ -4294,7 +4511,7 @@ END_MYBLOCK
 
 END_BLOCK
 
-  return ($blocked, $output);
+    return ($blocked, $output);
 }
 
 ###############################################
@@ -4811,7 +5028,8 @@ sub bodytag {
     if ($public) {
 	undef($role);
     } else {
-	$name = &aboutmewrapper($name,$env{'user.name'},$env{'user.domain'});
+	$name = &aboutmewrapper($name,$env{'user.name'},$env{'user.domain'},
+                                undef,'LC_menubuttons_link');
     }
     
     my $titleinfo = '<h1>'.$title.'</h1>';
@@ -4888,7 +5106,7 @@ sub bodytag {
 sub dc_courseid_toggle {
     my ($dc_info) = @_;
     return ' <span id="dccidtext" class="LC_cusr_subheading LC_nobreak">'.
-           '<a href="javascript:showCourseID();">'.
+           '<a href="javascript:showCourseID();" class="LC_menubuttons_link">'.
            &mt('(More ...)').'</a></span>'.
            '<div id="dccid" class="LC_dccid">'.$dc_info.'</div>';
 }
@@ -4945,7 +5163,10 @@ i.e., $env{'internal.head.redirect'} exi
 
 sub endbodytag {
     my ($args) = @_;
-    my $endbodytag='</body>';
+    my $endbodytag;
+    unless ((ref($args) eq 'HASH') && ($args->{'notbody'})) {
+        $endbodytag='</body>';
+    }
     $endbodytag=&Apache::lontexconvert::jsMath_process()."\n".$endbodytag;
     if ( exists( $env{'internal.head.redirect'} ) ) {
         if (!(ref($args) eq 'HASH' && $args->{'noredirectlink'})) {
@@ -4993,7 +5214,7 @@ sub standard_css {
     my $mono                 = 'monospace';
     my $data_table_head      = $sidebg;
     my $data_table_light     = '#FAFAFA';
-    my $data_table_dark      = '#F0F0F0';
+    my $data_table_dark      = '#E0E0E0';
     my $data_table_darker    = '#CCCCCC';
     my $data_table_highlight = '#FFFF00';
     my $mail_new             = '#FFBB77';
@@ -6080,6 +6301,7 @@ div.LC_edit_problem_footer {
   font-weight: normal;
   font-size:  medium;
   margin: 2px;
+  background-color: $sidebg;
 }
 
 div.LC_edit_problem_header,
@@ -6096,6 +6318,7 @@ div.LC_edit_problem_header_title {
   font-size: larger;
   background: $tabbg;
   padding: 3px;
+  margin: 0 0 5px 0;
 }
 
 table.LC_edit_problem_header_title {
@@ -6226,6 +6449,7 @@ fieldset > legend {
 ol.LC_primary_menu {
   float: right;
   margin: 0;
+  padding: 0;
   background-color: $pgbg_or_bgcolor;
 }
 
@@ -6234,14 +6458,55 @@ ol#LC_PathBreadcrumbs {
 }
 
 ol.LC_primary_menu li {
-  display: inline;
-  padding: 5px 5px 0 10px;
+  color: RGB(80, 80, 80);
+  vertical-align: middle;
+  text-align: left;
+  list-style: none;
+  float: left;
+}
+
+ol.LC_primary_menu li a {
+  display: block;
+  margin: 0;
+  padding: 0 5px 0 10px;
+  text-decoration: none;
+}
+
+ol.LC_primary_menu li ul {
+  display: none;
+  width: 10em;
+  background-color: $data_table_light;
+}
+
+ol.LC_primary_menu li:hover ul, ol.LC_primary_menu li.hover ul {
+  display: block;
+  position: absolute;
+  margin: 0;
+  padding: 0;
+  z-index: 2;
+}
+
+ol.LC_primary_menu li:hover li, ol.LC_primary_menu li.hover li {
+  font-size: 90%;
   vertical-align: top;
+  float: none;
+  border-left: 1px solid black;
+  border-right: 1px solid black;
+}
+
+ol.LC_primary_menu li:hover li a, ol.LC_primary_menu li.hover li a {
+  background-color:$data_table_light;
+}
+
+ol.LC_primary_menu li li a:hover {
+   color:$button_hover;
+   background-color:$data_table_dark;
 }
 
 ol.LC_primary_menu li img {
   vertical-align: bottom;
   height: 1.1em;
+  margin: 0.2em 0 0 0;
 }
 
 ol.LC_primary_menu a {
@@ -6788,6 +7053,8 @@ sub headtag {
 	'<head>'.
 	&font_settings();
 
+    my $inhibitprint = &print_suppression();
+
     if (!$args->{'frameset'}) {
 	$result .= &Apache::lonhtmlcommon::htmlareaheaders();
     }
@@ -6833,6 +7100,7 @@ ADDMETA
     if (!$args->{'no_auto_mt_title'}) { $title = &mt($title); }
     $result .= '<title> LON-CAPA '.$title.'</title>'
 	.'<link rel="stylesheet" type="text/css" href="'.$url.'" />'
+        .$inhibitprint
 	.$head_extra;
     return $result.'</head>';
 }
@@ -6858,6 +7126,82 @@ sub font_settings {
 
 =pod
 
+=item * &print_suppression()
+
+In course context returns css which causes the body to be blank when media="print",
+if printout generation is unavailable for the current resource.
+
+This could be because:
+
+(a) printstartdate is in the future
+
+(b) printenddate is in the past
+
+(c) there is an active exam block with "printout"
+functionality blocked
+
+Users with pav, pfo or evb privileges are exempt.
+
+Inputs: none
+
+=cut
+
+
+sub print_suppression {
+    my $noprint;
+    if ($env{'request.course.id'}) {
+        my $scope = $env{'request.course.id'};
+        if ((&Apache::lonnet::allowed('pav',$scope)) ||
+            (&Apache::lonnet::allowed('pfo',$scope))) {
+            return;
+        }
+        if ($env{'request.course.sec'} ne '') {
+            $scope .= "/$env{'request.course.sec'}";
+            if ((&Apache::lonnet::allowed('pav',$scope)) ||
+                (&Apache::lonnet::allowed('pfo',$scope))) {
+                return;
+            }
+        }
+        my $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+        my $cnum = $env{'course.'.$env{'request.course.id'}.'.num'};
+        my $blocked = &blocking_status('printout',$cnum,$cdom);
+        if ($blocked) {
+            my $checkrole = "cm./$cdom/$cnum";
+            if ($env{'request.course.sec'} ne '') {
+                $checkrole .= "/$env{'request.course.sec'}";
+            }
+            unless ((&Apache::lonnet::allowed('evb',undef,undef,$checkrole)) &&
+                    ($env{'request.role'} !~ m{^st\./$cdom/$cnum})) {
+                $noprint = 1;
+            }
+        }
+        unless ($noprint) {
+            my $symb = &Apache::lonnet::symbread();
+            if ($symb ne '') {
+                my $navmap = Apache::lonnavmaps::navmap->new();
+                if (ref($navmap)) {
+                    my $res = $navmap->getBySymb($symb);
+                    if (ref($res)) {
+                        if (!$res->resprintable()) {
+                            $noprint = 1;
+                        }
+                    }
+                }
+            }
+        }
+        if ($noprint) {
+            return <<"ENDSTYLE";
+<style type="text/css" media="print">
+    body { display:none }
+</style>
+ENDSTYLE
+        }
+    }
+    return;
+}
+
+=pod
+
 =item * &xml_begin()
 
 Returns the needed doctype and <html>
@@ -7016,7 +7360,9 @@ sub end_page {
     } else {
 	$result .= &endbodytag($args);
     }
-    $result .= "\n</html>";
+    unless ($args->{'notbody'}) {
+        $result .= "\n</html>";
+    }
 
     if ($args->{'js_ready'}) {
 	$result = &js_ready($result);
@@ -7101,8 +7447,14 @@ sub modal_link {
     unless ($width) { $width=480; }
     unless ($height) { $height=400; }
     unless ($scrolling) { $scrolling='yes'; }
-    return '<a href="'.$link.'" target="'.$target.'" title="'.$title.'" onclick="openMyModal(\''.$link.'\','.$width.','.$height.',\''.$scrolling.'\'); return false;">'.
-           $linktext.'</a>';
+    my $target_attr;
+    if (defined($target)) {
+        $target_attr = 'target="'.$target.'"';
+    }
+    return <<"ENDLINK";
+<a href="$link" $target_attr title="$title" onclick="javascript:openMyModal('$link',$width,$height,'$scrolling'); return false;">
+           $linktext</a>
+ENDLINK
 }
 
 sub modal_adhoc_script {
@@ -7350,16 +7702,21 @@ sub validate_page {
 
 
 sub start_scrollbox {
-    my ($outerwidth,$width,$height,$id)=@_;
+    my ($outerwidth,$width,$height,$id,$bgcolor)=@_;
     unless ($outerwidth) { $outerwidth='520px'; }
     unless ($width) { $width='500px'; }
     unless ($height) { $height='200px'; }
-    my ($table_id,$div_id);
+    my ($table_id,$div_id,$tdcol);
     if ($id ne '') {
         $table_id = " id='table_$id'";
         $div_id = " id='div_$id'";
     }
-    return "<table style='width: $outerwidth; border: 1px solid none;'$table_id><tr><td style='width: $width;' bgcolor='#FFFFFF'><div style='overflow:auto; width:$width; height: $height;'$div_id>";
+    if ($bgcolor ne '') {
+        $tdcol = "background-color: $bgcolor;";
+    }
+    return <<"END";
+<table style="width: $outerwidth; border: 1px solid none;"$table_id><tr><td style="width: $width;$tdcol"><div style="overflow:auto; width:$width; height: $height;"$div_id>
+END
 }
 
 sub end_scrollbox {
@@ -7585,8 +7942,7 @@ role status: active, previous or future.
 
 sub check_user_status {
     my ($udom,$uname,$cdom,$crs,$role,$sec) = @_;
-    my $extra = &Apache::lonnet::freeze_escape({'skipcheck' => 1});
-    my %userinfo = &Apache::lonnet::dump('roles',$udom,$uname,'.',undef,$extra);
+    my %userinfo = &Apache::lonnet::dump('roles',$udom,$uname);
     my @uroles = keys %userinfo;
     my $srchstr;
     my $active_chk = 'none';
@@ -8817,6 +9173,8 @@ sub get_future_slots {
 
 =pod
 
+=back
+
 =head1 HTTP Helpers
 
 =over 4
@@ -8955,13 +9313,20 @@ sub get_env_multiple {
 
 sub ask_for_embedded_content {
     my ($actionurl,$state,$allfiles,$codebase,$args)=@_;
-    my (%subdependencies,%dependencies,%mapping,%existing,%newfiles,%pathchanges);
-    my $num = 0;
+    my (%subdependencies,%dependencies,%mapping,%existing,%newfiles,%pathchanges,
+        %currsubfile,%unused);
+    my $counter = 0;
+    my $numnew = 0;
     my $numremref = 0;
     my $numinvalid = 0;
     my $numpathchg = 0;
     my $numexisting = 0;
-    my ($output,$upload_output,$toplevel,$url,$udom,$uname,$getpropath);
+    my $numunused = 0;
+    my ($output,$upload_output,$toplevel,$url,$udom,$uname,$getpropath,$cdom,$cnum,
+        $fileloc,$filename,$delete_output,$modify_output,$title,$symb,$path);
+    my $heading = &mt('Upload embedded files');
+    my $buttontext = &mt('Upload');
+
     if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) {
         my $current_path='/';
         if ($env{'form.currentpath'}) {
@@ -8989,8 +9354,24 @@ sub ask_for_embedded_content {
         }
     } elsif ($actionurl eq '/adm/coursedocs') {
         if (ref($args) eq 'HASH') {
-           $url = $args->{'docs_url'};
-           $toplevel = $url;
+            $url = $args->{'docs_url'};
+            $toplevel = $url;
+        }
+    } elsif ($actionurl eq '/adm/dependencies') {
+        if ($env{'request.course.id'} ne '') {
+            $cdom = $env{'course.'.$env{'request.course.id'}.'.domain'};
+            $cnum =  $env{'course.'.$env{'request.course.id'}.'.num'};
+            if (ref($args) eq 'HASH') {
+                $url = $args->{'docs_url'};
+                $title = $args->{'docs_title'};
+                $toplevel = "/$url";
+                ($path) =  
+                    ($toplevel =~ m{^(\Q/uploaded/$cdom/$cnum/\E(?:docs|supplemental)/(?:default|\d+)/\d+)/});
+                $fileloc = &Apache::lonnet::filelocation('',$toplevel);
+                $fileloc =~ s{^/}{};
+                ($filename) = ($fileloc =~ m{.+/([^/]+)$});
+                $heading = &mt('Status of dependencies in [_1]',"$title ($filename)");
+            }
         }
     }
     my $now = time();
@@ -9029,25 +9410,44 @@ sub ask_for_embedded_content {
             }
         }
     }
+    my $dirptr = 16384;
     foreach my $path (keys(%subdependencies)) {
-        my %currsubfile;
+        $currsubfile{$path} = {};
         if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) { 
             my ($sublistref,$listerror) =
                 &Apache::lonnet::dirlist($url.$path,$udom,$uname,$getpropath);
             if (ref($sublistref) eq 'ARRAY') {
                 foreach my $line (@{$sublistref}) {
                     my ($file_name,$rest) = split(/\&/,$line,2);
-                    $currsubfile{$file_name} = 1;
+                    $currsubfile{$path}{$file_name} = 1;
                 }
             }
         } elsif (($actionurl eq '/adm/upload') || ($actionurl eq '/adm/testbank')) {
             if (opendir(my $dir,$url.'/'.$path)) {
                 my @subdir_list = grep(!/^\./,readdir($dir));
-                map {$currsubfile{$_} = 1;} @subdir_list;
+                map {$currsubfile{$path}{$_} = 1;} @subdir_list;
+            }
+        } elsif ($actionurl eq '/adm/dependencies') {
+            if ($env{'request.course.id'} ne '') {
+                my ($dir) = ($fileloc =~ m{^(.+/)[^/]+$});
+                if ($dir ne '') {
+                    my ($sublistref,$listerror) =
+                        &Apache::lonnet::dirlist($dir.$path,$cdom,$cnum,$getpropath,undef,'/');
+                    if (ref($sublistref) eq 'ARRAY') {
+                        foreach my $line (@{$sublistref}) {
+                            my ($file_name,$dom,undef,$testdir,undef,undef,undef,undef,$size,
+                                undef,$mtime)=split(/\&/,$line,12);
+                            unless (($testdir&$dirptr) ||
+                                    ($file_name =~ /^\.\.?$/)) {
+                                $currsubfile{$path}{$file_name} = [$size,$mtime];
+                            }
+                        }
+                    }
+                }
             }
         }
         foreach my $file (keys(%{$subdependencies{$path}})) {
-            if ($currsubfile{$file}) {
+            if (exists($currsubfile{$path}{$file})) {
                 my $item = $path.'/'.$file;
                 unless ($mapping{$item} eq $item) {
                     $pathchanges{$item} = 1;
@@ -9058,6 +9458,17 @@ sub ask_for_embedded_content {
                 $newfiles{$path.'/'.$file} = 1;
             }
         }
+        if ($actionurl eq '/adm/dependencies') {
+            foreach my $path (keys(%currsubfile)) {
+                if (ref($currsubfile{$path}) eq 'HASH') {
+                    foreach my $file (keys(%{$currsubfile{$path}})) {
+                         unless ($subdependencies{$path}{$file}) {
+                             $unused{$path.'/'.$file} = 1; 
+                         }
+                    }
+                }
+            }
+        }
     }
     my %currfile;
     if (($actionurl eq '/adm/portfolio') || ($actionurl eq '/adm/coursegrp_portfolio')) {
@@ -9074,9 +9485,27 @@ sub ask_for_embedded_content {
             my @dir_list = grep(!/^\./,readdir($dir));
             map {$currfile{$_} = 1;} @dir_list;
         }
+    } elsif ($actionurl eq '/adm/dependencies') {
+        if ($env{'request.course.id'} ne '') {
+            my ($dir) = ($fileloc =~ m{^(.+/)[^/]+$});
+            if ($dir ne '') {
+                my ($dirlistref,$listerror) =
+                    &Apache::lonnet::dirlist($dir,$cdom,$cnum,$getpropath,undef,'/');
+                if (ref($dirlistref) eq 'ARRAY') {
+                    foreach my $line (@{$dirlistref}) {
+                        my ($file_name,$dom,undef,$testdir,undef,undef,undef,undef,
+                            $size,undef,$mtime)=split(/\&/,$line,12);
+                        unless (($testdir&$dirptr) ||
+                                ($file_name =~ /^\.\.?$/)) {
+                            $currfile{$file_name} = [$size,$mtime];
+                        }
+                    }
+                }
+            }
+        }
     }
     foreach my $file (keys(%dependencies)) {
-        if ($currfile{$file}) {
+        if (exists($currfile{$file})) {
             unless ($mapping{$file} eq $file) {
                 $pathchanges{$file} = 1;
             }
@@ -9086,15 +9515,25 @@ sub ask_for_embedded_content {
             $newfiles{$file} = 1;
         }
     }
+    foreach my $file (keys(%currfile)) {
+        unless (($file eq $filename) ||
+                ($file eq $filename.'.bak') ||
+                ($dependencies{$file})) {
+            $unused{$file} = 1;
+        }
+    }
     foreach my $embed_file (sort {lc($a) cmp lc($b)} keys(%newfiles)) {
+        if ($actionurl eq '/adm/dependencies') {
+            next if ($embed_file =~ m{^\w+://});
+        }
         $upload_output .= &start_data_table_row().
-                          '<td><span class="LC_filename">'.$embed_file.'</span>';
+                          '<td><img src="'.&icon($embed_file).'" />&nbsp;'.
+                          '<span class="LC_filename">'.$embed_file.'</span>';
         unless ($mapping{$embed_file} eq $embed_file) {
             $upload_output .= '<br /><span class="LC_info" style="font-size:smaller;">'.&mt('changed from: [_1]',$mapping{$embed_file}).'</span>';
         }
         $upload_output .= '</td><td>';
-        if ($args->{'ignore_remote_references'}
-            && $embed_file =~ m{^\w+://}) {
+        if ($args->{'ignore_remote_references'} && $embed_file =~ m{^\w+://}) { 
             $upload_output.='<span class="LC_warning">'.&mt("URL points to other server.").'</span>';
             $numremref++;
         } elsif ($args->{'error_on_invalid_names'}
@@ -9103,24 +9542,84 @@ sub ask_for_embedded_content {
             $upload_output.='<span class="LC_warning">'.&mt('Invalid characters').'</span>';
             $numinvalid++;
         } else {
-            $upload_output .= &embedded_file_element('upload_embedded',$num,
+            $upload_output .= &embedded_file_element('upload_embedded',$counter,
                                                      $embed_file,\%mapping,
-                                                     $allfiles,$codebase);
-            $num++;
+                                                     $allfiles,$codebase,'upload');
+            $counter ++;
+            $numnew ++;
         }
         $upload_output .= '</td>'.&Apache::loncommon::end_data_table_row()."\n";
     }
     foreach my $embed_file (sort {lc($a) cmp lc($b)} keys(%existing)) {
-        $upload_output .= &start_data_table_row().
-                          '<td><span class="LC_filename">'.$embed_file.'</span></td>'.
-                          '<td><span class="LC_warning">'.&mt('Already exists').'</span></td>'.
-                          &Apache::loncommon::end_data_table_row()."\n";
+        if ($actionurl eq '/adm/dependencies') {
+            my ($size,$mtime) = &get_dependency_details(\%currfile,\%currsubfile,$embed_file);
+            $modify_output .= &start_data_table_row().
+                              '<td><a href="'.$path.'/'.$embed_file.'" style="text-decoration:none;">'.
+                              '<img src="'.&icon($embed_file).'" border="0" />'.
+                              '&nbsp;<span class="LC_filename">'.$embed_file.'</span></a></td>'.
+                              '<td>'.$size.'</td>'.
+                              '<td>'.$mtime.'</td>'.
+                              '<td><label><input type="checkbox" name="mod_upload_dep" '.
+                              'onclick="toggleBrowse('."'$counter'".')" id="mod_upload_dep_'.
+                              $counter.'" value="'.$counter.'" />'.&mt('Yes').'</label>'.
+                              '<div id="moduploaddep_'.$counter.'" style="display:none;">'.
+                              &embedded_file_element('upload_embedded',$counter,
+                                                     $embed_file,\%mapping,
+                                                     $allfiles,$codebase,'modify').
+                              '</div></td>'.
+                              &end_data_table_row()."\n";
+            $counter ++;
+        } else {
+            $upload_output .= &start_data_table_row().
+                              '<td><span class="LC_filename">'.$embed_file.'</span></td>';
+                              '<td><span class="LC_warning">'.&mt('Already exists').'</span></td>'.
+                              &Apache::loncommon::end_data_table_row()."\n";
+        }
+    }
+    my $delidx = $counter;
+    foreach my $oldfile (sort {lc($a) cmp lc($b)} keys(%unused)) {
+        my ($size,$mtime) = &get_dependency_details(\%currfile,\%currsubfile,$oldfile);
+        $delete_output .= &start_data_table_row().
+                          '<td><img src="'.&icon($oldfile).'" />'.
+                          '&nbsp;<span class="LC_filename">'.$oldfile.'</span></td>'.
+                          '<td>'.$size.'</td>'.
+                          '<td>'.$mtime.'</td>'.
+                          '<td><label><input type="checkbox" name="del_upload_dep" '.
+                          ' value="'.$delidx.'" />'.&mt('Yes').'</label>'.
+                          &embedded_file_element('upload_embedded',$delidx,
+                                                 $oldfile,\%mapping,$allfiles,
+                                                 $codebase,'delete').'</td>'.
+                          &end_data_table_row()."\n"; 
+        $numunused ++;
+        $delidx ++;
     }
     if ($upload_output) {
         $upload_output = &start_data_table().
                          $upload_output.
                          &end_data_table()."\n";
     }
+    if ($modify_output) {
+        $modify_output = &start_data_table().
+                         &start_data_table_header_row().
+                         '<th>'.&mt('File').'</th>'.
+                         '<th>'.&mt('Size (KB)').'</th>'.
+                         '<th>'.&mt('Modified').'</th>'.
+                         '<th>'.&mt('Upload replacement?').'</th>'.
+                         &end_data_table_header_row().
+                         $modify_output.
+                         &end_data_table()."\n";
+    }
+    if ($delete_output) {
+        $delete_output = &start_data_table().
+                         &start_data_table_header_row().
+                         '<th>'.&mt('File').'</th>'.
+                         '<th>'.&mt('Size (KB)').'</th>'.
+                         '<th>'.&mt('Modified').'</th>'.
+                         '<th>'.&mt('Delete?').'</th>'.
+                         &end_data_table_header_row().
+                         $delete_output.
+                         &end_data_table()."\n";
+    }
     my $applies = 0;
     if ($numremref) {
         $applies ++;
@@ -9131,15 +9630,37 @@ sub ask_for_embedded_content {
     if ($numexisting) {
         $applies ++;
     }
-    if ($num) {
+    if ($counter || $numunused) {
         $output = '<form name="upload_embedded" action="'.$actionurl.'"'.
                   ' method="post" enctype="multipart/form-data">'."\n".
-                  $state.
-                  '<h3>'.&mt('Upload embedded files').
-                  ':</h3>'.$upload_output.'<br />'."\n".
-                  '<input type ="hidden" name="number_embedded_items" value="'.
-                  $num.'" />'."\n";
-        if ($actionurl eq '') {
+                  $state.'<h3>'.$heading.'</h3>'; 
+        if ($actionurl eq '/adm/dependencies') {
+            if ($numnew) {
+                $output .= '<h4>'.&mt('Missing dependencies').'</h4>'.
+                           '<p>'.&mt('The following files need to be uploaded.').'</p>'."\n".
+                           $upload_output.'<br />'."\n";
+            }
+            if ($numexisting) {
+                $output .= '<h4>'.&mt('Uploaded dependencies (in use)').'</h4>'.
+                           '<p>'.&mt('Upload a new file to replace the one currently in use.').'</p>'."\n".
+                           $modify_output.'<br />'."\n";
+                           $buttontext = &mt('Save changes');
+            }
+            if ($numunused) {
+                $output .= '<h4>'.&mt('Unused files').'</h4>'.
+                           '<p>'.&mt('The following uploaded files are no longer used.').'</p>'."\n".
+                           $delete_output.'<br />'."\n";
+                           $buttontext = &mt('Save changes');
+            }
+        } else {
+            $output .= $upload_output.'<br />'."\n";
+        }
+        $output .= '<input type ="hidden" name="number_embedded_items" value="'.
+                   $counter.'" />'."\n";
+        if ($actionurl eq '/adm/dependencies') { 
+            $output .= '<input type ="hidden" name="number_newemb_items" value="'.
+                       $numnew.'" />'."\n";
+        } elsif ($actionurl eq '') {
             $output .=  '<input type="hidden" name="phase" value="three" />';
         }
     } elsif ($applies) {
@@ -9167,13 +9688,13 @@ sub ask_for_embedded_content {
         $output .= $upload_output.'<br />';
     }
     my ($pathchange_output,$chgcount);
-    $chgcount = $num;
+    $chgcount = $counter;
     if (keys(%pathchanges) > 0) {
         foreach my $embed_file (sort {lc($a) cmp lc($b)} keys(%pathchanges)) {
-            if ($num) {
+            if ($counter) {
                 $output .= &embedded_file_element('pathchange',$chgcount,
                                                   $embed_file,\%mapping,
-                                                  $allfiles,$codebase);
+                                                  $allfiles,$codebase,'change');
             } else {
                 $pathchange_output .= 
                     &start_data_table_row().
@@ -9182,14 +9703,14 @@ sub ask_for_embedded_content {
                     '<td>'.$mapping{$embed_file}.'</td>'.
                     '<td>'.$embed_file.
                     &embedded_file_element('pathchange',$numpathchg,$embed_file,
-                                           \%mapping,$allfiles,$codebase).
+                                           \%mapping,$allfiles,$codebase,'change').
                     '</td>'.&end_data_table_row();
             }
             $numpathchg ++;
             $chgcount ++;
         }
     }
-    if ($num) {
+    if ($counter) {
         if ($numpathchg) {
             $output .= '<input type ="hidden" name="number_pathchange_items" value="'.
                        $numpathchg.'" />'."\n";
@@ -9199,9 +9720,10 @@ sub ask_for_embedded_content {
             $output .= '<input type="hidden" name="phase" value="three" />'."\n";
         } elsif ($actionurl eq '/adm/portfolio' || $actionurl eq '/adm/coursegrp_portfolio') {
             $output .= '<input type="hidden" name="action" value="upload_embedded" />';
+        } elsif ($actionurl eq '/adm/dependencies') {
+            $output .= '<input type="hidden" name="action" value="process_changes" />';
         }
-        $output .=  '<input type ="submit" value="'.&mt('Upload Listed Files').'" />'."\n".
-                    &mt('(only files for which a location has been provided will be uploaded)').'</form>'."\n";
+        $output .=  '<input type ="submit" value="'.$buttontext.'" />'."\n".'</form>'."\n";
     } elsif ($numpathchg) {
         my %pathchange = ();
         $output .= &modify_html_form('pathchange',$actionurl,$state,\%pathchange,$pathchange_output);
@@ -9209,15 +9731,15 @@ sub ask_for_embedded_content {
             $output .= '<p>'.&mt('or').'</p>'; 
         } 
     }
-    return ($output,$num,$numpathchg);
+    return ($output,$counter,$numpathchg);
 }
 
 sub embedded_file_element {
-    my ($context,$num,$embed_file,$mapping,$allfiles,$codebase) = @_;
+    my ($context,$num,$embed_file,$mapping,$allfiles,$codebase,$type) = @_;
     return unless ((ref($mapping) eq 'HASH') && (ref($allfiles) eq 'HASH') &&
                    (ref($codebase) eq 'HASH'));
     my $output;
-    if ($context eq 'upload_embedded') {
+    if (($context eq 'upload_embedded') && ($type ne 'delete')) {
        $output = '<input name="embedded_item_'.$num.'" type="file" value="" />'."\n";
     }
     $output .= '<input name="embedded_orig_'.$num.'" type="hidden" value="'.
@@ -9244,6 +9766,50 @@ sub embedded_file_element {
     return $output;
 }
 
+sub get_dependency_details {
+    my ($currfile,$currsubfile,$embed_file) = @_;
+    my ($size,$mtime,$showsize,$showmtime);
+    if ((ref($currfile) eq 'HASH') && (ref($currsubfile))) {
+        if ($embed_file =~ m{/}) {
+            my ($path,$fname) = split(/\//,$embed_file);
+            if (ref($currsubfile->{$path}{$fname}) eq 'ARRAY') {
+                ($size,$mtime) = @{$currsubfile->{$path}{$fname}};
+            }
+        } else {
+            if (ref($currfile->{$embed_file}) eq 'ARRAY') {
+                ($size,$mtime) = @{$currfile->{$embed_file}};
+            }
+        }
+        $showsize = $size/1024.0;
+        $showsize = sprintf("%.1f",$showsize);
+        if ($mtime > 0) {
+            $showmtime = &Apache::lonlocal::locallocaltime($mtime);
+        }
+    }
+    return ($showsize,$showmtime);
+}
+
+sub ask_embedded_js {
+    return <<"END";
+<script type="text/javascript"">
+// <![CDATA[
+function toggleBrowse(counter) {
+    var chkboxid = document.getElementById('mod_upload_dep_'+counter);
+    var fileid = document.getElementById('embedded_item_'+counter);
+    var uploaddivid = document.getElementById('moduploaddep_'+counter);
+    if (chkboxid.checked == true) {
+        uploaddivid.style.display='block';
+    } else {
+        uploaddivid.style.display='none';
+        fileid.value = '';
+    }
+}
+// ]]>
+</script>
+
+END
+}
+
 sub upload_embedded {
     my ($context,$dirpath,$uname,$udom,$dir_root,$url_root,$group,$disk_quota,
         $current_disk_usage,$hiddenstate,$actionurl) = @_;
@@ -9302,7 +9868,6 @@ sub upload_embedded {
             $output .= &mt('File name not allowed - rename the file to remove the number immediately before the file extension([_1]) and re-upload.',$2).'<br />';
             next;
         }
-
         $env{'form.embedded_item_'.$i.'.filename'}=$fname;
         if ($context eq 'portfolio') {
             my $result;
@@ -9359,13 +9924,15 @@ sub upload_embedded {
             if (!open($fh,'>'.$dest)) {
                 &Apache::lonnet::logthis('Failed to create '.$dest);
                 $output .= '<span class="LC_error">'.
-                           &mt('An error occurred while trying to upload [_1] for embedded element [_2].',$orig_uploaded_filename,$env{'form.embedded_orig_'.$i}).
+                           &mt('An error occurred while trying to upload [_1] for embedded element [_2].',
+                               $orig_uploaded_filename,$env{'form.embedded_orig_'.$i}).
                            '</span><br />';
             } else {
                 if (!print $fh $env{'form.embedded_item_'.$i}) {
                     &Apache::lonnet::logthis('Failed to write to '.$dest);
                     $output .= '<span class="LC_error">'.
-                              &mt('An error occurred while writing the file [_1] for embedded element [_2].',$orig_uploaded_filename,$env{'form.embedded_orig_'.$i}).
+                              &mt('An error occurred while writing the file [_1] for embedded element [_2].',
+                                  $orig_uploaded_filename,$env{'form.embedded_orig_'.$i}).
                               '</span><br />';
                 } else {
                     $output .= &mt('Uploaded [_1]','<span class="LC_filename">'.
@@ -9387,15 +9954,17 @@ sub upload_embedded {
     }
     $output .= &modify_html_form('upload_embedded',$actionurl,$hiddenstate,\%pathchange);
     $returnflag = 'ok';
-    if (keys(%pathchange) > 0) {
+    my $numpathchgs = scalar(keys(%pathchange));
+    if ($numpathchgs > 0) {
         if ($context eq 'portfolio') {
             $output .= '<p>'.&mt('or').'</p>';
         } elsif ($context eq 'testbank') {
-            $output .=  '<p>'.&mt('Or [_1]continue[_2] the testbank import without modifying the reference(s).','<a href="javascript:document.testbankForm.submit();">','</a>').'</p>';
+            $output .=  '<p>'.&mt('Or [_1]continue[_2] the testbank import without modifying the reference(s).',
+                                  '<a href="javascript:document.testbankForm.submit();">','</a>').'</p>';
             $returnflag = 'modify_orightml';
         }
     }
-    return ($output.$footer,$returnflag);
+    return ($output.$footer,$returnflag,$numpathchgs);
 }
 
 sub modify_html_form {
@@ -9430,7 +9999,7 @@ sub modify_html_form {
                     '<input type="hidden" name="embedded_orig_'.$i.'" value="'.
                     &escape($env{'form.embedded_orig_'.$i}).'" /></td>'.
                     &end_data_table_row();
-            } 
+            }
         }
     } else {
         $modifyform = $pathchgtable;
@@ -9441,6 +10010,9 @@ sub modify_html_form {
         }
     }
     if ($modifyform) {
+        if ($actionurl eq '/adm/dependencies') {
+            $hiddenstate .= '<input type="hidden" name="action" value="modifyhrefs" />';
+        }
         return '<h3>'.&mt('Changes in content of HTML file required').'</h3>'."\n".
                '<p>'.&mt('Changes need to be made to the reference(s) used for one or more of the dependencies, if your HTML file is to work correctly:').'<ol>'."\n".
                '<li>'.&mt('For consistency between the reference(s) and the location of the corresponding stored file within LON-CAPA.').'</li>'."\n".
@@ -9469,23 +10041,55 @@ sub modify_html_refs {
         $container = $env{'form.container'};
     } elsif ($context eq 'coursedoc') {
         $container = $env{'form.primaryurl'};
+    } elsif ($context eq 'manage_dependencies') {
+        (undef,undef,$container) = &Apache::lonnet::decode_symb($env{'form.symb'});
+        $container = "/$container";
     } else {
         $container = $Apache::lonnet::perlvar{'lonDocRoot'}.$env{'form.filename'};
     }
     my (%allfiles,%codebase,$output,$content);
     my @changes = &get_env_multiple('form.namechange');
-    return unless (@changes > 0);
-    if (($context eq 'portfolio') || ($context eq 'coursedoc')) {
-        return unless ($container =~ m{^/uploaded/\Q$udom\E/\Q$uname\E/});
+    unless (@changes > 0) {
+        if (wantarray) {
+            return ('',0,0); 
+        } else {
+            return;
+        }
+    }
+    if (($context eq 'portfolio') || ($context eq 'coursedoc') || 
+        ($context eq 'manage_dependencies')) {
+        unless ($container =~ m{^/uploaded/\Q$udom\E/\Q$uname\E/}) {
+            if (wantarray) {
+                return ('',0,0);
+            } else {
+                return;
+            }
+        } 
         $content = &Apache::lonnet::getfile($container);
-        return if ($content eq '-1');
+        if ($content eq '-1') {
+            if (wantarray) {
+                return ('',0,0);
+            } else {
+                return;
+            }
+        }
     } else {
-        return unless ($container =~ /^\Q$dir_root\E/); 
+        unless ($container =~ /^\Q$dir_root\E/) {
+            if (wantarray) {
+                return ('',0,0);
+            } else {
+                return;
+            }
+        } 
         if (open(my $fh,"<$container")) {
             $content = join('', <$fh>);
             close($fh);
         } else {
-            return;
+            if (wantarray) {
+                return ('',0,0);
+            } else {
+                return;
+            }
         }
     }
     my ($count,$codebasecount) = (0,0);
@@ -9519,13 +10123,14 @@ sub modify_html_refs {
             }
             if ($count || $codebasecount) {
                 my $saveresult;
-                if ($context eq 'portfolio' || $context eq 'coursedoc') {
+                if (($context eq 'portfolio') || ($context eq 'coursedoc') || 
+                    ($context eq 'manage_dependencies')) {
                     my $url = &Apache::lonnet::store_edited_file($container,$content,$udom,$uname,\$saveresult);
                     if ($url eq $container) {
                         my ($fname) = ($container =~ m{/([^/]+)$});
                         $output = '<p>'.&mt('Updated [quant,_1,reference] in [_2].',
                                             $count,'<span class="LC_filename">'.
-                                            $fname.'</span>').'</p>'; 
+                                            $fname.'</span>').'</p>';
                     } else {
                          $output = '<p class="LC_error">'.
                                    &mt('Error: update failed for: [_1].',
@@ -9552,7 +10157,11 @@ sub modify_html_refs {
                      ' to modify references: '.$parse_result);
         }
     }
-    return $output;
+    if (wantarray) {
+        return ($output,$count,$codebasecount);
+    } else {
+        return $output;
+    }
 }
 
 sub check_for_existing {
@@ -9719,46 +10328,226 @@ sub is_archive_file {
 }
 
 sub decompress_form {
-    my ($mimetype,$archiveurl,$action,$noextract,$hiddenelements) = @_;
+    my ($mimetype,$archiveurl,$action,$noextract,$hiddenelements,$dirlist) = @_;
     my %lt = &Apache::lonlocal::texthash (
         this => 'This file is an archive file.',
+        camt => 'This file is a Camtasia archive file.',
+        itsc => 'Its contents are as follows:',
         youm => 'You may wish to extract its contents.',
-        camt => 'Extraction of contents is recommended for Camtasia zip files.',
-        perm => 'Permanently remove archive file after extraction of contents?',
         extr => 'Extract contents',
+        auto => 'LON-CAPA can process the files automatically, or you can decide how each should be handled.',
+        proa => 'Process automatically?',
         yes  => 'Yes',
         no   => 'No',
+        fold => 'Title for folder containing movie',
+        movi => 'Title for page containing embedded movie', 
     );
-    my $output = '<p>'.$lt{'this'}.' '.$lt{'youm'}.'<br />';
+    my $fileloc = &Apache::lonnet::filelocation(undef,$archiveurl);
+    my ($is_camtasia,$topdir,%toplevel,@paths);
+    my $info = &list_archive_contents($fileloc,\@paths);
+    if (@paths) {
+        foreach my $path (@paths) {
+            $path =~ s{^/}{};
+            if ($path =~ m{^([^/]+)/$}) {
+                $topdir = $1;
+            }
+            if ($path =~ m{^([^/]+)/}) {
+                $toplevel{$1} = $path;
+            } else {
+                $toplevel{$path} = $path;
+            }
+        }
+    }
     if ($mimetype =~ m{^application/(x\-)?(compressed|zip)}) {
-        $output .= $lt{'camt'};
+        my @camtasia = ("$topdir/","$topdir/index.html",
+                        "$topdir/media/",
+                        "$topdir/media/$topdir.mp4",
+                        "$topdir/media/FirstFrame.png",
+                        "$topdir/media/player.swf",
+                        "$topdir/media/swfobject.js",
+                        "$topdir/media/expressInstall.swf");
+        my @diffs = &compare_arrays(\@paths,\@camtasia);
+        if (@diffs == 0) {
+            $is_camtasia = 1;
+        }
     }
-    $output .= '</p>';
-    $output .= <<"START";
-<p>
-$lt{'this'} $lt{'youm'}
-</p>
-<div id="uploadfileresult">
-  <form name="uploaded_decompress" action="$action" method="post">
-  <input type="hidden" name="archiveurl" value="$archiveurl" />
-START
+    my $output;
+    if ($is_camtasia) {
+        $output = <<"ENDCAM";
+<script type="text/javascript" language="Javascript">
+// <![CDATA[
+
+function camtasiaToggle() {
+    for (var i=0; i<document.uploaded_decompress.autoextract_camtasia.length; i++) {
+        if (document.uploaded_decompress.autoextract_camtasia[i].checked) {
+            if (document.uploaded_decompress.autoextract_camtasia[i].value == 1) {
+
+                document.getElementById('camtasia_titles').style.display='block';
+            } else {
+                document.getElementById('camtasia_titles').style.display='none';
+            }
+        }
+    }
+    return;
+}
+
+// ]]>
+</script>
+<p>$lt{'camt'}</p>
+ENDCAM
+    } else {
+        $output = '<p>'.$lt{'this'};
+        if ($info eq '') {
+            $output .= ' '.$lt{'youm'}.'</p>'."\n";
+        } else {
+            $output .= ' '.$lt{'itsc'}.'</p>'."\n".
+                       '<div><pre>'.$info.'</pre></div>';
+        }
+    }
+    $output .= '<form name="uploaded_decompress" action="'.$action.'" method="post">'."\n";
+    my $duplicates;
+    my $num = 0;
+    if (ref($dirlist) eq 'ARRAY') {
+        foreach my $item (@{$dirlist}) {
+            if (ref($item) eq 'ARRAY') {
+                if (exists($toplevel{$item->[0]})) {
+                    $duplicates .= 
+                        &start_data_table_row().
+                        '<td><label><input type="radio" name="archive_overwrite_'.$num.'" '.
+                        'value="0" checked="checked" />'.&mt('No').'</label>'.
+                        '&nbsp;<label><input type="radio" name="archive_overwrite_'.$num.'" '.
+                        'value="1" />'.&mt('Yes').'</label>'.
+                        '<input type="hidden" name="archive_overwrite_name_'.$num.'" value="'.$item->[0].'" /></td>'."\n".
+                        '<td>'.$item->[0].'</td>';
+                    if ($item->[2]) {
+                        $duplicates .= '<td>'.&mt('Directory').'</td>';
+                    } else {
+                        $duplicates .= '<td>'.&mt('File').'</td>';
+                    }
+                    $duplicates .= '<td>'.$item->[3].'</td>'.
+                                   '<td>'.
+                                   &Apache::lonlocal::locallocaltime($item->[4]).
+                                   '</td>'.
+                                   &end_data_table_row();
+                    $num ++;
+                }
+            }
+        }
+    }
+    my $itemcount;
+    if (@paths > 0) {
+        $itemcount = scalar(@paths);
+    } else {
+        $itemcount = 1;
+    }
+    if ($is_camtasia) {
+        $output .= $lt{'auto'}.'<br />'.
+                   '<span class="LC_nobreak">'.$lt{'proa'}.'<label>'.
+                   '<input type="radio" name="autoextract_camtasia" value="1" onclick="javascript:camtasiaToggle();" checked="checked" />'.
+                   $lt{'yes'}.'</label>&nbsp;<label>'.
+                   '<input type="radio" name="autoextract_camtasia" value="0" onclick="javascript:camtasiaToggle();" />'.
+                   $lt{'no'}.'</label></span><br />'.
+                   '<div id="camtasia_titles" style="display:block">'.
+                   &Apache::lonhtmlcommon::start_pick_box().
+                   &Apache::lonhtmlcommon::row_title($lt{'fold'}).
+                   '<input type="textbox" name="camtasia_foldername" value="'.$env{'form.comment'}.'" />'."\n".
+                   &Apache::lonhtmlcommon::row_closure().
+                   &Apache::lonhtmlcommon::row_title($lt{'movi'}).
+                   '<input type="textbox" name="camtasia_moviename" value="" />'."\n".
+                   &Apache::lonhtmlcommon::row_closure(1).
+                   &Apache::lonhtmlcommon::end_pick_box().
+                   '</div>';
+    }
+    $output .= 
+        '<input type="hidden" name="archive_overwrite_total" value="'.$num.'" />'.
+        '<input type="hidden" name="archive_itemcount" value="'.$itemcount.'" />'.
+        "\n";
+    if ($duplicates ne '') {
+        $output .= '<p><span class="LC_warning">'.
+                   &mt('Warning: decompression of the archive will overwrite the following items which already exist:').'</span><br />'.  
+                   &start_data_table().
+                   &start_data_table_header_row().
+                   '<th>'.&mt('Overwrite?').'</th>'.
+                   '<th>'.&mt('Name').'</th>'.
+                   '<th>'.&mt('Type').'</th>'.
+                   '<th>'.&mt('Size').'</th>'.
+                   '<th>'.&mt('Last modified').'</th>'.
+                   &end_data_table_header_row().
+                   $duplicates.
+                   &end_data_table().
+                   '</p>';
+    }
+    $output .= '<input type="hidden" name="archiveurl" value="'.$archiveurl.'" />'."\n";
     if (ref($hiddenelements) eq 'HASH') {
         foreach my $hidden (sort(keys(%{$hiddenelements}))) {
             $output .= '<input type="hidden" name="'.$hidden.'" value="'.$hiddenelements->{$hidden}.'" />'."\n";
         }
     }
     $output .= <<"END";
-<span class="LC_nobreak">$lt{'perm'}&nbsp;
-<label><input type="radio" name="archivedelete" value="0" checked="checked" />$lt{'no'}</label>&nbsp;&nbsp;
-<label><input type="radio" name="archivedelete" value="1" />$lt{'yes'}</label></span><br />
+<br />
 <input type="submit" name="decompress" value="$lt{'extr'}" />
 </form>
 $noextract
-</div>
 END
     return $output;
 }
 
+sub decompression_utility {
+    my ($program) = @_;
+    my @utilities = ('tar','gunzip','bunzip2','unzip'); 
+    my $location;
+    if (grep(/^\Q$program\E$/,@utilities)) { 
+        foreach my $dir ('/bin/','/usr/bin/','/usr/local/bin/','/sbin/',
+                         '/usr/sbin/') {
+            if (-x $dir.$program) {
+                $location = $dir.$program;
+                last;
+            }
+        }
+    }
+    return $location;
+}
+
+sub list_archive_contents {
+    my ($file,$pathsref) = @_;
+    my (@cmd,$output);
+    my $needsregexp;
+    if ($file =~ /\.zip$/) {
+        @cmd = (&decompression_utility('unzip'),"-l");
+        $needsregexp = 1;
+    } elsif (($file =~ m/\.tar\.gz$/) ||
+             ($file =~ /\.tgz$/)) {
+        @cmd = (&decompression_utility('tar'),"-ztf");
+    } elsif ($file =~ /\.tar\.bz2$/) {
+        @cmd = (&decompression_utility('tar'),"-jtf");
+    } elsif ($file =~ m|\.tar$|) {
+        @cmd = (&decompression_utility('tar'),"-tf");
+    }
+    if (@cmd) {
+        undef($!);
+        undef($@);
+        if (open(my $fh,"-|", @cmd, $file)) {
+            while (my $line = <$fh>) {
+                $output .= $line;
+                chomp($line);
+                my $item;
+                if ($needsregexp) {
+                    ($item) = ($line =~ /^\s*\d+\s+[\d\-]+\s+[\d:]+\s*(.+)$/); 
+                } else {
+                    $item = $line;
+                }
+                if ($item ne '') {
+                    unless (grep(/^\Q$item\E$/,@{$pathsref})) {
+                        push(@{$pathsref},$item);
+                    } 
+                }
+            }
+            close($fh);
+        }
+    }
+    return $output;
+}
+
 sub decompress_uploaded_file {
     my ($file,$dir) = @_;
     &Apache::lonnet::appenv({'cgi.file' => $file});
@@ -9788,8 +10577,6 @@ sub process_decompression {
         } else {
             my @ids=&Apache::lonnet::current_machine_ids();
             my $currdir = "$dir_root/$destination";
-            my ($currdirlistref,$currlisterror) =
-                &Apache::lonnet::dirlist($currdir,$docudom,$docuname,1);
             if (grep(/^\Q$docuhome\E$/,@ids)) {
                 $dir = &LONCAPA::propath($docudom,$docuname).
                        "$dir_root/$destination";
@@ -9800,47 +10587,61 @@ sub process_decompression {
                     $error = &mt('Archive file not found.');
                 }
             }
-            if ($dir eq '') {
+            my (@to_overwrite,@to_skip);
+            if ($env{'form.archive_overwrite_total'} > 0) {
+                my $total = $env{'form.archive_overwrite_total'};
+                for (my $i=0; $i<$total; $i++) {
+                    if ($env{'form.archive_overwrite_'.$i} == 1) {
+                        push(@to_overwrite,$env{'form.archive_overwrite_name_'.$i});
+                    } elsif ($env{'form.archive_overwrite_'.$i} == 0) {
+                        push(@to_skip,$env{'form.archive_overwrite_name_'.$i});
+                    }
+                }
+            }
+            my $numskip = scalar(@to_skip);
+            if (($numskip > 0) && 
+                ($numskip == $env{'form.archive_itemcount'})) {
+                $warning = &mt('All items in the archive file already exist, and no overwriting of existing files has been requested.');         
+            } elsif ($dir eq '') {
                 $error = &mt('Directory containing archive file unavailable.');
             } elsif (!$error) {
-                my ($decompressed,$display) = &decompress_uploaded_file($file,$dir);
+                my ($decompressed,$display);
+                if ($numskip > 0) {
+                    my $tempdir = time.'_'.$$.int(rand(10000));
+                    mkdir("$dir/$tempdir",0755);
+                    system("mv $dir/$file $dir/$tempdir/$file");
+                    ($decompressed,$display) = 
+                        &decompress_uploaded_file($file,"$dir/$tempdir");
+                    foreach my $item (@to_skip) {
+                        if (($item ne '') && ($item !~ /\.\./)) {
+                            if (-f "$dir/$tempdir/$item") { 
+                                unlink("$dir/$tempdir/$item");
+                            } elsif (-d "$dir/$tempdir/$item") {
+                                system("rm -rf $dir/$tempdir/$item");
+                            }
+                        }
+                    }
+                    system("mv $dir/$tempdir/* $dir");
+                    rmdir("$dir/$tempdir");   
+                } else {
+                    ($decompressed,$display) = 
+                        &decompress_uploaded_file($file,$dir);
+                }
                 if ($decompressed eq 'ok') {
-                    $output = &mt('Files extracted successfully from archive.').'<br />';
+                    $output = '<p class="LC_info">'.
+                              &mt('Files extracted successfully from archive.').
+                              '</p>'."\n";
                     my ($warning,$result,@contents);
                     my ($newdirlistref,$newlisterror) =
                         &Apache::lonnet::dirlist($currdir,$docudom,
                                                  $docuname,1);
                     my (%is_dir,%changes,@newitems);
                     my $dirptr = 16384;
-                    if (ref($currdirlistref) eq 'ARRAY') {
-                        my @curritems;
-                        foreach my $dir_line (@{$currdirlistref}) {
-                            my ($item,$rest)=split(/\&/,$dir_line,2);
-                            unless ($item =~ /\.+$/) {
-                                push(@curritems,$item);
-                            }
-                        }
-                        if (ref($newdirlistref) eq 'ARRAY') {
-                            foreach my $dir_line (@{$newdirlistref}) {
-                                my ($item,undef,undef,$testdir)=split(/\&/,$dir_line,4);
-                                unless ($item =~ /^\.+$/) {
-                                    if ($dirptr&$testdir) {
-                                        $is_dir{$item} = 1;
-                                    }
-                                    push(@newitems,$item);
-                                }
-                            }
-                            my @diffs = &compare_arrays(\@curritems,\@newitems);
-                            if (@diffs > 0) {
-                               foreach my $item (@diffs) {
-                                   $changes{$item} = 1;
-                               }
-                            }
-                        }
-                    } elsif (ref($newdirlistref) eq 'ARRAY') {
+                    if (ref($newdirlistref) eq 'ARRAY') {
                         foreach my $dir_line (@{$newdirlistref}) {
                             my ($item,undef,undef,$testdir)=split(/\&/,$dir_line,5);
-                            unless ($item =~ /\.+$/) {
+                            unless (($item =~ /^\.+$/) || ($item eq $file) || 
+                                    ((@to_skip > 0) && (grep(/^\Q$item\E$/,@to_skip)))) {
                                 push(@newitems,$item);
                                 if ($dirptr&$testdir) {
                                     $is_dir{$item} = 1;
@@ -9857,18 +10658,66 @@ sub process_decompression {
                         }
                     }
                     if (@contents > 0) {
-                        my (%children,%parent);
-                        my $wantform = 1;
+                        my $wantform;
+                        unless ($env{'form.autoextract_camtasia'}) {
+                            $wantform = 1;
+                        }
+                        my (%children,%parent,%dirorder,%titles);
                         my ($count,$datatable) = &get_extracted($docudom,$docuname,
                                                                 $currdir,\%is_dir,
                                                                 \%children,\%parent,
-                                                                \@contents,$wantform);
+                                                                \@contents,\%dirorder,
+                                                                \%titles,$wantform);
                         if ($datatable ne '') {
                             $output .= &archive_options_form('decompressed',$datatable,
                                                              $count,$hiddenelem);
-                            my $startcount = 3;
+                            my $startcount = 6;
                             $output .= &archive_javascript($startcount,$count,
-                                                           %children);
+                                                           \%titles,\%children);
+                        }
+                        if ($env{'form.autoextract_camtasia'}) {
+                            my %displayed;
+                            my $total = 1;
+                            $env{'form.archive_directory'} = [];
+                            foreach my $i (sort { $a <=> $b } keys(%dirorder)) {
+                                my $path = join('/',map { $titles{$_}; } @{$dirorder{$i}});
+                                $path =~ s{/$}{};
+                                my $item;
+                                if ($path ne '') {
+                                    $item = "$path/$titles{$i}";
+                                } else {
+                                    $item = $titles{$i};
+                                }
+                                $env{'form.archive_content_'.$i} = "$dir_root/$destination/$item";
+                                if ($item eq $contents[0]) {
+                                    push(@{$env{'form.archive_directory'}},$i);
+                                    $env{'form.archive_'.$i} = 'display';
+                                    $env{'form.archive_title_'.$i} = $env{'form.camtasia_foldername'};
+                                    $displayed{'folder'} = $i;
+                                } elsif ($item eq "$contents[0]/index.html") {
+                                    $env{'form.archive_'.$i} = 'display';
+                                    $env{'form.archive_title_'.$i} = $env{'form.camtasia_moviename'};
+                                    $displayed{'web'} = $i;
+                                } else {
+                                    if ($item eq "$contents[0]/media") {
+                                        push(@{$env{'form.archive_directory'}},$i);
+                                    }
+                                    $env{'form.archive_'.$i} = 'dependency';
+                                }
+                                $total ++;
+                            }
+                            for (my $i=1; $i<$total; $i++) {
+                                next if ($i == $displayed{'web'});
+                                next if ($i == $displayed{'folder'});
+                                $env{'form.archive_dependent_on_'.$i} = $displayed{'web'};
+                            }
+                            $env{'form.phase'} = 'decompress_cleanup';
+                            $env{'form.archivedelete'} = 1;
+                            $env{'form.archive_count'} = $total-1;
+                            $output .=
+                                &process_extracted_files('coursedocs',$docudom,
+                                                         $docuname,$destination,
+                                                         $dir_root,$hiddenelem);
                         }
                     } else {
                         $warning = &mt('No new items extracted from archive file.');
@@ -9891,15 +10740,19 @@ sub process_decompression {
 }
 
 sub get_extracted {
-    my ($docudom,$docuname,$currdir,$is_dir,$children,$parent,$contents,$wantform) = @_;
+    my ($docudom,$docuname,$currdir,$is_dir,$children,$parent,$contents,$dirorder,
+        $titles,$wantform) = @_;
     my $count = 0;
-    my $lastcontainer = 0;
     my $depth = 0;
     my $datatable;
+    my @hierarchy;
     return unless ((ref($is_dir) eq 'HASH') && (ref($children) eq 'HASH') &&
-                   (ref($parent) eq 'HASH') && (ref($contents) eq 'ARRAY'));
+                   (ref($parent) eq 'HASH') && (ref($contents) eq 'ARRAY') &&
+                   (ref($dirorder) eq 'HASH') && (ref($titles) eq 'HASH'));
     foreach my $item (@{$contents}) {
         $count ++;
+        @{$dirorder->{$count}} = @hierarchy;
+        $titles->{$count} = $item;
         &archive_hierarchy($depth,$count,$parent,$children);
         if ($wantform) {
             $datatable .= &archive_row($is_dir->{$item},$item,
@@ -9907,25 +10760,26 @@ sub get_extracted {
         }
         if ($is_dir->{$item}) {
             $depth ++;
-            $lastcontainer = $count;
-            $parent->{$depth} = $lastcontainer;
+            push(@hierarchy,$count);
+            $parent->{$depth} = $count;
             $datatable .=
                 &recurse_extracted_archive("$currdir/$item",$docudom,$docuname,
-                                           \$depth,\$count,\$lastcontainer,
-                                           $children,$parent,$wantform);
+                                           \$depth,\$count,\@hierarchy,$dirorder,
+                                           $children,$parent,$titles,$wantform);
             $depth --;
-            $lastcontainer = $parent->{$depth};
+            pop(@hierarchy);
         }
     }
     return ($count,$datatable);
 }
 
 sub recurse_extracted_archive {
-    my ($currdir,$docudom,$docuname,$depth,$count,$lastcontainer,
-        $children,$parent,$wantform) = @_;
+    my ($currdir,$docudom,$docuname,$depth,$count,$hierarchy,$dirorder,
+        $children,$parent,$titles,$wantform) = @_;
     my $result='';
-    unless ((ref($depth)) && (ref($count)) && (ref($lastcontainer)) &&
-            (ref($children) eq 'HASH') && (ref($parent) eq 'HASH')) {
+    unless ((ref($depth)) && (ref($count)) && (ref($hierarchy) eq 'ARRAY') &&
+            (ref($children) eq 'HASH') && (ref($parent) eq 'HASH') &&
+            (ref($dirorder) eq 'HASH')) {
         return $result;
     }
     my $dirptr = 16384;
@@ -9936,7 +10790,10 @@ sub recurse_extracted_archive {
             my ($item,undef,undef,$testdir)=split(/\&/,$dir_line,5);
             unless ($item =~ /^\.+$/) {
                 $$count ++;
+                @{$dirorder->{$$count}} = @{$hierarchy};
+                $titles->{$$count} = $item;
                 &archive_hierarchy($$depth,$$count,$parent,$children);
+
                 my $is_dir;
                 if ($dirptr&$testdir) {
                     $is_dir = 1;
@@ -9946,15 +10803,15 @@ sub recurse_extracted_archive {
                 }
                 if ($is_dir) {
                     $$depth ++;
-                    $$lastcontainer = $$count;
-                    $parent->{$$depth} = $$lastcontainer;
+                    push(@{$hierarchy},$$count);
+                    $parent->{$$depth} = $$count;
                     $result .=
                         &recurse_extracted_archive("$currdir/$item",$docudom,
                                                    $docuname,$depth,$count,
-                                                   $lastcontainer,$children,
-                                                   $parent,$wantform);
+                                                   $hierarchy,$dirorder,$children,
+                                                   $parent,$titles,$wantform);
                     $$depth --;
-                    $$lastcontainer = $parent->{$$depth};
+                    pop(@{$hierarchy});
                 }
             }
         }
@@ -9976,15 +10833,20 @@ sub archive_row {
     my ($is_dir,$item,$currdir,$depth,$count) = @_;
     my ($name) = ($item =~ m{([^/]+)$});
     my %choices = &Apache::lonlocal::texthash (
-                                       'display'    => 'Add as File',
+                                       'display'    => 'Add as file',
                                        'dependency' => 'Include as dependency',
                                        'discard'    => 'Discard',
                                       );
     if ($is_dir) {
-        $choices{'display'} = &mt('Add as Folder'); 
+        $choices{'display'} = &mt('Add as folder'); 
     }
-    my $output = &start_data_table_row()."\n";
+    my $output = &start_data_table_row().'<td align="right">'.$count.'</td>'."\n";
+    my $offset = 0;
     foreach my $action ('display','dependency','discard') {
+        $offset ++;
+        if ($action ne 'display') {
+            $offset ++;
+        }  
         $output .= '<td><span class="LC_nobreak">'.
                    '<label><input type="radio" name="archive_'.$count.
                    '" id="archive_'.$action.'_'.$count.'" value="'.$action.'"';
@@ -9992,10 +10854,26 @@ sub archive_row {
         if ($is_dir) {
             $output .= ' onclick="javascript:propagateCheck(this.form,'."'$count'".');"';
             if ($action eq 'display') {
-                $text = &mt('Add as Folder');
+                $text = &mt('Add as folder');
             }
+        } else {
+            $output .= ' onclick="javascript:dependencyCheck(this.form,'."$count,$offset".');"';
+
+        }
+        $output .= ' />&nbsp;'.$choices{$action}.'</label></span>';
+        if ($action eq 'dependency') {
+            $output .= '<div id="arc_depon_'.$count.'" style="display:none;">'."\n".
+                       &mt('Used by:').'&nbsp;<select name="archive_dependent_on_'.$count.'" '.
+                       'onchange="propagateSelect(this.form,'."$count,$offset".')">'."\n".
+                       '<option value=""></option>'."\n".
+                       '</select>'."\n".
+                       '</div>';
+        } elsif ($action eq 'display') {
+            $output .= '<div id="arc_title_'.$count.'" style="display:none;">'."\n".
+                       &mt('Title:').'&nbsp;<input type="text" name="archive_title_'.$count.'" id="archive_title_'.$count.'" />'."\n".
+                       '</div>';
         }
-        $output .= ' />&nbsp;'.$choices{$action}.'</label></span></td>';
+        $output .= '</td>';
     }
     $output .= '<td><input type="hidden" name="archive_content_'.$count.'" value="'.
                &HTML::Entities::encode("$currdir/$item",'"<>&').'" />'.('&nbsp;' x 2);
@@ -10014,32 +10892,54 @@ sub archive_row {
 }
 
 sub archive_options_form {
-    my ($form,$output,$count,$hiddenelem) = @_;
-    return '<form name="'.$form.'" method="post" action="">'."\n".
-           '<input type="hidden" name="phase" value="decompress_cleanup" />'."\n".
-                    '<p>'.
-                    &mt('How should each item be incorporated in the course?').
-                    '</p>'.
-                    '<div class="LC_columnSection"><fieldset>'.
-                    '<legend>'.&mt('Content actions for all').'</legend>'.
-                    '<input type="button" value="'.&mt('Display in Contents').'" '.
-                    'onclick="javascript:checkAll(document.'.$form.",'display'".')" />'.
-                    '&nbsp;&nbsp;<input type="button" value="'.&mt('Include as dependency for a displayed item').'"'.
-                    ' onclick="javascript:checkAll(document.'.$form.",'dependency'".')" />'.
-                    '&nbsp;&nbsp;<input type="button" value="'.&mt('Discard').'"'.
-                    ' onclick="javascript:checkAll(document.'.$form.",'discard'".')" />'.
-                     '</fieldset></div>'.
+    my ($form,$display,$count,$hiddenelem) = @_;
+    my %lt = &Apache::lonlocal::texthash(
+               perm => 'Permanently remove archive file?',
+               hows => 'How should each extracted item be incorporated in the course?',
+               cont => 'Content actions for all',
+               addf => 'Add as folder/file',
+               incd => 'Include as dependency for a displayed file',
+               disc => 'Discard',
+               no   => 'No',
+               yes  => 'Yes',
+               save => 'Save',
+    );
+    my $output = <<"END";
+<form name="$form" method="post" action="">
+<p><span class="LC_nobreak">$lt{'perm'}&nbsp;
+<label>
+  <input type="radio" name="archivedelete" value="0" checked="checked" />$lt{'no'}
+</label>
+&nbsp;
+<label>
+  <input type="radio" name="archivedelete" value="1" />$lt{'yes'}</label>
+</span>
+</p>
+<input type="hidden" name="phase" value="decompress_cleanup" />
+<br />$lt{'hows'}
+<div class="LC_columnSection">
+  <fieldset>
+    <legend>$lt{'cont'}</legend>
+    <input type="button" value="$lt{'addf'}" onclick="javascript:checkAll(document.$form,'display');" /> 
+    &nbsp;&nbsp;<input type="button" value="$lt{'incd'}" onclick="javascript:checkAll(document.$form,'dependency');" />
+    &nbsp;&nbsp;<input type="button" value="$lt{'disc'}" onclick="javascript:checkAll(document.$form,'discard');" />
+  </fieldset>
+</div>
+END
+    return $output.
            &start_data_table()."\n".
-           $output."\n".
+           $display."\n".
            &end_data_table()."\n".
            '<input type="hidden" name="archive_count" value="'.$count.'" />'.
            $hiddenelem.
-           '<br /><input type="submit" name="archive_submit" value="'.&mt('Save').'" />'.
+           '<br /><input type="submit" name="archive_submit" value="'.$lt{'save'}.'" />'.
            '</form>';
 }
 
 sub archive_javascript {
-    my ($startcount,$numitems,%children) = @_;
+    my ($startcount,$numitems,$titles,$children) = @_;
+    return unless ((ref($titles) eq 'HASH') && (ref($children) eq 'HASH'));
+    my $maintitle = $env{'form.comment'};
     my $scripttag = <<START;
 <script type="text/javascript">
 // <![CDATA[
@@ -10052,6 +10952,10 @@ function checkAll(form,prefix) {
             if (idstr.test(id)) {
                 if (form.elements[i].type == 'radio') {
                     form.elements[i].checked = true;
+                    var nostart = i-$startcount;
+                    var offset = nostart%7;
+                    var count = (nostart-offset)/7;    
+                    dependencyCheck(form,count,offset);
                 }
             }
         }
@@ -10060,13 +10964,15 @@ function checkAll(form,prefix) {
 
 function propagateCheck(form,count) {
     if (count > 0) {
-        var startelement = $startcount + (count-1) * 5;
-        for (var j=1; j<4; j++) {
-            var item = startelement + j; 
-            if (form.elements[item].type == 'radio') {
-                if (form.elements[item].checked) {
-                    containerCheck(form,count,j);
-                    break;
+        var startelement = $startcount + ((count-1) * 7);
+        for (var j=1; j<6; j++) {
+            if ((j != 2) && (j != 4)) {
+                var item = startelement + j; 
+                if (form.elements[item].type == 'radio') {
+                    if (form.elements[item].checked) {
+                        containerCheck(form,count,j);
+                        break;
+                    }
                 }
             }
         }
@@ -10074,35 +10980,136 @@ function propagateCheck(form,count) {
 }
 
 numitems = $numitems
-var parents = new Array(numitems)
+var titles = new Array(numitems);
+var parents = new Array(numitems);
 for (var i=0; i<numitems; i++) {
-    parents[i] = new Array
+    parents[i] = new Array;
 }
+var maintitle = '$maintitle';
 
 START
 
-    foreach my $container (sort { $a <=> $b } (keys(%children))) {
-        my @contents = split(/:/,$children{$container});
+    foreach my $container (sort { $a <=> $b } (keys(%{$children}))) {
+        my @contents = split(/:/,$children->{$container});
         for (my $i=0; $i<@contents; $i ++) {
             $scripttag .= 'parents['.$container.']['.$i.'] = '.$contents[$i]."\n";
         }
     }
 
+    foreach my $key (sort { $a <=> $b } (keys(%{$titles}))) {
+        $scripttag .= "titles[$key] = '".$titles->{$key}."';\n";
+    }
+
     $scripttag .= <<END;
 
 function containerCheck(form,count,offset) {
     if (count > 0) {
-        var item = $startcount + ((count-1) * 5) + offset;
+        dependencyCheck(form,count,offset);
+        var item = (offset+$startcount)+7*(count-1);
         form.elements[item].checked = true;
         if(Object.prototype.toString.call(parents[count]) === '[object Array]') {
             if (parents[count].length > 0) {
                 for (var j=0; j<parents[count].length; j++) {
-                    containerCheck(form,parents[count][j],offset)
+                    containerCheck(form,parents[count][j],offset);
+                }
+            }
+        }
+    }
+}
+
+function dependencyCheck(form,count,offset) {
+    if (count > 0) {
+        var chosen = (offset+$startcount)+7*(count-1);
+        var depitem = $startcount + ((count-1) * 7) + 4;
+        var currtype = form.elements[depitem].type;
+        if (form.elements[chosen].value == 'dependency') {
+            document.getElementById('arc_depon_'+count).style.display='block'; 
+            form.elements[depitem].options.length = 0;
+            form.elements[depitem].options[0] = new Option('Select','',true,true);
+            for (var i=1; i<count; i++) {
+                var startelement = $startcount + (i-1) * 7;
+                for (var j=1; j<6; j++) {
+                    if ((j != 2) && (j!= 4)) {
+                        var item = startelement + j;
+                        if (form.elements[item].type == 'radio') {
+                            if (form.elements[item].checked) {
+                                if (form.elements[item].value == 'display') {
+                                    var n = form.elements[depitem].options.length;
+                                    form.elements[depitem].options[n] = new Option(titles[i],i,false,false);
+                                }
+                            }
+                        }
+                    }
+                }
+            }
+        } else {
+            document.getElementById('arc_depon_'+count).style.display='none';
+            form.elements[depitem].options.length = 0;
+            form.elements[depitem].options[0] = new Option('Select','',true,true);
+        }
+        titleCheck(form,count,offset);
+    }
+}
+
+function propagateSelect(form,count,offset) {
+    if (count > 0) {
+        var item = (1+offset+$startcount)+7*(count-1);
+        var picked = form.elements[item].options[form.elements[item].selectedIndex].value; 
+        if (Object.prototype.toString.call(parents[count]) === '[object Array]') {
+            if (parents[count].length > 0) {
+                for (var j=0; j<parents[count].length; j++) {
+                    containerSelect(form,parents[count][j],offset,picked);
                 }
             }
         }
     }
 }
+
+function containerSelect(form,count,offset,picked) {
+    if (count > 0) {
+        var item = (offset+$startcount)+7*(count-1);
+        if (form.elements[item].type == 'radio') {
+            if (form.elements[item].value == 'dependency') {
+                if (form.elements[item+1].type == 'select-one') {
+                    for (var i=0; i<form.elements[item+1].options.length; i++) {
+                        if (form.elements[item+1].options[i].value == picked) {
+                            form.elements[item+1].selectedIndex = i;
+                            break;
+                        }
+                    }
+                }
+                if (Object.prototype.toString.call(parents[count]) === '[object Array]') {
+                    if (parents[count].length > 0) {
+                        for (var j=0; j<parents[count].length; j++) {
+                            containerSelect(form,parents[count][j],offset,picked);
+                        }
+                    }
+                }
+            }
+        }
+    }
+}
+
+function titleCheck(form,count,offset) {
+    if (count > 0) {
+        var chosen = (offset+$startcount)+7*(count-1);
+        var depitem = $startcount + ((count-1) * 7) + 2;
+        var currtype = form.elements[depitem].type;
+        if (form.elements[chosen].value == 'display') {
+            document.getElementById('arc_title_'+count).style.display='block';
+            if ((count==1) && ((parents[count].length > 0) || (numitems == 1))) {
+                document.getElementById('archive_title_'+count).value=maintitle;
+            }
+        } else {
+            document.getElementById('arc_title_'+count).style.display='none';
+            if (currtype == 'text') { 
+                document.getElementById('archive_title_'+count).value='';
+            }
+        }
+    }
+    return;
+}
+
 // ]]>
 </script>
 END
@@ -10115,7 +11122,7 @@ sub process_extracted_files {
     return unless ($numitems);
     my @ids=&Apache::lonnet::current_machine_ids();
     my ($prefix,$pathtocheck,$dir,$ishome,$error,$warning,%toplevelitems,%is_dir,
-        %folders,%containers,%mapinner);
+        %folders,%containers,%mapinner,%prompttofetch);
     my $docuhome = &Apache::lonnet::homeserver($docuname,$docudom);
     if (grep(/^\Q$docuhome\E$/,@ids)) {
         $prefix = &LONCAPA::propath($docudom,$docuname);
@@ -10151,19 +11158,13 @@ sub process_extracted_files {
             }
         }
     }
-    my ($output,%children,%parent);
+    my ($output,%children,%parent,%titles,%dirorder,$result);
     if (keys(%toplevelitems) > 0) {
         my @contents = sort(keys(%toplevelitems));
-        my ($count,undef) = &get_extracted($docudom,$docuname,$currdir,\%is_dir,
-                                           \%children,\%parent,\@contents);
-    }
-    my (@above,%hierarchy,%referrer,%orphaned,%todelete);
-    foreach my $depth (sort { $a <=> $b } keys(%parent)) {
-        push(@above,$parent{$depth}); 
-        foreach my $item (split(/:/,$children{$parent{$depth}})) {
-            $hierarchy{$item} = \@above;
-        }
+        (my $count,undef) = &get_extracted($docudom,$docuname,$currdir,\%is_dir,\%children,
+                                           \%parent,\@contents,\%dirorder,\%titles);
     }
+    my (%referrer,%orphaned,%todelete,%todeletedir,%newdest,%newseqid);
     if ($numitems) {
         for (my $i=1; $i<=$numitems; $i++) {
             my $path = $env{'form.archive_content_'.$i};
@@ -10171,16 +11172,25 @@ sub process_extracted_files {
                 if ($env{'form.archive_'.$i} eq 'discard') {
                     if ($prefix ne '' && $path ne '') {
                         if (-e $prefix.$path) {
-                            $todelete{$prefix.$path} = 1;
+                            if ((@archdirs > 0) && 
+                                (grep(/^\Q$i\E$/,@archdirs))) {
+                                $todeletedir{$prefix.$path} = 1;
+                            } else {
+                                $todelete{$prefix.$path} = 1;
+                            }
                         }
                     }
                 } elsif ($env{'form.archive_'.$i} eq 'display') {
-                    my ($title,$url,$outer);
+                    my ($docstitle,$title,$url,$outer);
                     ($title) = ($path =~ m{/([^/]+)$});
+                    $docstitle = $env{'form.archive_title_'.$i};
+                    if ($docstitle eq '') {
+                        $docstitle = $title;
+                    }
                     $outer = 0;
-                    if (ref($hierarchy{$i}) eq 'ARRAY') {
-                        if (@{$hierarchy{$i}} > 0) {
-                            foreach my $item (reverse(@{$hierarchy{$i}})) {
+                    if (ref($dirorder{$i}) eq 'ARRAY') {
+                        if (@{$dirorder{$i}} > 0) {
+                            foreach my $item (reverse(@{$dirorder{$i}})) {
                                 if ($env{'form.archive_'.$item} eq 'display') {
                                     $outer = $item;
                                     last;
@@ -10195,19 +11205,23 @@ sub process_extracted_files {
                     next if ($fatal);
                     if ((@archdirs > 0) && (grep(/^\Q$i\E$/,@archdirs))) {
                         if ($context eq 'coursedocs') {
-                            $mapinner{$i} = time; 
+                            $mapinner{$i} = time;
                             $folders{$i} = 'default_'.$mapinner{$i};
                             $containers{$i} = 'sequence';
                             my $url = '/uploaded/'.$docudom.'/'.$docuname.'/'.
                                       $folders{$i}.'.'.$containers{$i};
                             my $newidx = &LONCAPA::map::getresidx();
                             $LONCAPA::map::resources[$newidx]=
-                                $title.':'.$url.':false:normal:res';
+                                $docstitle.':'.$url.':false:normal:res';
                             push(@LONCAPA::map::order,$newidx);
                             my ($outtext,$errtext) =
                                 &LONCAPA::map::storemap('/uploaded/'.$docudom.'/'.
                                                         $docuname.'/'.$folders{$outer}.
                                                         '.'.$containers{$outer},1);
+                            $newseqid{$i} = $newidx;
+                            unless ($errtext) {
+                                $result .=  '<li>'.&mt('Folder: [_1] added to course',$docstitle).'</li>'."\n";
+                            }
                         }
                     } else {
                         if ($context eq 'coursedocs') {
@@ -10223,30 +11237,104 @@ sub process_extracted_files {
                             }
                             if (-e "$prefix$dir/$docstype/$mapinner{$outer}/$newidx") {
                                 system("mv $prefix$path $prefix$dir/$docstype/$mapinner{$outer}/$newidx/$title");
+                                $newdest{$i} = "$prefix$dir/$docstype/$mapinner{$outer}/$newidx";
+                                unless ($ishome) {
+                                    my $fetch = "$newdest{$i}/$title";
+                                    $fetch =~ s/^\Q$prefix$dir\E//;
+                                    $prompttofetch{$fetch} = 1;
+                                }
                             }
                             $LONCAPA::map::resources[$newidx]=
-                                $title.':'.$url.':false:normal:res';
+                                $docstitle.':'.$url.':false:normal:res';
                             push(@LONCAPA::map::order, $newidx);
                             my ($outtext,$errtext)=
                                 &LONCAPA::map::storemap('/uploaded/'.$docudom.'/'.
                                                         $docuname.'/'.$folders{$outer}.
                                                         '.'.$containers{$outer},1);
+                            unless ($errtext) {
+                                if (-e "$prefix$dir/$docstype/$mapinner{$outer}/$newidx/$title") {
+                                    $result .= '<li>'.&mt('File: [_1] added to course',$docstitle).'</li>'."\n";
+                                }
+                            }
                         }
                     }
                 } elsif ($env{'form.archive_'.$i} eq 'dependency') {
-                    if (ref($hierarchy{$i}) eq 'ARRAY') {
-                        foreach my $item (reverse(@{$hierarchy{$i}})) {
-                            if ($env{'form.archive_'.$item} eq 'display') {
-                                $referrer{$i} = $item;
-                                last;
-                                #FIXME identify as dependency in db file
-                                #FIXME need to move item to referrer location
-                                #FIXME need to setup httprefs so access allowed
-                            } elsif ($env{'form.archive_'.$item} eq 'discard') {
-                                $orphaned{$i} = $item;
-                                last;
+                    my ($title) = ($path =~ m{/([^/]+)$});
+                    $referrer{$i} = $env{'form.archive_dependent_on_'.$i};
+                    if ($env{'form.archive_'.$referrer{$i}} eq 'display') {
+                        if (ref($dirorder{$i}) eq 'ARRAY') {
+                            my ($itemidx,$fullpath,$relpath);
+                            for (my $j=0; $j<@{$dirorder{$i}}; $j++) {
+                                if (ref($dirorder{$referrer{$i}}) eq 'ARRAY') {
+                                    my $container = $dirorder{$referrer{$i}}->[-1];
+                                    for (my $j=0; $j<@{$dirorder{$i}}; $j++) {
+                                        if ($dirorder{$i}->[$j] eq $container) {
+                                            $itemidx = $j;
+                                        }
+                                    }
+                                }
+                            }
+                            if ($itemidx ne '') {
+                                if (grep(/^\Q$referrer{$i}\E$/,@archdirs)) {
+                                    if ($mapinner{$referrer{$i}}) {
+                                        $fullpath = "$prefix$dir/$docstype/$mapinner{$referrer{$i}}";
+                                        for (my $j=$itemidx; $j<@{$dirorder{$i}}; $j++) {
+                                            if (grep(/^\Q$dirorder{$i}->[$j]\E$/,@archdirs)) {
+                                                unless (defined($newseqid{$dirorder{$i}->[$j]})) {
+                                                    $fullpath .= '/'.$titles{$dirorder{$i}->[$j]};
+                                                    $relpath .= '/'.$titles{$dirorder{$i}->[$j]};
+                                                    if (!-e $fullpath) {
+                                                        mkdir($fullpath,0755);
+                                                    }
+                                                }
+                                            } else {
+                                                last;
+                                            }
+                                        }
+                                    }
+                                } elsif ($newdest{$referrer{$i}}) {
+                                    $fullpath = $newdest{$referrer{$i}};
+                                    for (my $j=$itemidx; $j<@{$dirorder{$i}}; $j++) {
+                                        if ($env{'form.archive_'.$dirorder{$i}->[$j]} eq 'discard') {
+                                            $orphaned{$i} = $env{'form.archive_'.$dirorder{$i}->[$j]};
+                                            last;
+                                        } elsif (grep(/^\Q$dirorder{$i}->[$j]\E$/,@archdirs)) {
+                                            unless (defined($newseqid{$dirorder{$i}->[$j]})) {
+                                                $fullpath .= '/'.$titles{$dirorder{$i}->[$j]};
+                                                $relpath .= '/'.$titles{$dirorder{$i}->[$j]};
+                                                if (!-e $fullpath) {
+                                                    mkdir($fullpath,0755);
+                                                }
+                                            }
+                                        } else {
+                                            last;
+                                        }
+                                    }
+                                }
+                                if ($fullpath ne '') {
+                                    if (-e "$prefix$path") {
+                                        system("mv $prefix$path $fullpath/$title");
+                                    }
+                                    if (-e "$fullpath/$title") {
+                                        my $showpath;
+                                        if ($relpath ne '') {
+                                            $showpath = "$relpath/$title";
+                                        } else {
+                                            $showpath = "/$title";
+                                        } 
+                                        $result .= '<li>'.&mt('[_1] included as a dependency',$showpath).'</li>'."\n";
+                                    } 
+                                    unless ($ishome) {
+                                        my $fetch = "$fullpath/$title";
+                                        $fetch =~ s/^\Q$prefix$dir\E//; 
+                                        $prompttofetch{$fetch} = 1;
+                                    }
+                                }
                             }
                         }
+                    } elsif ($env{'form.archive_'.$referrer{$i}} eq 'discard') {
+                        $warning .= &mt('[_1] is a dependency of [_2], which was discarded.',
+                                        $path,$env{'form.archive_content_'.$referrer{$i}}).'<br />';
                     }
                 }
             } else {
@@ -10256,9 +11344,36 @@ sub process_extracted_files {
         if (keys(%todelete)) {
             foreach my $key (keys(%todelete)) {
                 unlink($key);
-                unless ($ishome) {
-                    #FIXME Need to notify homeserver to delete files.
-                }
+            }
+        }
+        if (keys(%todeletedir)) {
+            foreach my $key (keys(%todeletedir)) {
+                rmdir($key);
+            }
+        }
+        foreach my $dir (sort(keys(%is_dir))) {
+            if (($pathtocheck ne '') && ($dir ne ''))  {
+                &cleanup_empty_dirs($prefix."$pathtocheck/$dir");
+            }
+        }
+        if ($result ne '') {
+            $output .= '<ul>'."\n".
+                       $result."\n".
+                       '</ul>';
+        }
+        unless ($ishome) {
+            my $replicationfail;
+            foreach my $item (keys(%prompttofetch)) {
+                my $fetchresult= &Apache::lonnet::reply('fetchuserfile:'.$item,$docuhome);
+                unless ($fetchresult eq 'ok') {
+                    $replicationfail .= '<li>'.$item.'</li>'."\n";
+                }
+            }
+            if ($replicationfail) {
+                $output .= '<p class="LC_error">'.
+                           &mt('Course home server failed to retrieve:').'<ul>'.
+                           $replicationfail.
+                           '</ul></p>';
             }
         }
     } else {
@@ -10274,6 +11389,90 @@ sub process_extracted_files {
     return $output;
 }
 
+sub cleanup_empty_dirs {
+    my ($path) = @_;
+    if (($path ne '') && (-d $path)) {
+        if (opendir(my $dirh,$path)) {
+            my @dircontents = grep(!/^\./,readdir($dirh));
+            my $numitems = 0;
+            foreach my $item (@dircontents) {
+                if (-d "$path/$item") {
+                    &recurse_dirs("$path/$item");
+                    if (-e "$path/$item") {
+                        $numitems ++;
+                    }
+                } else {
+                    $numitems ++;
+                }
+            }
+            if ($numitems == 0) {
+                rmdir($path);
+            }
+            closedir($dirh);
+        }
+    }
+    return;
+}
+
+=pod
+
+=item &get_folder_hierarchy()
+
+Provides hierarchy of names of folders/sub-folders containing the current
+item,
+
+Inputs: 3
+     - $navmap - navmaps object
+
+     - $map - url for map (either the trigger itself, or map containing
+                           the resource, which is the trigger).
+
+     - $showitem - 1 => show title for map itself; 0 => do not show.
+
+Outputs: 1 @pathitems - array of folder/subfolder names.
+
+=cut
+
+sub get_folder_hierarchy {
+    my ($navmap,$map,$showitem) = @_;
+    my @pathitems;
+    if (ref($navmap)) {
+        my $mapres = $navmap->getResourceByUrl($map);
+        if (ref($mapres)) {
+            my $pcslist = $mapres->map_hierarchy();
+            if ($pcslist ne '') {
+                my @pcs = split(/,/,$pcslist);
+                foreach my $pc (@pcs) {
+                    if ($pc == 1) {
+                        push(@pathitems,&mt('Main Course Documents'));
+                    } else {
+                        my $res = $navmap->getByMapPc($pc);
+                        if (ref($res)) {
+                            my $title = $res->compTitle();
+                            $title =~ s/\W+/_/g;
+                            if ($title ne '') {
+                                push(@pathitems,$title);
+                            }
+                        }
+                    }
+                }
+            }
+            if ($showitem) {
+                if ($mapres->{ID} eq '0.0') {
+                    push(@pathitems,&mt('Main Course Documents'));
+                } else {
+                    my $maptitle = $mapres->compTitle();
+                    $maptitle =~ s/\W+/_/g;
+                    if ($maptitle ne '') {
+                        push(@pathitems,$maptitle);
+                    }
+                }
+            }
+        }
+    }
+    return @pathitems;
+}
+
 =pod
 
 =item * &get_turnedin_filepath()
@@ -12419,7 +13618,7 @@ sub init_user_environment {
 
 # See if old ID present, if so, remove
 
-    my ($filename,$cookie,$userroles);
+    my ($filename,$cookie,$userroles,$firstaccenv,$timerintenv);
     my $now=time;
 
     if ($public) {
@@ -12457,7 +13656,8 @@ sub init_user_environment {
     
 # Initialize roles
 
-	$userroles=&Apache::lonnet::rolesinit($domain,$username,$authhost);
+	($userroles,$firstaccenv,$timerintenv) = 
+            &Apache::lonnet::rolesinit($domain,$username,$authhost);
     }
 # ------------------------------------ Check browser type and MathML capability
 
@@ -12532,12 +13732,18 @@ sub init_user_environment {
         }
 
 	$env{'user.environment'} = "$lonids/$cookie.id";
-	
+
 	if (tie(my %disk_env,'GDBM_File',"$lonids/$cookie.id",
 		 &GDBM_WRCREAT(),0640)) {
 	    &_add_to_env(\%disk_env,\%initial_env);
 	    &_add_to_env(\%disk_env,\%userenv,'environment.');
 	    &_add_to_env(\%disk_env,$userroles);
+            if (ref($firstaccenv) eq 'HASH') {
+                &_add_to_env(\%disk_env,$firstaccenv);
+            }
+            if (ref($timerintenv) eq 'HASH') {
+                &_add_to_env(\%disk_env,$timerintenv);
+            }
 	    if (ref($args->{'extra_env'})) {
 		&_add_to_env(\%disk_env,$args->{'extra_env'});
 	    }
@@ -12573,7 +13779,9 @@ sub get_symb {
     my $symb=($env{'form.symb'} ne '' ? $env{'form.symb'} : (&Apache::lonnet::symbread($url)));
     if ($symb eq '') {
         if (!$silent) {
-            $request->print("Unable to handle ambiguous references:$url:.");
+            if (ref($request)) { 
+                $request->print("Unable to handle ambiguous references:$url:.");
+            }
             return ();
         }
     }