--- loncom/interface/portfolio.pm	2010/10/23 19:28:12	1.225
+++ loncom/interface/portfolio.pm	2011/05/27 18:55:54	1.232
@@ -1,7 +1,7 @@
 # The LearningOnline Network
 # portfolio browser
 #
-# $Id: portfolio.pm,v 1.225 2010/10/23 19:28:12 raeburn Exp $
+# $Id: portfolio.pm,v 1.232 2011/05/27 18:55:54 raeburn Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -303,7 +303,7 @@ sub display_directory {
     my %access_controls = &Apache::lonnet::get_access_controls($current_permissions,$group);
     my $now = time;
     if ($env{"form.mode"} eq 'selectfile') {
-        &select_files($r);
+        &select_files($r,$dir_list);
         $checked_files =&Apache::lonnet::files_in_path($uname,$env{'form.currentpath'});
         $select_mode = 'true';
     }
@@ -396,6 +396,7 @@ sub display_directory {
     	    push(@dir_lines, [$filename,$dom,$testdir,$size,$mtime,$obs]);
     	}
     }
+    my $zerobyte;
     foreach my $dir_line (@dir_lines) {
         my ($filename,$dom,$testdir,$size,$mtime,$obs) = @$dir_line;
         my ($fname,$version,$extension) = &Apache::grades::file_name_version_ext($filename);
@@ -455,11 +456,16 @@ sub display_directory {
 		my $css_class = 'LC_browser_file';
 		my $line;
                 if ($select_mode eq 'true') {
-                    $line='<td><input type="checkbox" name="checkfile" value="'.$filename.'"';
-		    if ($$checked_files{$filename} eq 'selected') {
-                        $line.=' checked="checked" ';
+                    if ($size > 0) {
+                        $line='<td><input type="checkbox" name="checkfile" value="'.$filename.'"';
+		        if ($$checked_files{$filename} eq 'selected') {
+                            $line.=' checked="checked" ';
+                        }
+		        $line.=' /></td>';
+                    } else {
+                        $line = '<td>&nbsp;</td>';
+                        $zerobyte ++;
                     }
-		    $line.=' /></td>';
                 } else {
                     if (exists $locked_files{$fullpath}) {
                         my %anchor_fields = (
@@ -539,7 +545,11 @@ sub display_directory {
         }
     }
     if ($select_mode eq 'true') {
-        $r->print(&Apache::loncommon::end_data_table().'
+        $r->print(&Apache::loncommon::end_data_table());
+        if ($zerobyte) {
+            $r->print('<p class="LC_warning">'.&mt('[quant,_1,file] in list not selectable as file size is 0 bytes.',$zerobyte).'</p>');
+        }
+        $r->print('
             <input type="hidden" name="continue" value="true" />
             <input type="hidden" name="fieldname" value="'.$env{'form.fieldname'}.'" />
             <input type="hidden" name="mode" value="selectfile" />
@@ -1854,13 +1864,24 @@ END_SCRIPT
 }
 
 sub select_files {
-    my ($r) = @_;
+    my ($r,$dir_list) = @_;
     if ($env{'form.continue'} eq 'true') {
         # here we update the selections for the currentpath
         # eventually, have to handle removing those not checked, but . . . 
         my @items=&Apache::loncommon::get_env_multiple('form.checkfile');
         if (scalar(@items)){
-             &Apache::lonnet::save_selected_files($env{'user.name'}, $env{'form.currentpath'}, @items);
+            my @ok_items;
+            if (ref($dir_list) eq 'ARRAY') {
+                foreach my $dir_line (@{$dir_list}) {
+                    my ($filename,undef,undef,undef,undef,undef,undef,undef,$size)=split(/\&/,$dir_line,10);
+                    if (grep(/^\Q$filename\E$/,@items)) {
+                        if ($size) {
+                            push(@ok_items,$filename); 
+                        }
+                    }
+                }
+            }
+            &Apache::lonnet::save_selected_files($env{'user.name'}, $env{'form.currentpath'}, @ok_items);
         }
     } else {
             #empty the file for a fresh start
@@ -1915,60 +1936,263 @@ ENDSMP
 
 sub upload {
     my ($r,$url,$group)=@_;
-    my $fname=&Apache::lonnet::clean_filename($env{'form.uploaddoc.filename'});
+    my $formname = 'uploaddoc';
+    my $fname = &Apache::lonnet::clean_filename($env{'form.'.$formname.'.filename'});
+    my ($state,$msg);
+    if ($fname eq '') {
+        my $msg = &mt('Invalid filename: [_1]; the name of the uploaded file did not contain any letters, '.
+                      'so after eliminating special characters there was nothing left.',
+                      '<span class="LC_filename">'.$env{'form.uploaddoc.filename'}.'</span>'); 
+        $r->print($msg.&done('Back',$url));
+        return;
+    }
     my $disk_quota = &get_quota($group);
     my $portfolio_root = &get_portfolio_root();
     my $port_path = &get_port_path();
     my ($uname,$udom) = &get_name_dom($group);
     my $getpropath = 1;
     my $current_disk_usage = &Apache::lonnet::diskusage($udom,$uname,$portfolio_root,$getpropath);
-    my ($state,$msg) = 
+    ($state,$msg) = 
         &Apache::loncommon::check_for_upload($env{'form.currentpath'},$fname,
-		                             $group,'uploaddoc',$portfolio_root,
+		                             $group,$formname,$portfolio_root,
                                              $port_path,$disk_quota,
                                              $current_disk_usage,$uname,$udom);
     if ($state eq 'will_exceed_quota'
 	|| $state eq 'file_locked'
-	|| $state eq 'file_exists' ) {
+        || $state eq 'zero_bytes') {
 	$r->print($msg.&done('Back',$url));
 	return;
     }
 
-    my (%allfiles,%codebase,$mode);
-    if ($env{'form.uploaddoc.filename'} =~ m/(\.htm|\.html|\.shtml)$/i) {
+    my (%allfiles,%codebase,$mode,$mimetype);
+    if ($env{'form.'.$formname.'.filename'} =~ m/(\.htm|\.html|\.shtml)$/i) {
         if ($env{'form.parserflag'}) {
 	    $mode = 'parse';
         }
     }
-    my $result=
-	&Apache::lonnet::userfileupload('uploaddoc','',
-					$port_path.$env{'form.currentpath'},
-					$mode,\%allfiles,\%codebase);
-    if ($result !~ m|^/uploaded/|) {
+    my $context;
+    if ($state eq 'existingfile') {
+        $context = $state;
+    }
+    my $subdir = $port_path.$env{'form.currentpath'};
+    $subdir =~ s{(/)$}{};
+    my ($result,$timestamp) =
+	&Apache::lonnet::userfileupload($formname,$context,$subdir,
+					$mode,\%allfiles,\%codebase,undef,undef,
+                                        undef,undef,undef,undef,\$mimetype);
+    if ($state eq 'existingfile') {
+        my $group_elem;
+        my $rootdir = $r->dir_config('lonDaemons').'/tmp/overwrites';
+        if ($group eq '') {
+            $rootdir .= '/'.$env{'user.domain'}.'/'.$env{'user.name'};
+        } else {
+            $rootdir .= '/'.$env{'course.'.$env{'request.course.id'}.'.domain'}.
+                        '/'.$env{'course.'.$env{'request.course.id'}.'.num'};
+            $group_elem = '<input type="hidden" name="group" value="'.$group.'" />';
+        }
+        if (($result eq $rootdir.'/'.$port_path.$env{'form.currentpath'}.$fname) && ($timestamp =~ /^\d+$/)) {
+            my $showfname = &HTML::Entities::encode($fname,'&<>"');
+            my %lt = &Apache::lonlocal::texthash (
+                                                   over => 'Overwrite existing file?',
+                                                   yes  => 'Yes',
+                                                   no   => 'No',
+                                                   undo => 'This action can not be undone.',
+                                                   conf => 'Are you sure you want to overwrite an existing file?',
+                                                   cont => 'Continue',
+                                                 );
+            my $parserflag;
+            my $hidden = &hidden_elems();
+            if ($mode eq 'parse') {
+                $parserflag = '<input type="hidden" name="parserflag" value="1" />';
+            }
+            $r->print(<<"END");
+<script type="text/javascript">
+// <![CDATA[
+function confirmOverwrite() {
+    var chosen;
+    if (document.existingfile.overwrite.length) {
+        for (var i=0; i<document.existingfile.overwrite.length; i++) {
+            if (document.existingfile.overwrite[i].checked) {
+                chosen = document.existingfile.overwrite[i].value;
+            }
+        }
+    }
+    if (chosen == 1) {
+        if (confirm('$lt{'conf'}')) {
+            document.existingfile.action.value = "process_overwrite";
+            return true;
+        } else {
+            document.existingfile.action.value = "cancel_overwrite";
+            if (document.existingfile.overwrite.length) {
+                for (var i=0; i<document.existingfile.overwrite.length; i++) {
+                    if (document.existingfile.overwrite[i].value == "0") {
+                        document.existingfile.overwrite[i].checked = true;
+                    }
+                }
+            }
+            return false;
+        }
+    } else {
+        document.existingfile.action.value = "cancel_overwrite";
+        return true;
+    }
+}
+// ]]>
+</script>
+$msg
+<br /><div class="LC_warning"><form method="post" action="$url" name="existingfile" onsubmit="return confirmOverwrite();">
+<span class="LC_nobreak">$lt{'over'}
+<label><input type="radio" name="overwrite" value="1" />
+$lt{'yes'}</label>&nbsp;
+<label><input type="radio" name="overwrite" value="0" checked="checked" />$lt{'no'}</label></span>
+<input type="hidden" name="action" value="cancel_overwrite" />
+<input type="hidden" name="filename" value="$showfname" />
+<input type="hidden" name="timestamp" value="$timestamp" />
+$hidden
+$parserflag
+$group_elem
+<br /><br />
+<input type="submit" name="process" value="$lt{'cont'}" />
+</form></div>
+END
+        } else {
+            $r->print('<span class="LC_error">'.&mt('An error occurred ([_1]) while trying to upload [_2].'
+                      ,$result,&display_file(undef,$fname)).'</span><br />');
+            $r->print(&done('Back',$url));
+        }
+    } elsif ($result !~ m|^/uploaded/|) {
 	$r->print('<span class="LC_error">'.&mt('An error occurred ([_1]) while trying to upload [_2].'
-                  ,$result,&display_file()).'</span><br />');
+                  ,$result,&display_file(undef,$fname)).'</span><br />');
 	$r->print(&done('Back',$url));
     } else {
-	if (%allfiles) {
-            if (!&suppress_embed_prompt()) {
-	        my $state = <<STATE;
-    <input type="hidden" name="action"      value="upload_embedded" />
-    <input type="hidden" name="currentpath" value="$env{'form.currentpath'}" />
-    <input type="hidden" name="fieldname"   value="$env{'form.fieldname'}" />
-    <input type="hidden" name="mode"        value="$env{'form.mode'}" />
-STATE
-                $r->print("<h2>".&mt("Reference Warning")."</h2>");
-                $r->print("<p>".&mt("Completed upload of the file. This file contained references to other files. You must upload the referenced files or else the uploaded file may not work properly.")."</p>");
-                $r->print("<p>".&mt("Please select the locations from which the referenced files are to be uploaded.")."</p>");
-	        $r->print(&Apache::loncommon::ask_for_embedded_content('/adm/portfolio',$state,\%allfiles,\%codebase,
-				      {'error_on_invalid_names'   => 1,
-				       'ignore_remote_references' => 1,}));
-	        $r->print('<p>Or '.&done('Return to directory',$url).'</p>');
+        if (!&suppress_embed_prompt()) {
+            if ($mimetype eq 'text/html') {
+	        if (keys(%allfiles) > 0) {
+                    &print_dependency_form($r,$url,\%allfiles,\%codebase,$result);
+                    return;
+	        } else {
+                    $r->print('<p>'.&mt('Completed upload of the file.').'<br />'.
+                              &mt('No embedded items identified.').'</p>');
+                }
             }
-	} else {
-	    $r->print(&done(undef,$url));
-	}
+        }
+	$r->print(&done(undef,$url));
     }
+    return;
+}
+
+sub hidden_elems {
+    my $contelem;
+    if ($env{'form.mode'} eq 'selectfile') {
+        $contelem = '<input type="hidden" name="continue" value="true" />';
+    }
+    return <<END;
+<input type="hidden" name="currentpath" value="$env{'form.currentpath'}" />
+<input type="hidden" name="fieldname" value="$env{'form.fieldname'}" />
+<input type="hidden" name="mode" value="$env{'form.mode'}" />
+<input type="hidden" name="showversions" value="$env{'form.showversions'}" />
+$contelem
+END
+}
+
+sub print_dependency_form {
+    my ($r,$url,$allfiles,$codebase,$result) = @_;
+    my $container = &HTML::Entities::encode($result,'<>"&');
+    my $state = &embedded_form_elems($container);
+    my ($embedded,$num,$pathchg) = &Apache::loncommon::ask_for_embedded_content($url,$state,$allfiles,$codebase,
+                                  {'error_on_invalid_names'   => 1,
+                                   'ignore_remote_references' => 1,});
+    if ($embedded) {
+        if ($num || $pathchg) {
+            $r->print('<h3>'.&mt("Reference Warning").'</h3>');
+        } else {
+            $r->print('<h3>'.&mt("Reference Information").'</h3>');
+        }
+        if ($num) {
+            $r->print('<p>'.&mt("Completed upload of the file. This file contained references to other files. You must upload the referenced files or else the uploaded file may not work properly.").'</p>'.
+                      '<p>'.&mt("Please select the locations from which the referenced files are to be uploaded.").'</p>'.
+                       $embedded.
+                       '<p>'.&mt('or').'</p>'.&done('Return to directory',$url));
+        } else {
+            $r->print('<p>'.&mt("Completed upload of the file. This file contained references to other files.").'</p>'.
+                      $embedded.
+                      '<p>'.&done('Return to directory',$url).'</p>');
+        }
+    } else {
+        $r->print(&done(undef,$url));
+    }
+    return;
+}
+
+sub overwrite {
+    my ($r,$url,$group)=@_;
+    my $formname = 'existingfile';
+    my $port_path = &get_port_path();
+    my $fname = &Apache::lonnet::clean_filename($env{'form.filename'});
+    my (%allfiles,%codebase,$mode,$mimetype);
+    unless (&suppress_embed_prompt()) {
+        if ($env{'form.parserflag'}) {
+            if ($fname =~ /\.s?html?$/i) {
+                $mode = 'parse';
+            }
+        }
+    }
+    if ($fname eq '') {
+        my $msg = &mt('Invalid filename: [_1]; the name of the uploaded file did not contain any letters, '.
+                      'so after eliminating special characters there was nothing left.',
+                      '<span class="LC_filename">'.$env{'form.filename'}.'</span>');
+        $r->print($msg.&done('Back',$url));
+        return;
+    }
+    $env{'form.'.$formname.'.filename'} = $fname;
+    my $subdir = $port_path.$env{'form.currentpath'};
+    $subdir =~ s{(/)$}{};
+    my $result=
+        &Apache::lonnet::userfileupload($formname,'overwrite',$subdir,$mode,
+                                        \%allfiles,\%codebase,undef,undef,undef,
+                                        undef,undef,undef,\$mimetype);
+    if ($result !~ m|^/uploaded/|) {
+        $r->print('<span class="LC_error">'.&mt('An error occurred ([_1]) while trying to overwrite [_2].'
+                  ,$result,&display_file(undef,$fname)).'</span><br />');
+        $r->print(&after_overwrite(&mt('Back'),$url));
+    } else {
+        if ($mode eq 'parse') {
+            if ($mimetype eq 'text/html') {
+                if (keys(%allfiles) > 0) {
+                    &print_dependency_form($r,$url,\%allfiles,\%codebase,$result);
+                    return;
+                } else {
+                    $r->print('<p>'.&mt('Overwriting completed.').'<br />'.
+                              &mt('No embedded items identified.').'</p>');
+                }
+            }
+        }
+        $r->print(&after_overwrite(undef,$url));
+    }
+    return;
+}
+
+sub after_overwrite {
+    my ($text,$url) = @_;
+    my $group_elem;
+    if (defined($env{'form.group'})) {
+        $group_elem = '<input type="hidden" name="group" value="'.$env{'form.group'}.'" />';
+        if (defined($env{'form.ref'})) {
+            $group_elem .= '<input type="hidden" name="ref" value="'.$env{'form.ref'}.'" />'."\n";
+        }
+    }
+    if ($text eq '') {
+        $text = &mt('Done');
+    }
+    my $hidden = &hidden_elems();
+    return <<END;
+
+<h3><a href="javascript:document.overwritedone.submit();">$text</a></h3>
+<form name="overwritedone" method="post" action="$url" />
+$hidden
+$group_elem
+</form>
+END
 }
 
 sub lock_info {
@@ -2165,7 +2389,6 @@ sub missing_priv {
     }
     $rtnlink .= '">'.&mt('Return to directory').'</a>';
     $r->print('<br />'.$rtnlink);
-    $r->print(&Apache::loncommon::end_page());
     return;
 }
 
@@ -2220,6 +2443,19 @@ sub suppress_embed_prompt {
     return $suppress_prompt;
 }
 
+sub embedded_form_elems {
+    my ($container) = @_;
+    my $state = <<STATE;
+    <input type="hidden" name="currentpath" value="$env{'form.currentpath'}" />
+    <input type="hidden" name="fieldname" value="$env{'form.fieldname'}" />
+    <input type="hidden" name="mode" value="$env{'form.mode'}" />
+    <input type="hidden" name="container" value="$container" />
+STATE
+    if ($env{'form.group'} ne '') {
+        $state .= '<input type="hidden" name="group" value="'.$env{'form.group'}.'" />'."\n";
+    }
+    return $state;
+}
 
 sub handler {
     # this handles file management
@@ -2337,36 +2573,49 @@ sub handler {
          $r->print(&Apache::loncommon::end_page());
          return OK;
     }
-	if (($env{'form.storeupl'}) & (!$env{'form.uploaddoc.filename'})){
-   	    $r->print('<span class="LC_error">');
-   	    $r->print(&mt('No file was selected to upload.').' ');
-	    $r->print(&mt('To upload a file, click <strong>Browse...</strong> and select a file, then click <strong>Upload</strong>.'));
-	    $r->print('</span>');
-	}
+    if (($env{'form.storeupl'}) & (!$env{'form.uploaddoc.filename'})){
+   	$r->print('<span class="LC_error">');
+   	$r->print(&mt('No file was selected to upload.').' ');
+	$r->print(&mt('To upload a file, click <strong>Browse...</strong> and select a file, then click <strong>Upload</strong>.'));
+	$r->print('</span>');
+    }
     if ($env{'form.meta'}) {
         &open_form($r,$url);
         $r->print(&mt('Edit the meta data').'<br />');
         &close_form($r,$url);
     }
-    if ($env{'form.store'}) {
-    }
-
     if ($env{'form.uploaddoc.filename'}) {
         if ($can_upload) {
 	    &upload($r,$url,$group);
         } else {
             &missing_priv($r,$url,'upload');
         }
+    } elsif ($env{'form.action'} eq 'process_overwrite') {
+        if ($can_upload) {
+            &overwrite($r,$url,$group);
+        } else {
+            &missing_priv($r,$url,'existingfile');
+        }
     } elsif ($env{'form.action'} eq 'upload_embedded') {
 	if ($can_upload) {
             my $disk_quota = &get_quota($group);
             my $getpropath = 1;
             my $current_disk_usage = 
                 &Apache::lonnet::diskusage($udom,$uname,$portfolio_root,$getpropath);
-	    $r->print(
+            my $container = &HTML::Entities::encode($env{'form.container'},'<>&"');
+            my $state = &embedded_form_elems($container).
+                        '<input type="hidden" name="action" value="modify_orightml" />';
+	    my ($result,$flag) =
                 &Apache::loncommon::upload_embedded('portfolio',$port_path,$uname,$udom,
-                    $group,$portfolio_root,$group,$disk_quota,$current_disk_usage));
-            $r->print(&done(undef,$url));
+                    $group,$portfolio_root,$group,$disk_quota,$current_disk_usage,$state,$url);
+            $r->print($result.&done('Return to directory',$url));
+        } else {
+            &missing_priv($r,$url,'upload');
+        }
+    } elsif ($env{'form.action'} eq 'modify_orightml') {
+        if ($can_upload) {
+            $r->print(&Apache::loncommon::modify_html_refs('portfolio',$port_path,$uname,$udom,$group,$portfolio_root,$group));
+            $r->print(&done('Return to directory',$url));
         } else {
             &missing_priv($r,$url,'upload');
         }
@@ -2436,6 +2685,16 @@ sub handler {
     } elsif ($env{'form.lockinfo'}) {
         &lock_info($r,$url,$group);
     } else {
+        if ($env{'form.action'} eq 'cancel_overwrite') {
+            if ($can_upload) {
+                my $formname = 'existingfile';
+                my $fname = &Apache::lonnet::clean_filename($env{'form.filename'});
+                $env{'form.'.$formname.'.filename'} = $fname;
+                my $subdir = $port_path.$env{'form.currentpath'};
+                $subdir =~ s{(/)$}{};
+                &Apache::lonnet::userfileupload($formname,'canceloverwrite',$subdir);
+            }
+        }
 	my $current_path='/';
 	if ($env{'form.currentpath'}) {
 	    $current_path = $env{'form.currentpath'};
@@ -2468,8 +2727,8 @@ sub handler {
 			$can_upload,$group);
         &display_directory($r,$url,$current_path,$is_empty,\@dir_list,$group,
                            $can_upload,$can_modify,$can_delete,$can_setacl);
-	$r->print(&Apache::loncommon::end_page());
     }
+    $r->print(&Apache::loncommon::end_page());
     return OK;
 }