--- loncom/lonnet/perl/lonnet.pm	2010/08/17 22:22:05	1.1081
+++ loncom/lonnet/perl/lonnet.pm	2011/07/31 22:55:53	1.1121
@@ -1,7 +1,7 @@
 # The LearningOnline Network
 # TCP networking package
 #
-# $Id: lonnet.pm,v 1.1081 2010/08/17 22:22:05 raeburn Exp $
+# $Id: lonnet.pm,v 1.1121 2011/07/31 22:55:53 raeburn Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -96,6 +96,8 @@ use File::MMagic;
 use LONCAPA qw(:DEFAULT :match);
 use LONCAPA::Configuration;
 
+use File::Copy;
+
 my $readit;
 my $max_connection_retries = 10;     # Or some such value.
 
@@ -195,6 +197,29 @@ sub get_server_timezone {
     }
 }
 
+sub get_server_distarch {
+    my ($lonhost,$ignore_cache) = @_;
+    if (defined($lonhost)) {
+        if (!defined(&hostname($lonhost))) {
+            return;
+        }
+        my $cachetime = 12*3600;
+        if (!$ignore_cache) {
+            my ($distarch,$cached)=&is_cached_new('serverdistarch',$lonhost);
+            if (defined($cached)) {
+                return $distarch;
+            }
+        }
+        my $rep = &reply('serverdistarch',$lonhost);
+        unless ($rep eq 'unknown_command' || $rep eq 'no_such_host' ||
+                $rep eq 'con_lost' || $rep eq 'rejected' || $rep eq 'refused' ||
+                $rep eq '') {
+            return &do_cache_new('serverdistarch',$lonhost,$rep,$cachetime);
+        }
+    }
+    return;
+}
+
 sub get_server_loncaparev {
     my ($dom,$lonhost,$ignore_cache,$caller) = @_;
     if (defined($lonhost)) {
@@ -230,7 +255,7 @@ sub get_server_loncaparev {
             if (($answer eq 'unknown_cmd') || ($answer eq 'con_lost')) {
                 if ($caller eq 'loncron') {
                     my $ua=new LWP::UserAgent;
-                    $ua->timeout(20);
+                    $ua->timeout(4);
                     my $protocol = $protocol{$lonhost};
                     $protocol = 'http' if ($protocol ne 'https');
                     my $url = $protocol.'://'.&hostname($lonhost).'/adm/about.html';
@@ -281,6 +306,44 @@ sub get_server_homeID {
     return &do_cache_new('serverhomeID',$hostname,$serverhomeID,$cachetime);
 }
 
+sub get_remote_globals {
+    my ($lonhost,$whathash,$ignore_cache) = @_;
+    my (%returnhash,%whatneeded);
+    if (ref($whathash) eq 'ARRAY') {
+        foreach my $what (sort(keys(%{$whathash}))) {
+            my $type = $whathash->{$what};
+            my $hashid = $lonhost.'-'.$what;
+            my ($result,$cached); 
+            unless ($ignore_cache) {
+                ($result,$cached)=&is_cached_new('lonnetglobal',$hashid);
+                $returnhash{$what} = $result;
+            }
+            if (defined($cached)) {
+                $returnhash{$what} = $result;
+            } else {
+                $whatneeded{$what} = $type;
+            }
+        }
+        if (keys(%whatneeded) > 0) {
+            my $requested = &freeze_escape(\%whatneeded);
+            my $rep=&reply('readlonnetglobal:'.$requested,$lonhost);
+            unless (($rep=~/^refused/) || ($rep=~/^rejected/) || $rep eq 'con_lost')) {
+                my @pairs=split(/\&/,$rep);
+                if ($rep !~ /^error/) {
+                    foreach my $item (@pairs) {
+                        my ($key,$value)=split(/=/,$item,2);
+                        my $what = &unescape($key);
+                        my $hashid = $lonhost.'-'.$what;
+                        $returnhash{$what}=&thaw_unescape($value);
+                        &do_cache_new('lonnetglobal',$hashid,$returnhash{$what},600);
+                    }
+                }
+            }
+        }
+    }
+    return %returnhash;
+}
+
 # -------------------------------------------------- Non-critical communication
 sub subreply {
     my ($cmd,$server)=@_;
@@ -611,11 +674,20 @@ sub appenv {
 # ----------------------------------------------------- Delete from Environment
 
 sub delenv {
-    my ($delthis,$regexp) = @_;
-    if (($delthis=~/user\.role/) || ($delthis=~/user\.priv/)) {
-        &logthis("<font color=\"blue\">WARNING: ".
-                "Attempt to delete from environment ".$delthis);
-        return 'error';
+    my ($delthis,$regexp,$roles) = @_;
+    if (($delthis=~/^user\.role/) || ($delthis=~/^user\.priv/)) {
+        my $refused = 1;
+        if (ref($roles) eq 'ARRAY') {
+            my ($type,$role) = ($delthis =~ /^user\.(role|priv)\.([^.]+)\./);
+            if (grep(/^\Q$role\E$/,@{$roles})) {
+                $refused = 0;
+            }
+        }
+        if ($refused) {
+            &logthis("<font color=\"blue\">WARNING: ".
+                     "Attempt to delete from environment ".$delthis);
+            return 'error';
+        }
     }
     my $opened = open(my $env_file,'+<',$env{'user.environment'});
     if ($opened
@@ -727,13 +799,23 @@ sub userload {
 # ------------------------------ Find server with least workload from spare.tab
 
 sub spareserver {
-    my ($loadpercent,$userloadpercent,$want_server_name) = @_;
+    my ($loadpercent,$userloadpercent,$want_server_name,$udom) = @_;
     my $spare_server;
     if ($userloadpercent !~ /\d/) { $userloadpercent=0; }
     my $lowest_load=($loadpercent > $userloadpercent) ? $loadpercent 
                                                      :  $userloadpercent;
-    
+    my ($uint_dom,$remotesessions);
+    if (($udom ne '') && (&domain($udom) ne '')) {
+        my $uprimary_id = &Apache::lonnet::domain($udom,'primary');
+        $uint_dom = &Apache::lonnet::internet_dom($uprimary_id);
+        my %udomdefaults = &Apache::lonnet::get_domain_defaults($udom);
+        $remotesessions = $udomdefaults{'remotesessions'};
+    }
     foreach my $try_server (@{ $spareid{'primary'} }) {
+        if ($uint_dom) {
+             next unless (&spare_can_host($udom,$uint_dom,$remotesessions,
+                                          $try_server));
+        }
 	($spare_server, $lowest_load) =
 	    &compare_server_load($try_server, $spare_server, $lowest_load);
     }
@@ -742,6 +824,10 @@ sub spareserver {
 
     if (!$found_server) {
 	foreach my $try_server (@{ $spareid{'default'} }) {
+            if ($uint_dom) {
+                next unless (&spare_can_host($udom,$uint_dom,$remotesessions,
+                                             $try_server));
+            }
 	    ($spare_server, $lowest_load) =
 		&compare_server_load($try_server, $spare_server, $lowest_load);
 	}
@@ -754,7 +840,7 @@ sub spareserver {
         }
         if (defined($spare_server)) {
             my $hostname = &hostname($spare_server);
-            if (defined($hostname)) {  
+            if (defined($hostname)) {
 	        $spare_server = $protocol.'://'.$hostname;
             }
         }
@@ -769,7 +855,7 @@ sub compare_server_load {
     my $userloadans = &reply('userload',$try_server);
 
     if ($loadans !~ /\d/ && $userloadans !~ /\d/) {
-	return; #didn't get a number from the server
+	return ($spare_server, $lowest_load); #didn't get a number from the server
     }
 
     my $load;
@@ -815,22 +901,38 @@ sub has_user_session {
 # --------- determine least loaded server in a user's domain which allows login
 
 sub choose_server {
-    my ($udom) = @_;
+    my ($udom,$checkloginvia) = @_;
     my %domconfhash = &Apache::loncommon::get_domainconf($udom);
     my %servers = &get_servers($udom);
     my $lowest_load = 30000;
-    my ($login_host,$hostname);
+    my ($login_host,$hostname,$portal_path);
     foreach my $lonhost (keys(%servers)) {
-        my $loginvia = $domconfhash{$udom.'.login.loginvia_'.$lonhost};
-        if ($loginvia eq '') {
+        my $loginvia;
+        if ($checkloginvia) {
+            $loginvia = $domconfhash{$udom.'.login.loginvia_'.$lonhost};
+            if ($loginvia) {
+                my ($server,$path) = split(/:/,$loginvia);
+                ($login_host, $lowest_load) =
+                    &compare_server_load($server, $login_host, $lowest_load);
+                if ($login_host eq $server) {
+                    $portal_path = $path;
+                }
+            } else {
+                ($login_host, $lowest_load) =
+                    &compare_server_load($lonhost, $login_host, $lowest_load);
+                if ($login_host eq $lonhost) {
+                    $portal_path = '';
+                }
+            }
+        } else {
             ($login_host, $lowest_load) =
-            &compare_server_load($lonhost, $login_host, $lowest_load);
+                &compare_server_load($lonhost, $login_host, $lowest_load);
         }
     }
     if ($login_host ne '') {
-        $hostname = $servers{$login_host};
+        $hostname = &hostname($login_host);
     }
-    return ($login_host,$hostname);
+    return ($login_host,$hostname,$portal_path);
 }
 
 # --------------------------------------------- Try to change a user's password
@@ -971,15 +1073,19 @@ sub can_host_session {
     }
     if ($canhost) {
         if (ref($hostedsessions) eq 'HASH') {
+            my $uprimary_id = &Apache::lonnet::domain($udom,'primary');
+            my $uint_dom = &Apache::lonnet::internet_dom($uprimary_id);
             if (ref($hostedsessions->{'excludedomain'}) eq 'ARRAY') {
-                if (grep(/^\Q$udom\E$/,@{$hostedsessions->{'excludedomain'}})) {
+                if (($uint_dom ne '') && 
+                    (grep(/^\Q$uint_dom\E$/,@{$hostedsessions->{'excludedomain'}}))) {
                     $canhost = 0;
                 } else {
                     $canhost = 1;
                 }
             }
             if (ref($hostedsessions->{'includedomain'}) eq 'ARRAY') {
-                if (grep(/^\Q$udom\E$/,@{$hostedsessions->{'includedomain'}})) {
+                if (($uint_dom ne '') && 
+                    (grep(/^\Q$uint_dom\E$/,@{$hostedsessions->{'includedomain'}}))) {
                     $canhost = 1;
                 } else {
                     $canhost = 0;
@@ -990,6 +1096,26 @@ sub can_host_session {
     return $canhost;
 }
 
+sub spare_can_host {
+    my ($udom,$uint_dom,$remotesessions,$try_server)=@_;
+    my $canhost=1;
+    my @intdoms;
+    my $internet_names = &Apache::lonnet::get_internet_names($try_server);
+    if (ref($internet_names) eq 'ARRAY') {
+        @intdoms = @{$internet_names};
+    }
+    unless (grep(/^\Q$uint_dom\E$/,@intdoms)) {
+        my $serverhomeID = &Apache::lonnet::get_server_homeID($try_server);
+        my $serverhomedom = &Apache::lonnet::host_domain($serverhomeID);
+        my %defdomdefaults = &Apache::lonnet::get_domain_defaults($serverhomedom);
+        my $remoterev = &Apache::lonnet::get_server_loncaparev(undef,$try_server);
+        $canhost = &can_host_session($udom,$try_server,$remoterev,
+                                     $remotesessions,
+                                     $defdomdefaults{'hostedsessions'});
+    }
+    return $canhost;
+}
+
 # ---------------------- Find the homebase for a user from domain's lib servers
 
 my %homecache;
@@ -1699,7 +1825,8 @@ sub getsection {
     # If there is a role which has expired, return it.
     #
     $courseid = &courseid_to_courseurl($courseid);
-    my %roleshash = &dump('roles',$udom,$unam,$courseid);
+    my $extra = &freeze_escape({'skipcheck' => 1});
+    my %roleshash = &dump('roles',$udom,$unam,$courseid,undef,$extra);
     foreach my $key (keys(%roleshash)) {
         next if ($key !~/^\Q$courseid\E(?:\/)*(\w+)*\_st$/);
         my $section=$1;
@@ -1931,20 +2058,29 @@ sub getversion {
 
 sub currentversion {
     my $fname=shift;
-    my ($result,$cached)=&is_cached_new('resversion',$fname);
-    if (defined($cached)) { return $result; }
     my $author=$fname;
     $author=~s/\/home\/httpd\/html\/res\/([^\/]*)\/([^\/]*).*/$1\/$2/;
     my ($udom,$uname)=split(/\//,$author);
-    my $home=homeserver($uname,$udom);
+    my $home=&homeserver($uname,$udom);
     if ($home eq 'no_host') { 
         return -1; 
     }
-    my $answer=reply("currentversion:$fname",$home);
+    my $answer=&reply("currentversion:$fname",$home);
     if (($answer eq 'con_lost') || ($answer eq 'rejected')) {
 	return -1;
     }
-    return &do_cache_new('resversion',$fname,$answer,600);
+    return $answer;
+}
+
+#
+# Return special version number of resource if set by override, empty otherwise
+#
+sub usedversion {
+    my $fname=shift;
+    unless ($fname) { $fname=$env{'request.uri'}; }
+    my ($urlversion)=($fname=~/\.(\d+)\.\w+$/);
+    if ($urlversion) { return $urlversion; }
+    return '';
 }
 
 # ----------------------------- Subscribe to a resource, return URL if possible
@@ -2140,6 +2276,8 @@ sub allowuploaded {
 #        path to file, source of file, instruction to parse file for objects,
 #        ref to hash for embedded objects,
 #        ref to hash for codebase of java objects.
+#        reference to scalar to accommodate mime type determined
+#          from File::MMagic if $parser = parse.
 #
 # output: url to file (if action was uploaddoc), 
 #         ok if successful, or diagnostic message otherwise (if action was propagate or copy)
@@ -2166,7 +2304,8 @@ sub allowuploaded {
 #
 
 sub process_coursefile {
-    my ($action,$docuname,$docudom,$file,$source,$parser,$allfiles,$codebase)=@_;
+    my ($action,$docuname,$docudom,$file,$source,$parser,$allfiles,$codebase,
+        $mimetype)=@_;
     my $fetchresult;
     my $home=&homeserver($docuname,$docudom);
     if ($action eq 'propagate') {
@@ -2194,13 +2333,16 @@ sub process_coursefile {
             close($fh);
             if ($parser eq 'parse') {
                 my $mm = new File::MMagic;
-                my $mime_type = $mm->checktype_filename($filepath.'/'.$fname);
-                if ($mime_type eq 'text/html') {
+                my $type = $mm->checktype_filename($filepath.'/'.$fname);
+                if ($type eq 'text/html') {
                     my $parse_result = &extract_embedded_items($filepath.'/'.$fname,$allfiles,$codebase);
                     unless ($parse_result eq 'ok') {
                         &logthis('Failed to parse '.$filepath.'/'.$fname.' for embedded media: '.$parse_result);
                     }
                 }
+                if (ref($mimetype)) {
+                    $$mimetype = $type;
+                } 
             }
             $fetchresult= &reply('fetchuserfile:'.$docudom.'/'.$docuname.'/'.$file,
                                  $home);
@@ -2316,9 +2458,13 @@ sub resizeImage {
 
 # --------------- Take an uploaded file and put it into the userfiles directory
 # input: $formname - the contents of the file are in $env{"form.$formname"}
-#                    the desired filenam is in $env{"form.$formname.filename"}
-#        $coursedoc - if true up to the current course
-#                     if false
+#                    the desired filename is in $env{"form.$formname.filename"}
+#        $context - possible values: coursedoc, existingfile, overwrite, 
+#                                    canceloverwrite, or ''. 
+#                   if 'coursedoc': upload to the current course
+#                   if 'existingfile': write file to tmp/overwrites directory 
+#                   if 'canceloverwrite': delete file written to tmp/overwrites directory
+#                   $context is passed as argument to &finishuserfileupload
 #        $subdir - directory in userfile to store the file into
 #        $parser - instruction to parse file for objects ($parser = parse)    
 #        $allfiles - reference to hash for embedded objects
@@ -2329,37 +2475,60 @@ sub resizeImage {
 #        $thumbheight - height (pixels) of thumbnail to make for uploaded image
 #        $resizewidth - width (pixels) to which to resize uploaded image
 #        $resizeheight - height (pixels) to which to resize uploaded image
+#        $mimetype - reference to scalar to accommodate mime type determined
+#                    from File::MMagic if $parser = parse.
 # 
 # output: url of file in userspace, or error: <message> 
 #             or /adm/notfound.html if failure to upload occurse
 
 sub userfileupload {
-    my ($formname,$coursedoc,$subdir,$parser,$allfiles,$codebase,$destuname,
-        $destudom,$thumbwidth,$thumbheight,$resizewidth,$resizeheight)=@_;
+    my ($formname,$context,$subdir,$parser,$allfiles,$codebase,$destuname,
+        $destudom,$thumbwidth,$thumbheight,$resizewidth,$resizeheight,$mimetype)=@_;
     if (!defined($subdir)) { $subdir='unknown'; }
     my $fname=$env{'form.'.$formname.'.filename'};
     $fname=&clean_filename($fname);
-# See if there is anything left
+    # See if there is anything left
     unless ($fname) { return 'error: no uploaded file'; }
-    chop($env{'form.'.$formname});
-    if (($formname eq 'screenshot') && ($subdir eq 'helprequests')) { #files uploaded to help request form are handled differently
+    # Files uploaded to help request form, or uploaded to "create course" page are handled differently
+    if ((($formname eq 'screenshot') && ($subdir eq 'helprequests')) ||
+        (($formname eq 'coursecreatorxml') && ($subdir eq 'batchupload')) ||
+         ($context eq 'existingfile') || ($context eq 'canceloverwrite')) {
         my $now = time;
-        my $filepath = 'tmp/helprequests/'.$now;
-        my @parts=split(/\//,$filepath);
-        my $fullpath = $perlvar{'lonDaemons'};
-        for (my $i=0;$i<@parts;$i++) {
-            $fullpath .= '/'.$parts[$i];
-            if ((-e $fullpath)!=1) {
-                mkdir($fullpath,0777);
+        my $filepath;
+        if (($formname eq 'screenshot') && ($subdir eq 'helprequests')) {
+             $filepath = 'tmp/helprequests/'.$now;
+        } elsif (($formname eq 'coursecreatorxml') && ($subdir eq 'batchupload')) {
+             $filepath = 'tmp/addcourse/'.$destudom.'/web/'.$env{'user.name'}.
+                         '_'.$env{'user.domain'}.'/pending';
+        } elsif (($context eq 'existingfile') || ($context eq 'canceloverwrite')) {
+            my ($docuname,$docudom);
+            if ($destudom) {
+                $docudom = $destudom;
+            } else {
+                $docudom = $env{'user.domain'};
+            }
+            if ($destuname) {
+                $docuname = $destuname;
+            } else {
+                $docuname = $env{'user.name'};
+            }
+            if (exists($env{'form.group'})) {
+                $docuname=$env{'course.'.$env{'request.course.id'}.'.num'};
+                $docudom=$env{'course.'.$env{'request.course.id'}.'.domain'};
+            }
+            $filepath = 'tmp/overwrites/'.$docudom.'/'.$docuname.'/'.$subdir;
+            if ($context eq 'canceloverwrite') {
+                my $tempfile =  $perlvar{'lonDaemons'}.'/'.$filepath.'/'.$fname;
+                if (-e  $tempfile) {
+                    my @info = stat($tempfile);
+                    if ($info[9] eq $env{'form.timestamp'}) {
+                        unlink($tempfile);
+                    }
+                }
+                return;
             }
         }
-        open(my $fh,'>'.$fullpath.'/'.$fname);
-        print $fh $env{'form.'.$formname};
-        close($fh);
-        return $fullpath.'/'.$fname;
-    } elsif (($formname eq 'coursecreatorxml') && ($subdir eq 'batchupload')) { #files uploaded to create course page are handled differently
-        my $filepath = 'tmp/addcourse/'.$destudom.'/web/'.$env{'user.name'}.
-                       '_'.$env{'user.domain'}.'/pending';
+        # Create the directory if not present
         my @parts=split(/\//,$filepath);
         my $fullpath = $perlvar{'lonDaemons'};
         for (my $i=0;$i<@parts;$i++) {
@@ -2371,27 +2540,31 @@ sub userfileupload {
         open(my $fh,'>'.$fullpath.'/'.$fname);
         print $fh $env{'form.'.$formname};
         close($fh);
-        return $fullpath.'/'.$fname;
+        if ($context eq 'existingfile') {
+            my @info = stat($fullpath.'/'.$fname);
+            return ($fullpath.'/'.$fname,$info[9]);
+        } else {
+            return $fullpath.'/'.$fname;
+        }
     }
     if ($subdir eq 'scantron') {
         $fname = 'scantron_orig_'.$fname;
-    } else {   
-# Create the directory if not present
+    } else {
         $fname="$subdir/$fname";
     }
-    if ($coursedoc) {
+    if ($context eq 'coursedoc') {
 	my $docuname=$env{'course.'.$env{'request.course.id'}.'.num'};
 	my $docudom=$env{'course.'.$env{'request.course.id'}.'.domain'};
         if ($env{'form.folder'} =~ m/^(default|supplemental)/) {
             return &finishuserfileupload($docuname,$docudom,
 					 $formname,$fname,$parser,$allfiles,
 					 $codebase,$thumbwidth,$thumbheight,
-                                         $resizewidth,$resizeheight);
+                                         $resizewidth,$resizeheight,$context,$mimetype);
         } else {
             $fname=$env{'form.folder'}.'/'.$fname;
             return &process_coursefile('uploaddoc',$docuname,$docudom,
 				       $fname,$formname,$parser,
-				       $allfiles,$codebase);
+				       $allfiles,$codebase,$mimetype);
         }
     } elsif (defined($destuname)) {
         my $docuname=$destuname;
@@ -2399,8 +2572,7 @@ sub userfileupload {
 	return &finishuserfileupload($docuname,$docudom,$formname,$fname,
 				     $parser,$allfiles,$codebase,
                                      $thumbwidth,$thumbheight,
-                                     $resizewidth,$resizeheight);
-        
+                                     $resizewidth,$resizeheight,$context,$mimetype);
     } else {
         my $docuname=$env{'user.name'};
         my $docudom=$env{'user.domain'};
@@ -2411,13 +2583,13 @@ sub userfileupload {
 	return &finishuserfileupload($docuname,$docudom,$formname,$fname,
 				     $parser,$allfiles,$codebase,
                                      $thumbwidth,$thumbheight,
-                                     $resizewidth,$resizeheight);
+                                     $resizewidth,$resizeheight,$context,$mimetype);
     }
 }
 
 sub finishuserfileupload {
     my ($docuname,$docudom,$formname,$fname,$parser,$allfiles,$codebase,
-        $thumbwidth,$thumbheight,$resizewidth,$resizeheight) = @_;
+        $thumbwidth,$thumbheight,$resizewidth,$resizeheight,$context,$mimetype) = @_;
     my $path=$docudom.'/'.$docuname.'/';
     my $filepath=$perlvar{'lonDocRoot'};
   
@@ -2443,7 +2615,23 @@ sub finishuserfileupload {
 	    print STDERR ('Failed to create '.$filepath.'/'.$file."\n");
 	    return '/adm/notfound.html';
 	}
-	if (!print FH ($env{'form.'.$formname})) {
+        if ($context eq 'overwrite') {
+            my $source =  LONCAPA::tempdir().'/overwrites/'.$docudom.'/'.$docuname.'/'.$fname;
+            my $target = $filepath.'/'.$file;
+            if (-e $source) {
+                my @info = stat($source);
+                if ($info[9] eq $env{'form.timestamp'}) {   
+                    unless (&File::Copy::move($source,$target)) {
+                        &logthis('Failed to overwrite '.$filepath.'/'.$file);
+                        return "Moving from $source failed";
+                    }
+                } else {
+                    return "Temporary file: $source had unexpected date/time for last modification";
+                }
+            } else {
+                return "Temporary file: $source missing";
+            }
+        } elsif (!print FH ($env{'form.'.$formname})) {
 	    &logthis('Failed to write to '.$filepath.'/'.$file);
 	    print STDERR ('Failed to write to '.$filepath.'/'.$file."\n");
 	    return '/adm/notfound.html';
@@ -2459,8 +2647,8 @@ sub finishuserfileupload {
     }
     if ($parser eq 'parse') {
         my $mm = new File::MMagic;
-        my $mime_type = $mm->checktype_filename($filepath.'/'.$file);
-        if ($mime_type eq 'text/html') {
+        my $type = $mm->checktype_filename($filepath.'/'.$file);
+        if ($type eq 'text/html') {
             my $parse_result = &extract_embedded_items($filepath.'/'.$file,
                                                        $allfiles,$codebase);
             unless ($parse_result eq 'ok') {
@@ -2468,6 +2656,9 @@ sub finishuserfileupload {
 	   	         ' for embedded media: '.$parse_result); 
             }
         }
+        if (ref($mimetype)) {
+            $$mimetype = $type;
+        }
     }
     if (($thumbwidth =~ /^\d+$/) && ($thumbheight =~ /^\d+$/)) {
         my $input = $filepath.'/'.$file;
@@ -3001,8 +3192,9 @@ sub get_my_roles {
     unless (defined($uname)) { $uname=$env{'user.name'}; }
     unless (defined($udom)) { $udom=$env{'user.domain'}; }
     my (%dumphash,%nothide);
-    if ($context eq 'userroles') { 
-        %dumphash = &dump('roles',$udom,$uname);
+    if ($context eq 'userroles') {
+        my $extra = &freeze_escape({'skipcheck' => 1});
+        %dumphash = &dump('roles',$udom,$uname,'.',undef,$extra);
     } else {
         %dumphash=
             &dump('nohist_userroles',$udom,$uname);
@@ -3062,6 +3254,10 @@ sub get_my_roles {
                     if (!grep(/^cr$/,@{$roles})) {
                         next;
                     }
+                } elsif ($role =~ /^gr\//) {
+                    if (!grep(/^gr$/,@{$roles})) {
+                        next;
+                    }
                 } else {
                     next;
                 }
@@ -3622,7 +3818,7 @@ sub tmpreset {
   if ($domain eq 'public' && $stuname eq 'public') {
       $stuname=$ENV{'REMOTE_ADDR'};
   }
-  my $path=$perlvar{'lonDaemons'}.'/tmp';
+  my $path=LONCAPA::tempdir();
   my %hash;
   if (tie(%hash,'GDBM_File',
 	  $path.'/tmpstore_'.$stuname.'_'.$domain.'_'.$namespace.'.db',
@@ -3661,7 +3857,7 @@ sub tmpstore {
   }
   my $now=time;
   my %hash;
-  my $path=$perlvar{'lonDaemons'}.'/tmp';
+  my $path=LONCAPA::tempdir();
   if (tie(%hash,'GDBM_File',
 	  $path.'/tmpstore_'.$stuname.'_'.$domain.'_'.$namespace.'.db',
 	  &GDBM_WRCREAT(),0640)) {
@@ -3707,7 +3903,7 @@ sub tmprestore {
   $namespace=~s/\//\_/g;
   $namespace=~s/\W//g;
   my %hash;
-  my $path=$perlvar{'lonDaemons'}.'/tmp';
+  my $path=LONCAPA::tempdir();
   if (tie(%hash,'GDBM_File',
 	  $path.'/tmpstore_'.$stuname.'_'.$domain.'_'.$namespace.'.db',
 	  &GDBM_READER(),0640)) {
@@ -3844,6 +4040,8 @@ sub restore {
 }
 
 # ---------------------------------------------------------- Course Description
+#
+#  
 
 sub coursedescription {
     my ($courseid,$args)=@_;
@@ -3873,7 +4071,8 @@ sub coursedescription {
 	return %returnhash;
     }
 
-    # get the data agin
+    # get the data again
+
     if (!$args->{'one_time'}) {
 	$envhash{'course.'.$normalid.'.last_cache'}=time;
     }
@@ -3881,6 +4080,10 @@ sub coursedescription {
     if ($chome ne 'no_host') {
        %returnhash=&dump('environment',$cdomain,$cnum);
        if (!exists($returnhash{'con_lost'})) {
+	   my $username = $env{'user.name'}; # Defult username
+	   if(defined $args->{'user'}) {
+	       $username = $args->{'user'};
+	   }
            $returnhash{'home'}= $chome;
 	   $returnhash{'domain'} = $cdomain;
 	   $returnhash{'num'} = $cnum;
@@ -3891,8 +4094,8 @@ sub coursedescription {
                $envhash{'course.'.$normalid.'.'.$name}=$value;
            }
            $returnhash{'url'}=&clutter($returnhash{'url'});
-           $returnhash{'fn'}=$perlvar{'lonDaemons'}.'/tmp/'.
-	       $env{'user.name'}.'_'.$cdomain.'_'.$cnum;
+           $returnhash{'fn'}=LONCAPA::tempdir() .
+	       $username.'_'.$cdomain.'_'.$cnum;
            $envhash{'course.'.$normalid.'.home'}=$chome;
            $envhash{'course.'.$normalid.'.domain'}=$cdomain;
            $envhash{'course.'.$normalid.'.num'}=$cnum;
@@ -3981,7 +4184,7 @@ sub rolesinit {
     my ($domain,$username,$authhost)=@_;
     my $now=time;
     my %userroles = ('user.login.time' => $now);
-    my $extra = &freeze_escape({'clientcheckrole' => 1});
+    my $extra = &freeze_escape({'skipcheck' => 1});
     my $rolesdump=reply("dump:$domain:$username:roles:.::$extra",$authhost);
     if (($rolesdump eq 'con_lost') || ($rolesdump eq '') || 
         ($rolesdump =~ /^error:/)) {
@@ -3989,7 +4192,6 @@ sub rolesinit {
     }
     my %allroles=();
     my %allgroups=();   
-    my $group_privs;
 
     if ($rolesdump ne '') {
         foreach my $entry (split(/&/,$rolesdump)) {
@@ -4006,6 +4208,7 @@ sub rolesinit {
 		}
             } elsif ($role =~ m|^gr/|) {
                 ($trole,$tend,$tstart) = split(/_/,$role);
+                next if ($tstart eq '-1');
                 ($trole,$group_privs) = split(/\//,$trole);
                 $group_privs = &unescape($group_privs);
 	    } else {
@@ -4158,7 +4361,7 @@ sub set_userprivs {
             }
         }
         my $thesestr='';
-        foreach my $priv (keys(%thesepriv)) {
+        foreach my $priv (sort(keys(%thesepriv))) {
 	    $thesestr.=':'.$priv.'&'.$thesepriv{$priv};
 	}
         $userroles->{'user.priv.'.$role} = $thesestr;
@@ -4167,7 +4370,7 @@ sub set_userprivs {
 }
 
 sub role_status {
-    my ($rolekey,$then,$refresh,$now,$role,$where,$trolecode,$tstatus,$tstart,$tend) = @_;
+    my ($rolekey,$update,$refresh,$now,$role,$where,$trolecode,$tstatus,$tstart,$tend) = @_;
     my @pwhere = ();
     if (exists($env{$rolekey}) && $env{$rolekey} ne '') {
         (undef,undef,$$role,@pwhere)=split(/\./,$rolekey);
@@ -4176,7 +4379,7 @@ sub role_status {
             $$trolecode=$$role.'.'.$$where;
             ($$tstart,$$tend)=split(/\./,$env{$rolekey});
             $$tstatus='is';
-            if ($$tstart && $$tstart>$then) {
+            if ($$tstart && $$tstart>$update) {
                 $$tstatus='future';
                 if ($$tstart<$now) {
                     if ($$tstart && $$tstart>$refresh) {
@@ -4201,32 +4404,9 @@ sub role_status {
                                 $group_privs = &unescape($group_privs);
                                 &group_roleprivs(\%allgroups,$$where,$group_privs,$$tend,$$tstart);
                                 my %course_roles = &get_my_roles($env{'user.name'},$env{'user.domain'},'userroles',['active'],['cc','co','in','ta','ep','ad','st','cr'],[$tdomain],1);
-                                if (keys(%course_roles) > 0) {
-                                    my ($tnum) = ($trest =~ /^($match_courseid)/);
-                                    if ($tdomain ne '' && $tnum ne '') { 
-                                        foreach my $key (keys(%course_roles)) {
-                                            if ($key =~ /^\Q$tnum\E:\Q$tdomain\E:([^:]+):?([^:]*)/) {
-                                                my $crsrole = $1;
-                                                my $crssec = $2;
-                                                if ($crsrole =~ /^cr/) {
-                                                    unless (grep(/^cr$/,@rolecodes)) {
-                                                        push(@rolecodes,'cr');
-                                                    }
-                                                } else {
-                                                    unless(grep(/^\Q$crsrole\E$/,@rolecodes)) {
-                                                        push(@rolecodes,$crsrole);
-                                                    }
-                                                }
-                                                my $rolekey = $crsrole.'./'.$tdomain.'/'.$tnum;
-                                                if ($crssec ne '') {
-                                                    $rolekey .= '/'.$crssec;
-                                                }
-                                                $rolekey .= './';
-                                                $groups_roles{$rolekey} = \@rolecodes;
-                                            }
-                                        }
-                                    }
-                                }
+                                &get_groups_roles($tdomain,$trest,
+                                                  \%course_roles,\@rolecodes,
+                                                  \%groups_roles);
                             } else {
                                 push(@rolecodes,$$role);
                                 &standard_roleprivs(\%allroles,$$role,$tdomain,$spec,$trest,$$where);
@@ -4240,7 +4420,7 @@ sub role_status {
                 }
             }
             if ($$tend) {
-                if ($$tend<$then) {
+                if ($$tend<$update) {
                     $$tstatus='expired';
                 } elsif ($$tend<$now) {
                     $$tstatus='will_not';
@@ -4250,23 +4430,81 @@ sub role_status {
     }
 }
 
+sub get_groups_roles {
+    my ($cdom,$rest,$cdom_courseroles,$rolecodes,$groups_roles) = @_;
+    return unless((ref($cdom_courseroles) eq 'HASH') && 
+                  (ref($rolecodes) eq 'ARRAY') && 
+                  (ref($groups_roles) eq 'HASH')); 
+    if (keys(%{$cdom_courseroles}) > 0) {
+        my ($cnum) = ($rest =~ /^($match_courseid)/);
+        if ($cdom ne '' && $cnum ne '') {
+            foreach my $key (keys(%{$cdom_courseroles})) {
+                if ($key =~ /^\Q$cnum\E:\Q$cdom\E:([^:]+):?([^:]*)/) {
+                    my $crsrole = $1;
+                    my $crssec = $2;
+                    if ($crsrole =~ /^cr/) {
+                        unless (grep(/^cr$/,@{$rolecodes})) {
+                            push(@{$rolecodes},'cr');
+                        }
+                    } else {
+                        unless(grep(/^\Q$crsrole\E$/,@{$rolecodes})) {
+                            push(@{$rolecodes},$crsrole);
+                        }
+                    }
+                    my $rolekey = "$crsrole./$cdom/$cnum";
+                    if ($crssec ne '') {
+                        $rolekey .= "/$crssec";
+                    }
+                    $rolekey .= './';
+                    $groups_roles->{$rolekey} = $rolecodes;
+                }
+            }
+        }
+    }
+    return;
+}
+
+sub delete_env_groupprivs {
+    my ($where,$courseroles,$possroles) = @_;
+    return unless((ref($courseroles) eq 'HASH') && (ref($possroles) eq 'ARRAY'));
+    my ($dummy,$udom,$uname,$group) = split(/\//,$where);
+    unless (ref($courseroles->{$udom}) eq 'HASH') {
+        %{$courseroles->{$udom}} =
+            &get_my_roles('','','userroles',['active'],
+                          $possroles,[$udom],1);
+    }
+    if (ref($courseroles->{$udom}) eq 'HASH') {
+        foreach my $item (keys(%{$courseroles->{$udom}})) {
+            my ($cnum,$cdom,$crsrole,$crssec) = split(/:/,$item);
+            my $area = '/'.$cdom.'/'.$cnum;
+            my $privkey = "user.priv.$crsrole.$area";
+            if ($crssec ne '') {
+                $privkey .= '/'.$crssec;
+            }
+            $privkey .= ".$area/$group";
+            &Apache::lonnet::delenv($privkey,undef,[$crsrole]);
+        }
+    }
+    return;
+}
+
 sub check_adhoc_privs {
-    my ($cdom,$cnum,$then,$refresh,$now,$checkrole) = @_;
+    my ($cdom,$cnum,$update,$refresh,$now,$checkrole,$caller) = @_;
     my $cckey = 'user.role.'.$checkrole.'./'.$cdom.'/'.$cnum;
     if ($env{$cckey}) {
         my ($role,$where,$trolecode,$tstart,$tend,$tremark,$tstatus,$tpstart,$tpend);
-        &role_status($cckey,$then,$refresh,$now,\$role,\$where,\$trolecode,\$tstatus,\$tstart,\$tend);
+        &role_status($cckey,$update,$refresh,$now,\$role,\$where,\$trolecode,\$tstatus,\$tstart,\$tend);
         unless (($tstatus eq 'is') || ($tstatus eq 'will_not')) {
-            &set_adhoc_privileges($cdom,$cnum,$checkrole);
+            &set_adhoc_privileges($cdom,$cnum,$checkrole,$caller);
         }
     } else {
-        &set_adhoc_privileges($cdom,$cnum,$checkrole);
+        &set_adhoc_privileges($cdom,$cnum,$checkrole,$caller);
     }
 }
 
 sub set_adhoc_privileges {
 # role can be cc or ca
-    my ($dcdom,$pickedcourse,$role) = @_;
+    my ($dcdom,$pickedcourse,$role,$caller) = @_;
     my $area = '/'.$dcdom.'/'.$pickedcourse;
     my $spec = $role.'.'.$area;
     my %userroles = &set_arearole($role,$area,'','',$env{'user.domain'},
@@ -4276,14 +4514,16 @@ sub set_adhoc_privileges {
     my ($author,$adv)= &set_userprivs(\%userroles,\%ccrole);
     &appenv(\%userroles,[$role,'cm']);
     &log($env{'user.domain'},$env{'user.name'},$env{'user.home'},"Role ".$role);
-    &appenv( {'request.role'        => $spec,
-              'request.role.domain' => $dcdom,
-              'request.course.sec'  => ''
-             }
-           );
-    my $tadv=0;
-    if (&allowed('adv') eq 'F') { $tadv=1; }
-    &appenv({'request.role.adv'    => $tadv});
+    unless ($caller eq 'constructaccess' && $env{'request.course.id'}) {
+        &appenv( {'request.role'        => $spec,
+                  'request.role.domain' => $dcdom,
+                  'request.course.sec'  => ''
+                 }
+               );
+        my $tadv=0;
+        if (&allowed('adv') eq 'F') { $tadv=1; }
+        &appenv({'request.role.adv'    => $tadv});
+    }
 }
 
 # --------------------------------------------------------------- get interface
@@ -4332,7 +4572,7 @@ sub del {
 # -------------------------------------------------------------- dump interface
 
 sub dump {
-    my ($namespace,$udomain,$uname,$regexp,$range)=@_;
+    my ($namespace,$udomain,$uname,$regexp,$range,$extra)=@_;
     if (!$udomain) { $udomain=$env{'user.domain'}; }
     if (!$uname) { $uname=$env{'user.name'}; }
     my $uhome=&homeserver($uname,$udomain);
@@ -4341,18 +4581,21 @@ sub dump {
     } else {
 	$regexp='.';
     }
-    my $rep=&reply("dump:$udomain:$uname:$namespace:$regexp:$range",$uhome);
+    my $rep=&reply("dump:$udomain:$uname:$namespace:$regexp:$range:$extra",$uhome);
     my @pairs=split(/\&/,$rep);
     my %returnhash=();
-    foreach my $item (@pairs) {
-	my ($key,$value)=split(/=/,$item,2);
-	$key = &unescape($key);
-	next if ($key =~ /^error: 2 /);
-	$returnhash{$key}=&thaw_unescape($value);
+    if (!($rep =~ /^error/ )) {
+	foreach my $item (@pairs) {
+	    my ($key,$value)=split(/=/,$item,2);
+	    $key = &unescape($key);
+	    next if ($key =~ /^error: 2 /);
+	    $returnhash{$key}=&thaw_unescape($value);
+	}
     }
     return %returnhash;
 }
 
+
 # --------------------------------------------------------- dumpstore interface
 
 sub dumpstore {
@@ -4635,7 +4878,7 @@ sub tmpget {
     return %returnhash;
 }
 
-# ------------------------------------------------------------ tmpget interface
+# ------------------------------------------------------------ tmpdel interface
 sub tmpdel {
     my ($token,$server)=@_;
     if (!defined($server)) { $server = $perlvar{'lonHostID'}; }
@@ -4886,7 +5129,7 @@ sub is_portfolio_file {
 }
 
 sub usertools_access {
-    my ($uname,$udom,$tool,$action,$context) = @_;
+    my ($uname,$udom,$tool,$action,$context,$userenvref,$domdefref,$is_advref)=@_;
     my ($access,%tools);
     if ($context eq '') {
         $context = 'tools';
@@ -4928,9 +5171,14 @@ sub usertools_access {
         $toolstatus = $env{'environment.'.$context.'.'.$tool};
         $inststatus = $env{'environment.inststatus'};
     } else {
-        my %userenv = &userenvironment($udom,$uname,$context.'.'.$tool,'inststatus');
-        $toolstatus = $userenv{$context.'.'.$tool};
-        $inststatus = $userenv{'inststatus'};
+        if (ref($userenvref) eq 'HASH') {
+            $toolstatus = $userenvref->{$context.'.'.$tool};
+            $inststatus = $userenvref->{'inststatus'};
+        } else {
+            my %userenv = &userenvironment($udom,$uname,$context.'.'.$tool,'inststatus');
+            $toolstatus = $userenv{$context.'.'.$tool};
+            $inststatus = $userenv{'inststatus'};
+        }
     }
 
     if ($toolstatus ne '') {
@@ -4942,8 +5190,17 @@ sub usertools_access {
         return $access;
     }
 
-    my $is_adv = &is_advanced_user($udom,$uname);
-    my %domdef = &get_domain_defaults($udom);
+    my ($is_adv,%domdef);
+    if (ref($is_advref) eq 'HASH') {
+        $is_adv = $is_advref->{'is_adv'};
+    } else {
+        $is_adv = &is_advanced_user($udom,$uname);
+    }
+    if (ref($domdefref) eq 'HASH') {
+        %domdef = %{$domdefref};
+    } else {
+        %domdef = &get_domain_defaults($udom);
+    }
     if (ref($domdef{$tool}) eq 'HASH') {
         if ($is_adv) {
             if ($domdef{$tool}{'_LC_adv'} ne '') {
@@ -5017,6 +5274,11 @@ sub is_course_owner {
 
 sub is_advanced_user {
     my ($udom,$uname) = @_;
+    if ($udom ne '' && $uname ne '') {
+        if (($udom eq $env{'user.domain'}) && ($uname eq $env{'user.name'})) {
+            return $env{'user.adv'};  
+        }
+    }
     my %roleshash = &get_my_roles($uname,$udom,'userroles',undef,undef,undef,1);
     my %allroles;
     my $is_adv;
@@ -5532,7 +5794,7 @@ sub allowed {
        my $unamedom=$env{'user.name'}.':'.$env{'user.domain'};
        if ($env{'course.'.$env{'request.course.id'}.'.'.$priv.'.roles.denied'}
 	   =~/\Q$rolecode\E/) {
-	   if ($priv ne 'pch') { 
+	   if (($priv ne 'pch') && ($priv ne 'plc')) { 
 	       &logthis($env{'user.domain'}.':'.$env{'user.name'}.':'.$env{'user.home'}.':'.
 			'Denied by role: '.$priv.' for '.$uri.' as '.$rolecode.' in '.
 			$env{'request.course.id'});
@@ -5542,7 +5804,7 @@ sub allowed {
 
        if ($env{'course.'.$env{'request.course.id'}.'.'.$priv.'.users.denied'}
 	   =~/\Q$unamedom\E/) {
-	   if ($priv ne 'pch') { 
+	   if (($priv ne 'pch') && ($priv ne 'plc')) { 
 	       &logthis($env{'user.domain'}.':'.$env{'user.name'}.':'.$env{'user.home'}.
 			'Denied by user: '.$priv.' for '.$uri.' as '.$unamedom.' in '.
 			$env{'request.course.id'});
@@ -5556,7 +5818,7 @@ sub allowed {
    if ($thisallowed=~/R/) {
        my $rolecode=(split(/\./,$env{'request.role'}))[0];
        if (&metadata($uri,'roledeny')=~/\Q$rolecode\E/) {
-	   if ($priv ne 'pch') { 
+	   if (($priv ne 'pch') && ($priv ne 'plc')) { 
 	       &logthis($env{'user.domain'}.':'.$env{'user.name'}.':'.$env{'user.home'}.':'.
 			'Denied by role: '.$priv.' for '.$uri.' as '.$rolecode);
 	   }
@@ -5783,7 +6045,7 @@ sub fetch_enrollment_query {
                 $$replyref{$key} = $value;
             }
         } else {
-            my $pathname = $perlvar{'lonDaemons'}.'/tmp';
+            my $pathname = LONCAPA::tempdir();
             foreach my $line (@responses) {
                 my ($key,$value) = split(/=/,$line);
                 $$replyref{$key} = $value;
@@ -5813,7 +6075,7 @@ sub fetch_enrollment_query {
 
 sub get_query_reply {
     my $queryid=shift;
-    my $replyfile=$perlvar{'lonDaemons'}.'/tmp/'.$queryid;
+    my $replyfile=LONCAPA::tempdir().$queryid;
     my $reply='';
     for (1..100) {
 	sleep 2;
@@ -5909,9 +6171,9 @@ sub auto_get_sections {
 }
 
 sub auto_new_course {
-    my ($cnum,$cdom,$inst_course_id,$owner) = @_;
+    my ($cnum,$cdom,$inst_course_id,$owner,$coowners) = @_;
     my $homeserver = &homeserver($cnum,$cdom);
-    my $response=&unescape(&reply('autonewcourse:'.$inst_course_id.':'.$owner.':'.$cdom,$homeserver));
+    my $response=&unescape(&reply('autonewcourse:'.$inst_course_id.':'.&escape($owner).':'.$cdom.':'.&escape($coowners),$homeserver));
     return $response;
 }
 
@@ -6302,7 +6564,8 @@ sub get_users_groups {
     } else {  
         $grouplist = '';
         my $courseurl = &courseid_to_courseurl($courseid);
-        my %roleshash = &dump('roles',$udom,$uname,$courseurl);
+        my $extra = &freeze_escape({'skipcheck' => 1});
+        my %roleshash = &dump('roles',$udom,$uname,$courseurl,undef,$extra);
         my $access_end = $env{'course.'.$courseid.
                               '.default_enrollment_end_date'};
         my $now = time;
@@ -6805,6 +7068,9 @@ sub modifyuser {
     if ($reply ne 'ok') { 
         return 'error: '.$reply;
     }
+    if ($names{'permanentemail'} ne $oldnames{'permanentemail'}) {
+        &Apache::lonnet::devalidate_cache_new('emailscache',$uname.':'.$udom);
+    }
     my $sqlresult = &update_allusers_table($uname,$udom,\%names);
     &devalidate_cache_new('namescache',$uname.':'.$udom);
     $logmsg = 'Success modifying user '.$logmsg;
@@ -7124,8 +7390,8 @@ sub store_userdata {
                     $namevalue.=&escape($key).'='.&freeze_escape($$storehash{$key}).'&';
                 }
                 $namevalue=~s/\&$//;
-                $result =  &reply("store:$env{'user.domain'}:$env{'user.name'}:".
-                                  "$namespace:$datakey:$namevalue",$uhome);
+                $result =  &reply("store:$udom:$uname:$namespace:$datakey:".
+                                  $namevalue,$uhome);
             }
         } else {
             $result = 'error: data to store was not a hash reference'; 
@@ -7178,10 +7444,10 @@ sub diskusage {
 }
 
 sub is_locked {
-    my ($file_name, $domain, $user) = @_;
+    my ($file_name, $domain, $user, $which) = @_;
     my @check;
     my $is_locked;
-    push @check, $file_name;
+    push (@check,$file_name);
     my %locked = &get('file_permissions',\@check,
 		      $env{'user.domain'},$env{'user.name'});
     my ($tmp)=keys(%locked);
@@ -7190,14 +7456,19 @@ sub is_locked {
     if (ref($locked{$file_name}) eq 'ARRAY') {
         $is_locked = 'false';
         foreach my $entry (@{$locked{$file_name}}) {
-           if (ref($entry) eq 'ARRAY') { 
+           if (ref($entry) eq 'ARRAY') {
                $is_locked = 'true';
-               last;
+               if (ref($which) eq 'ARRAY') {
+                   push(@{$which},$entry);
+               } else {
+                   last;
+               }
            }
        }
     } else {
         $is_locked = 'false';
     }
+    return $is_locked;
 }
 
 sub declutter_portfile {
@@ -7241,7 +7512,7 @@ sub save_selected_files {
 sub clear_selected_files {
     my ($user) = @_;
     my $filename = $user."savedfiles";
-    open (OUT, '>'.$Apache::lonnet::perlvar{'lonDaemons'}.'/tmp/'.$filename);
+    open (OUT, '>'.LONCAPA::tempdir().$filename);
     print (OUT undef);
     close (OUT);
     return ("ok");    
@@ -7251,7 +7522,7 @@ sub files_in_path {
     my ($user, $path) = @_;
     my $filename = $user."savedfiles";
     my %return_files;
-    open (IN, '<'.$Apache::lonnet::perlvar{'lonDaemons'}.'/tmp/'.$filename);
+    open (IN, '<'.LONCAPA::tempdir().$filename);
     while (my $line_in = <IN>) {
         chomp ($line_in);
         my @paths_and_file = split (m!/!, $line_in);
@@ -7273,7 +7544,7 @@ sub files_not_in_path {
     my $filename = $user."savedfiles";
     my @return_files;
     my $path_part;
-    open(IN, '<'.$Apache::lonnet::perlvar{'lonDaemons'}.'/tmp/'.$filename);
+    open(IN, '<'.LONCAPA::.$filename);
     while (my $line = <IN>) {
         #ok, I know it's clunky, but I want it to work
         my @paths_and_file = split(m|/|, $line);
@@ -8348,7 +8619,7 @@ sub metadata {
     if (($uri eq '') || 
 	(($uri =~ m|^/*adm/|) && 
 	     ($uri !~ m|^adm/includes|) && ($uri !~ m|/bulletinboard$|)) ||
-        ($uri =~ m|/$|) || ($uri =~ m|/.meta$|) ) {
+        ($uri =~ m|/$|) || ($uri =~ m|/.meta$|) || ($uri =~ m{^/*uploaded/.+\.sequence$})) {
 	return undef;
     }
     if (($uri =~ /^~/ || $uri =~ m{home/$match_username/public_html/}) 
@@ -8394,7 +8665,8 @@ sub metadata {
 		&Apache::lonnet::ssi_body($which,
 					  ('grade_target' => 'meta'));
 	    $cachetime = 1; # only want this cached in the child not long term
-	} elsif ($uri !~ m -^(editupload)/-) {
+	} elsif (($uri !~ m -^(editupload)/-) && 
+                 ($uri !~ m{^/*uploaded/$match_domain/$match_courseid/docs/})) {
 	    my $file=&filelocation('',&clutter($filename));
 	    #push(@{$metaentry{$uri.'.file'}},$file);
 	    $metastring=&getfile($file);
@@ -8793,8 +9065,9 @@ sub symbverify {
             $thisurl =~ s/\?.+$//;
         }
         my $ids=$bighash{'ids_'.&clutter($thisurl)};
-        unless ($ids) { 
-           $ids=$bighash{'ids_/'.$thisurl};
+        unless ($ids) {
+            my $idkey = 'ids_'.($thisurl =~ m{^/}? '' : '/').$thisurl;  
+            $ids=$bighash{$idkey};
         }
         if ($ids) {
 # ------------------------------------------------------------------- Has ID(s)
@@ -8807,7 +9080,8 @@ sub symbverify {
   &symbclean(&declutter($bighash{'map_id_'.$mapid}).'___'.$resid.'___'.$thisfn)
    eq $symb) { 
 		   if (($env{'request.role.adv'}) ||
-		       $bighash{'encrypted_'.$id} eq $env{'request.enc'}) {
+		       ($bighash{'encrypted_'.$id} eq $env{'request.enc'}) ||
+                       ($thisurl eq '/adm/navmaps')) {
 		       $okay=1; 
 		   }
 	       }
@@ -9564,7 +9838,7 @@ sub filelocation {
         my @ids=&current_machine_ids();
         foreach my $id (@ids) { if ($id eq $home) { $is_me=1; } }
         if ($is_me) {
-  	    $location=&propath($udom,$uname).'/userfiles/'.$filename;
+  	    $location=propath($udom,$uname).'/userfiles/'.$filename;
         } else {
   	  $location=$Apache::lonnet::perlvar{'lonDocRoot'}.'/userfiles/'.
   	      $udom.'/'.$uname.'/'.$filename;
@@ -9886,13 +10160,19 @@ sub get_dns {
     my $loaded;
     my %name_to_host;
     my %internetdom;
+    my %LC_dns_serv;
 
     sub parse_hosts_tab {
 	my ($file) = @_;
 	foreach my $configline (@$file) {
 	    next if ($configline =~ /^(\#|\s*$ )/x);
-	    next if ($configline =~ /^\^/);
-	    chomp($configline);
+            chomp($configline);
+	    if ($configline =~ /^\^/) {
+                if ($configline =~ /^\^([\w.\-]+)/) {
+                    $LC_dns_serv{$1} = 1;
+                }
+                next;
+            }
 	    my ($id,$domain,$role,$name,$protocol,$intdom)=split(/:/,$configline);
 	    $name=~s/\s//g;
 	    if ($id && $domain && $role && $name) {
@@ -10028,6 +10308,14 @@ sub get_dns {
         my ($lonid) = @_;
         return $internetdom{$lonid};
     }
+
+    sub is_LC_dns {
+        &load_hosts_tab() if (!$loaded);
+
+        my ($hostname) = @_;
+        return exists($LC_dns_serv{$hostname});
+    }
+
 }
 
 { 
@@ -10305,7 +10593,7 @@ BEGIN {
 
 # ------------- set up temporary directory
 {
-    $tmpdir = $perlvar{'lonDaemons'}.'/tmp/';
+    $tmpdir = LONCAPA::tempdir();
 
 }
 
@@ -10799,11 +11087,32 @@ revokecustomrole($udom,$uname,$url,$role
 
 =item *
 
-coursedescription($courseid) : returns a hash of information about the
+coursedescription($courseid,$options) : returns a hash of information about the
 specified course id, including all environment settings for the
 course, the description of the course will be in the hash under the
 key 'description'
 
+$options is an optional parameter that if supplied is a hash reference that controls
+what how this function works.  It has the following key/values:
+
+=over 4
+
+=item freshen_cache
+
+If defined, and the environment cache for the course is valid, it is 
+returned in the returned hash.
+
+=item one_time
+
+If defined, the last cache time is set to _now_
+
+=item user
+
+If defined, the supplied username is used instead of the current user.
+
+
+=back
+
 =item *
 
 resdata($name,$domain,$type,@which) : request for current parameter
@@ -11196,11 +11505,12 @@ splitting on '&', supports elements that
 
 =head2 Logging Routines
 
-=over 4
 
 These routines allow one to make log messages in the lonnet.log and
 lonnet.perm logfiles.
 
+=over 4
+
 =item *
 
 logtouch() : make sure the logfile, lonnet.log, exists
@@ -11216,6 +11526,7 @@ logperm() : append a permanent message t
 file never gets deleted by any automated portion of the system, only
 messages of critical importance should go in here.
 
+
 =back
 
 =head2 General File Helper Routines
@@ -11289,8 +11600,10 @@ userfileupload(): main rotine for puttin
            filename, and the contents of the file to create/modifed exist
            the filename is in $env{'form.'.$formname.'.filename'} and the
            contents of the file is located in $env{'form.'.$formname}
- coursedoc - if true, store the file in the course of the active role
-             of the current user
+ context - if coursedoc, store the file in the course of the active role
+             of the current user; 
+           if 'existingfile': store in 'overwrites' in /home/httpd/perl/tmp
+           if 'canceloverwrite': delete file in tmp/overwrites directory
  subdir - required - subdirectory to put the file in under ../userfiles/
          if undefined, it will be placed in "unknown"
 
@@ -11312,16 +11625,29 @@ returns: the new clean filename
 
 =item *
 
-finishuserfileupload(): routine that creaes and sends the file to
+finishuserfileupload(): routine that creates and sends the file to
 userspace, probably shouldn't be called directly
 
   docuname: username or courseid of destination for the file
   docudom: domain of user/course of destination for the file
   formname: same as for userfileupload()
-  fname: filename (inculding subdirectories) for the file
+  fname: filename (including subdirectories) for the file
+  parser: if 'parse', will parse (html) file to extract references to objects, links etc.
+  allfiles: reference to hash used to store objects found by parser
+  codebase: reference to hash used for codebases of java objects found by parser
+  thumbwidth: width (pixels) of thumbnail to be created for uploaded image
+  thumbheight: height (pixels) of thumbnail to be created for uploaded image
+  resizewidth: width to be used to resize image using resizeImage from ImageMagick
+  resizeheight: height to be used to resize image using resizeImage from ImageMagick
+  context: if 'overwrite', will move the uploaded file from its temporary location to
+            userfiles to facilitate overwriting a previously uploaded file with same name.
+  mimetype: reference to scalar to accommodate mime type determined
+            from File::MMagic if $parser = parse.
 
  returns either the url of the uploaded file (/uploaded/....) if successful
- and /adm/notfound.html if unsuccessful
+ and /adm/notfound.html if unsuccessful (or an error message if context 
+ was 'overwrite').
+ 
 
 =item *