--- loncom/xml/lonxml.pm	2005/09/14 19:20:23	1.382
+++ loncom/xml/lonxml.pm	2006/03/10 23:49:35	1.401
@@ -1,7 +1,7 @@
 # The LearningOnline Network with CAPA
 # XML Parser Module 
 #
-# $Id: lonxml.pm,v 1.382 2005/09/14 19:20:23 albertel Exp $
+# $Id: lonxml.pm,v 1.401 2006/03/10 23:49:35 albertel Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -52,6 +52,7 @@ use Math::Random();
 use Opcode();
 use POSIX qw(strftime);
 use Time::HiRes qw( gettimeofday tv_interval );
+use Symbol();
 
 sub register {
   my ($space,@taglist) = @_;
@@ -148,6 +149,19 @@ $Apache::lonxml::post_evaluate=1;
 #a header message to emit in the case of any generated warning or errors
 $Apache::lonxml::warnings_error_header='';
 
+#  Control whether or not LaTeX symbols should be substituted for their
+#  \ style equivalents...this may be turned off e.g. in an verbatim
+#  environment.
+
+$Apache::lonxml::substitute_LaTeX_symbols = 1; # Starts out on.
+
+sub enable_LaTeX_substitutions {
+    $Apache::lonxml::substitute_LaTeX_symbols = 1;
+}
+sub disable_LaTeX_substitutions {
+    $Apache::lonxml::substitute_LaTeX_symbols = 0;
+}
+
 sub xmlbegin {
     my ($style)=@_;
     my $output='';
@@ -272,13 +286,7 @@ sub printtokenheader {
         $tcrsid=$courseid;
     }
 
-    my %reply=&Apache::lonnet::get('environment',
-              ['firstname','middlename','lastname','generation'],
-              $tudom,$tuname);
-    my $plainname=$reply{'firstname'}.' '. 
-                  $reply{'middlename'}.' '.
-                  $reply{'lastname'}.' '.
-		  $reply{'generation'};
+    my $plainname=&Apache::loncommon::plainname($tuname,$tudom);
 
     if ($target eq 'web') {
         my %idhash=&Apache::lonnet::idrget($tudom,($tuname));
@@ -369,13 +377,16 @@ sub xmlparse {
  &initdepth();
  &init_alarm();
  my $finaloutput = &inner_xmlparse($target,\@stack,\@parstack,\@pars,
-				   $safeeval,\%style_for_target);
+				   $safeeval,\%style_for_target,1);
 
  if ($env{'request.uri'}) {
     &writeallows($env{'request.uri'});
  }
  &do_registered_ssi();
  if ($Apache::lonxml::counter_changed) { &store_counter() }
+
+ &clean_safespace($safeeval);
+
  if ($env{'form.return_only_error_and_warning_counts'}) {
      return "$errorcount:$warningcount";
  }
@@ -384,6 +395,13 @@ sub xmlparse {
 
 sub latex_special_symbols {
     my ($string,$where)=@_;
+    #
+    #  If e.g. in verbatim mode, then don't substitute.
+    #  but return original string.
+    #
+    if (!($Apache::lonxml::substitute_LaTeX_symbols)) {
+	return $string;
+    }
     if ($where eq 'header') {
 	$string =~ s/(\\|_|\^)/ /g;
 	$string =~ s/(\$|%|\{|\})/\\$1/g;
@@ -413,11 +431,12 @@ sub latex_special_symbols {
 }
 
 sub inner_xmlparse {
-  my ($target,$stack,$parstack,$pars,$safeeval,$style_for_target)=@_;
+  my ($target,$stack,$parstack,$pars,$safeeval,$style_for_target,$start)=@_;
   my $finaloutput = '';
   my $result;
   my $token;
   my $dontpop=0;
+  my $startredirection = $Apache::lonxml::redirection;
   while ( $#$pars > -1 ) {
     while ($token = $$pars['-1']->get_token) {
       if (($token->[0] eq 'T') || ($token->[0] eq 'C') ) {
@@ -527,7 +546,12 @@ sub inner_xmlparse {
   #   $finaloutput.=&endredirection;
   # }
 
-
+  if ( $start && $target eq 'grade') { &endredirection(); }
+  if ( $Apache::lonxml::redirection > $startredirection) {
+      while ($Apache::lonxml::redirection > $startredirection) {
+	  $finaloutput .= &endredirection();
+      }
+  }
   if (($ENV{'QUERY_STRING'}) && ($target eq 'web')) {
     $finaloutput=&afterburn($finaloutput);
   }	    
@@ -625,6 +649,7 @@ sub setup_globals {
   @Apache::lonxml::ssi_info=();
   $Apache::lonxml::post_evaluate=1;
   $Apache::lonxml::warnings_error_header='';
+  $Apache::lonxml::substitute_LaTeX_symbols = 1;
   if ($target eq 'meta') {
     $Apache::lonxml::redirection = 0;
     $Apache::lonxml::metamode = 1;
@@ -636,7 +661,7 @@ sub setup_globals {
     $Apache::lonxml::evaluate = 1;
     $Apache::lonxml::import = 1;
   } elsif ($target eq 'grade') {
-    &startredirection;
+    &startredirection(); #ended in inner_xmlparse on exit
     $Apache::lonxml::metamode = 0;
     $Apache::lonxml::evaluate = 1;
     $Apache::lonxml::import = 1;
@@ -665,6 +690,9 @@ sub setup_globals {
 
 sub init_safespace {
   my ($target,$safeeval,$safehole,$safeinit) = @_;
+  $safeeval->deny_only(':dangerous');
+  $safeeval->reval('use Math::Complex;');
+  $safeeval->permit_only(":default");
   $safeeval->permit("entereval");
   $safeeval->permit(":base_math");
   $safeeval->permit("sort");
@@ -722,6 +750,36 @@ sub init_safespace {
   $safehole->wrap(\&Math::Cephes::stdtr ,$safeeval,'&stdtr' );
   $safehole->wrap(\&Math::Cephes::stdtri,$safeeval,'&stdtri');
 
+  $safehole->wrap(\&Math::Cephes::Matrix::mat,$safeeval,'&mat');
+  $safehole->wrap(\&Math::Cephes::Matrix::new,$safeeval,
+		  '&Math::Cephes::Matrix::new');
+  $safehole->wrap(\&Math::Cephes::Matrix::coef,$safeeval,
+		  '&Math::Cephes::Matrix::coef');
+  $safehole->wrap(\&Math::Cephes::Matrix::clr,$safeeval,
+		  '&Math::Cephes::Matrix::clr');
+  $safehole->wrap(\&Math::Cephes::Matrix::add,$safeeval,
+		  '&Math::Cephes::Matrix::add');
+  $safehole->wrap(\&Math::Cephes::Matrix::sub,$safeeval,
+		  '&Math::Cephes::Matrix::sub');
+  $safehole->wrap(\&Math::Cephes::Matrix::mul,$safeeval,
+		  '&Math::Cephes::Matrix::mul');
+  $safehole->wrap(\&Math::Cephes::Matrix::div,$safeeval,
+		  '&Math::Cephes::Matrix::div');
+  $safehole->wrap(\&Math::Cephes::Matrix::inv,$safeeval,
+		  '&Math::Cephes::Matrix::inv');
+  $safehole->wrap(\&Math::Cephes::Matrix::transp,$safeeval,
+		  '&Math::Cephes::Matrix::transp');
+  $safehole->wrap(\&Math::Cephes::Matrix::simq,$safeeval,
+		  '&Math::Cephes::Matrix::simq');
+  $safehole->wrap(\&Math::Cephes::Matrix::mat_to_vec,$safeeval,
+		  '&Math::Cephes::Matrix::mat_to_vec');
+  $safehole->wrap(\&Math::Cephes::Matrix::vec_to_mat,$safeeval,
+		  '&Math::Cephes::Matrix::vec_to_mat');
+  $safehole->wrap(\&Math::Cephes::Matrix::check,$safeeval,
+		  '&Math::Cephes::Matrix::check');
+  $safehole->wrap(\&Math::Cephes::Matrix::check,$safeeval,
+		  '&Math::Cephes::Matrix::check');
+
 #  $safehole->wrap(\&Math::Cephes::new_fract,$safeeval,'&new_fract');
 #  $safehole->wrap(\&Math::Cephes::radd,$safeeval,'&radd');
 #  $safehole->wrap(\&Math::Cephes::rsub,$safeeval,'&rsub');
@@ -762,6 +820,34 @@ sub init_safespace {
   &initialize_rndseed($safeeval);
 }
 
+sub clean_safespace {
+    my ($safeeval) = @_;
+    delete_package_recurse($safeeval->{Root});
+}
+
+sub delete_package_recurse {
+     my ($package) = @_;
+     my @subp;
+     {
+	 no strict 'refs';
+	 while (my ($key,$val) = each(%{*{"$package\::"}})) {
+	     if (!defined($val)) { next; }
+	     local (*ENTRY) = $val;
+	     if (defined *ENTRY{HASH} && $key =~ /::$/ &&
+		 $key ne "main::" && $key ne "<none>::")
+	     {
+		 my ($p) = $package ne "main" ? "$package\::" : "";
+		 ($p .= $key) =~ s/::$//;
+		 push(@subp,$p);
+	     }
+	 }
+     }
+     foreach my $p (@subp) {
+	 delete_package_recurse($p);
+     }
+     Symbol::delete_package($package);
+}
+
 sub initialize_rndseed {
     my ($safeeval)=@_;
     my $rndseed;
@@ -885,6 +971,16 @@ sub decreasedepth {
 #print "<br />e $Apache::lonxml::depth : $Apache::lonxml::olddepth : $token->[1] : $curdepth\n";
 }
 
+sub get_id {
+    my ($parstack,$safeeval)=@_;
+    my $id= &Apache::lonxml::get_param('id',$parstack,$safeeval);
+    if ($env{'request.state'} eq 'construct' && $id =~ /(\.|_)/) {
+	&error(&mt("IDs are not allowed to contain &quot;<tt>_</tt>&quot; or &quot;<tt>.</tt>&quot;"));
+    }
+    if ($id =~ /^\s*$/) { $id = $Apache::lonxml::curdepth; }
+    return $id;
+}
+
 sub get_all_text_unbalanced {
 #there is a copy of this in lonpublisher.pm
     my($tag,$pars)= @_;
@@ -893,7 +989,7 @@ sub get_all_text_unbalanced {
     $tag='<'.$tag.'>';
     while ($token = $$pars[-1]->get_token) {
 	if (($token->[0] eq 'T')||($token->[0] eq 'C')||($token->[0] eq 'D')) {
-	    if ($token->[2]) {
+	    if ($token->[0] eq 'T' && $token->[2]) {
 		$result.='<![CDATA['.$token->[1].']]>';
 	    } else {
 		$result.=$token->[1];
@@ -928,7 +1024,10 @@ sub increment_counter {
 }
 
 sub init_counter {
-    if (defined($env{'form.counter'})) {
+    if ($env{'request.state'} eq 'construct') {
+	$Apache::lonxml::counter=1;
+	$Apache::lonxml::counter_changed=1;
+    } elsif (defined($env{'form.counter'})) {
 	$Apache::lonxml::counter=$env{'form.counter'};
 	$Apache::lonxml::counter_changed=0;
     } else {
@@ -939,9 +1038,36 @@ sub init_counter {
 
 sub store_counter {
     &Apache::lonnet::appenv(('form.counter' => $Apache::lonxml::counter));
+    $Apache::lonxml::counter_changed=0;
     return '';
 }
 
+{
+    my $state;
+    sub clear_problem_counter {
+	undef($state);
+	&Apache::lonnet::delenv('form.counter');
+	&Apache::lonxml::init_counter();
+	&Apache::lonxml::store_counter();
+    }
+
+    sub remember_problem_counter {
+	&Apache::lonnet::transfer_profile_to_env();
+	$state = $env{'form.counter'};
+    }
+
+    sub restore_problem_counter {
+	if (defined($state)) {
+	    &Apache::lonnet::appenv(('form.counter' => $state));
+	}
+    }
+    sub get_problem_counter {
+	if ($Apache::lonxml::counter_changed) { &store_counter() }
+	&Apache::lonnet::transfer_profile_to_env();
+	return $env{'form.counter'};
+    }
+}
+
 sub get_all_text {
     my($tag,$pars,$style)= @_;
     my $gotfullstack=1;
@@ -1076,6 +1202,14 @@ sub parstring {
   return $temp;
 }
 
+sub extlink {
+    my ($res,$exact)=@_;
+    if (!$exact) {
+	$res=&Apache::lonnet::hreflocation($Apache::lonxml::pwd[-1],$res);
+    }
+    push(@Apache::lonxml::extlinks,$res)	 
+}
+
 sub writeallows {
     unless ($#extlinks>=0) { return; }
     my $thisurl = &Apache::lonnet::clutter(shift);
@@ -1352,13 +1486,16 @@ ENDNOTFOUND
 	    }
 #
 # we are in construction space, see if edit mode forced
-            &Apache::loncommon::get_unprocessed_cgi
-                          ($ENV{'QUERY_STRING'},['editmode']);
+            &Apache::loncommon::get_unprocessed_cgi($ENV{'QUERY_STRING'},
+						    ['editmode']);
 	}
 	if (!$env{'form.editmode'} || $env{'form.viewmode'}) {
 	    $result = &Apache::lonxml::xmlparse($request,$target,$filecontents,
 						'',%mystyle);
 	    undef($Apache::lonhomework::parsing_a_task);
+	    &Apache::loncommon::get_unprocessed_cgi($ENV{'QUERY_STRING'},
+						    ['rawmode']);
+	    if ($env{'form.rawmode'}) { $result = $filecontents; }
 	}
     }
     
@@ -1406,7 +1543,12 @@ sub debug {
     if ($Apache::lonxml::debug eq "1") {
 	$|=1;
 	my $request=$Apache::lonxml::request;
-	if (!$request) { $request=Apache->request; }
+	if (!$request) {
+	    eval { $request=Apache->request; };
+	}
+	if (!$request) {
+	    eval { $request=Apache2::RequestUtil->request; };
+	}
 	$request->print('<font size="-2"><pre>DEBUG:'.&HTML::Entities::encode($_[0],'<>&"')."</pre></font>\n");
 	#&Apache::lonnet::logthis($_[0]);
     }