--- doc/loncapafiles/loncapafiles.lpml	2012/03/14 20:21:18	1.791
+++ doc/loncapafiles/loncapafiles.lpml	2013/09/22 01:17:32	1.797.2.46
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.791 2012/03/14 20:21:18 www Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.797.2.46 2013/09/22 01:17:32 raeburn Exp $ -->
 
 <!--
 
@@ -259,7 +259,7 @@ echo '**********************************
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/httpd/conf</targetdir>
   <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/apache2</targetdir>
   <categoryname>standard</categoryname>
   <description>web configuration files</description>
 </directory>
@@ -267,7 +267,7 @@ echo '**********************************
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>etc/httpd/conf/rewrites</targetdir>
   <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd/rewrites</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2/rewrites</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/apache2/rewrites</targetdir>
   <categoryname>standard</categoryname>
   <description>
   default configuration files to enable/disable http:// -> https:// rewrites
@@ -283,56 +283,56 @@ echo '**********************************
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/init.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/init.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/init.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run during system startup</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc0.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc0.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc0.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 0</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc1.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc1.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc1.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 1</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc2.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc2.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc2.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 2</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc3.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc3.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc3.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 3</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc4.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc4.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc4.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 4</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc5.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc5.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc5.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 5</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc6.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc6.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>etc/rc6.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 6</description>
 </directory>
@@ -607,7 +607,7 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/ckeditor</targetdir>
+  <targetdir dist='default'>home/httpd/html/ckeditor</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Rich Text Editor</description>
 </directory>
@@ -641,6 +641,7 @@ extensions</description>
   <categoryname>server readonly</categoryname>
   <description>jQuery JavaScript library -- css images</description>
 </directory>
+
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>/home/httpd/html/adm/jpicker</targetdir>
@@ -668,6 +669,61 @@ extensions</description>
 
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown/js</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/countdown/css</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery countdown timer</description>
+</directory>
+ 
+<!-- JQuery spellchecker plugin -->
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery spellchecker plugin</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/js</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery spellchecker plugin</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/css</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery spellchecker plugin</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/img</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery spellchecker plugin</description>
+</directory>
+
+<!-- JQuery nicescroll plugin -->
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/nicescroll</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JQuery nicescroll plugin</description>
+</directory>
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/dragmath/applet</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Formula editor applet directory and popups</description>
@@ -862,6 +918,12 @@ are viewable over the world-wide web</de
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/lonLCDfont</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>LCD font for remote control</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/lonDomLogos</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Logos for LON-CAPA domains</description>
@@ -874,6 +936,12 @@ are viewable over the world-wide web</de
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/lonTabs/dns_checksums</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>Version numbers and checksums</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/lonInterFace</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Page headers and graphical interface files</description>
@@ -980,7 +1048,7 @@ each list element consists of only two s
 <file>
 <source>loncom/loncapa.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa.conf</target>
 <categoryname>conf</categoryname>
 <description>
 <p>
@@ -1023,7 +1091,7 @@ MySQL database</td></tr>
 <file type="postaboutversion">
 <source>loncom/loncapa_apache.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_apache.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa_apache.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa_apache.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 The goal of this file is to implement all LON-CAPA specific
@@ -1041,9 +1109,22 @@ the www@localhost MySQL password, and br
 </description>
 </file>
 <file>
+<source>loncom/loncapa_apache_local.conf</source>
+<target dist='default'>etc/httpd/conf/loncapa_apache_local.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/startup.pl</target>
+<categoryname>static conf</categoryname>
+<description>
+Documentation file describing how to add domain-specific Apache configuration
+files, e.g., (loncapa_apache_localmsu.conf).
+loncapa_apache_local.conf needs to exist if no domain-specific file has so far
+been created so that Apache 2.4 will start, given that loncapa_apache.conf has:
+Include conf/loncapa_apache_local*.conf
+</description>
+</file>
+<file>
 <source>loncom/startup.pl</source>
 <target dist='default'>etc/httpd/conf/startup.pl</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/startup.pl</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/startup.pl</target>
 <categoryname>static conf</categoryname>
 <description>
 This file provides initializations for perl handlers.  It adjusts what
@@ -1054,7 +1135,7 @@ well as causing the Apache module to be
 </file>
 <link>
 <linkto>etc/apache2</linkto>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>
 etc/apache2/conf
 </target>
 <categoryname>symbolic link</categoryname>
@@ -1065,7 +1146,7 @@ symbolic link to directory /etc/apache2
 <file>
 <source>loncom/rewrites/loncapa_rewrite_off.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_rewrite.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa_rewrite.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/loncapa_rewrite.conf</target>
 <categoryname>conf</categoryname>
 <description>
 Default rewrite file. 
@@ -1077,7 +1158,7 @@ by setting: RewriteEngine off
 <source>loncom/rewrites/loncapa_rewrite_on.conf</source>
 <target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_on.conf</target>
 <target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_on.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/rewrites/loncapa_rewrite_on.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/rewrites/loncapa_rewrite_on.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to enable rewriting of
@@ -1088,7 +1169,7 @@ external requests for http:// to https:/
 <source>loncom/rewrites/loncapa_rewrite_off.conf</source>
 <target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_off.conf</target>
 <target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_off.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/rewrites/loncapa_rewrite_off.conf</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/rewrites/loncapa_rewrite_off.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to disable rewriting of
@@ -1253,6 +1334,16 @@ utility cgi script to view software vers
 </description>
 </file>
 <file>
+<source>loncom/cgi/lonmodulecheck.pl</source>
+<target dist='default'>home/httpd/cgi-bin/lonmodulecheck.pl</target>
+<categoryname>script</categoryname>
+<description>
+utility cgi script to check for differences between currently
+installed versions of LON-CAPA modules and those expected for the
+LON-CAPA release installed on the server.
+</description>
+</file>
+<file>
 <source>loncom/cgi/ping.pl</source>
 <target dist='default'>home/httpd/cgi-bin/ping.pl</target>
 <categoryname>script</categoryname>
@@ -1451,6 +1542,8 @@ man1.jpg;
 man1.jpg.meta;
 numerical.problem;
 numerical.problem.meta;
+numMultiAnswerUnordered.problem;
+numMultiAnswerUnordered.problem.meta;
 numPrePro.problem;
 numPrePro.problem.meta;
 Plot.problem.meta;
@@ -1514,6 +1607,15 @@ reaction_hint.problem.meta
 </fileglob>
 
 <file>
+  <source>loncom/interface/spellcheck.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/spellcheck.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+Ajax handler for the spellcheck Jquery plugin
+  </description>
+  <status>IN testing</status>
+</file>
+<file>
   <source>loncom/homework/insertlist.xml</source>
   <target dist='default'>home/httpd/lonTabs/insertlist.xml</target>
   <categoryname>static conf</categoryname>
@@ -1633,6 +1735,23 @@ List of all domains in the LON-CAPA netw
   </description>
 </file>
 
+<fileglob>
+<glob>*.tab</glob>
+<sourcedir>loncom/dns_checksums/</sourcedir>
+<targetdir dist='default'>
+home/httpd/lonTabs/dns_checksums/</targetdir>
+<categoryname>www static conf</categoryname>
+<description>
+Files containing version numbers and checksums for most LON-CAPA perl modules,
+perl scripts, cgi scripts, daemons, and a configuration file in each
+LON-CAPA release, starting with 2.11.0.RC1
+</description>
+<filenames>
+2.11.0.RC1.tab;
+2.11.0.RC2.tab;
+</filenames>
+</fileglob>
+
 <file>
   <source>loncom/loncaparevs.tab</source>
   <target dist='default'>home/httpd/lonTabs/loncaparevs.tab</target>
@@ -1653,6 +1772,17 @@ File holds paired data -- hostname:lonHo
 </file>
 
 <file>
+  <source>loncom/lonchksums.tab</source>
+  <target dist='default'>home/httpd/lonTabs/lonchksums.tab</target>
+  <categoryname>www conf</categoryname>
+  <description>
+File containing version numbers and checksums for most LON-CAPA perl modules,
+perl scripts, cgi scripts, daemons, and a configuration file for current
+server. Updated by loncron.
+  </description>
+</file>
+
+<file>
 <source>loncom/spare.tab</source>
 <target dist='default'>home/httpd/lonTabs/spare.tab</target>
 <categoryname>conf</categoryname>
@@ -1758,6 +1888,17 @@ file: nohist_courseids.db found in /home
 </description>
 </file>
 <file>
+<source>loncom/misc/checkforupdates.pl</source>
+<target dist='default'>home/httpd/perl/checkforupdates.pl</target>
+<categoryname>script</categoryname>
+<description>
+Perl script run by cron to check:
+(a) for differences between currently installed versions of LON-CAPA modules
+and those expected for the particular LON-CAPA release
+(b) if an updated LON-CAPA release is available from install.loncapa.org
+</description>
+</file>
+<file>
 <source>loncom/debugging_tools/seed_accesscount.pl</source>
 <target dist='default'>home/httpd/perl/seed_accesscount.pl</target>
 <categoryname>script</categoryname>
@@ -1994,16 +2135,6 @@ Allows www to change user passwords.
 <status>being updated</status>
 </file>
 <file>
-<source>loncom/lcuseradd</source>
-<target dist='default'>home/httpd/perl/lcuseradd</target>
-<categoryname>setuid script</categoryname>
-<description>
-Coordinates the system services and files in order to allow lond to add a
-new user.
-</description>
-<status>being updated</status>
-</file>
-<file>
 <source>loncom/lciptables</source>
 <target dist='default'>home/httpd/perl/lciptables</target>
 <categoryname>setuid script</categoryname>
@@ -2303,6 +2434,15 @@ Handler to put up simple page
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonextresedit.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonextresedit.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to edit external resource.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/interface/lonpickcode.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonpickcode.pm</target>
   <categoryname>handler</categoryname>
@@ -2339,20 +2479,31 @@ Handler for a DC to pick an author from
 <status>works/unverified</status>
 </file>
 <file>
-<source>loncom/interface/lonpickresource.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/lonpickresource.pm</target>
+<source>loncom/interface/lonpickuser.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonpickuser.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler to pick a resource or folder from the course contents
+Handler to pick a user from a directory search
 </description>
 <status>works/unverified</status>
 </file>
 <file>
-<source>loncom/interface/lonpickuser.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/lonpickuser.pm</target>
+<source>loncom/interface/loncourserespicker.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/loncourserespicker.pm</target>
 <categoryname>handler</categoryname>
 <description>
-Handler to pick a user from a directory search
+Provides interface to select resources/folders from a course
+(e.g., for IMS export, or choosing content for exam blocking).
+</description>
+<status>works/unverified</status>
+</file>
+<file>
+<source>loncom/interface/londependencies.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/londependencies.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Provides interface for uploading, replacing and deleting files which
+are (or used to be) dependencies for an HTML page uploaded directly to a course.
 </description>
 <status>works/unverified</status>
 </file>
@@ -2685,11 +2836,16 @@ anno.gif;
 anot.gif;
 anot2.gif;
 authorRemote.gif;
+author_example_directory.gif;
+author_new_content.gif;
+author_top_menu.gif;
+back.gif;
 bchat.gif;
 blog.gif;
 catalog.gif;
 ccat.gif;
 chat.gif;
+chkrole.gif;
 chrt.gif;
 com.gif;
 constructionSpace.gif;
@@ -2707,6 +2863,7 @@ dynamic_piecewise.gif;
 dynamic_piecewise2.gif;
 dynamic_plot.gif;
 dynamic_plot2.gif;
+editmap.gif;
 edit-find-replace.gif;
 edit-redo.gif;
 edit-undo.gif;
@@ -2716,10 +2873,14 @@ extres.gif;
 fdbk.gif;
 feedback.gif;
 formulaResponse.gif;
+forw.gif;
 FPRexamples.gif;
 fromfile.gif;
 grds.gif;
 grps.gif;
+help.gif;
+html_page_plaintext.gif;
+html_page_richtext.gif;
 list-add.gif;
 login.gif;
 lonhelpheader.gif;
@@ -2742,10 +2903,12 @@ mapStraightened.gif;
 mapTwoResources.gif;
 messalog.gif;
 mngcu.gif;
+multiple_choice_problem_menu.gif;
 nav.gif;
 navigation.gif;
 network-workgroup.gif;
 new.gif;
+newmsg.gif;
 numericalResponse1.gif;
 numericalResponseEditor.gif;
 numericalResponseSlopeProblem.gif;
@@ -2760,6 +2923,9 @@ pref.gif;
 preferences-desktop-font.gif;
 preferences-desktop-locale.gif;
 preferences-desktop-theme.gif;
+problem_editing_colorful.gif;
+problem_editing_xml.gif;
+problem_testing.gif;
 prt.gif;
 publishMetadata.gif;
 radioResponse2.gif;
@@ -2786,10 +2952,10 @@ subtimpl.gif;
 survey_rep.gif;
 syllabus.gif;
 system-users.gif;
+tolastloc.gif;
 turning.gif;
 uploadscores.gif;
 uplusr.gif;
-vbkm.gif;
 verify.gif;
 wishlist.gif;
 wishlist-link.gif;
@@ -2834,11 +3000,16 @@ anno.eps;
 anot.eps;
 anot2.eps;
 authorRemote.eps;
+author_example_directory.eps;
+author_new_content.eps;
+author_top_menu.eps;
+back.eps;
 bchat.eps;
 blog.eps;
 catalog.eps;
 ccat.eps;
 chat.eps;
+chkrole.eps;
 chrt.eps;
 com.eps;
 constructionSpace.eps;
@@ -2856,6 +3027,7 @@ dynamic_piecewise.eps;
 dynamic_piecewise2.eps;
 dynamic_plot.eps;
 dynamic_plot2.eps;
+editmap.eps;
 edit-find-replace.eps;
 edit-redo.eps;
 edit-undo.eps;
@@ -2865,10 +3037,14 @@ extres.eps;
 fdbk.eps;
 feedback.eps;
 formulaResponse.eps;
+forw.eps;
 FPRexamples.eps;
 fromfile.eps;
 grds.eps;
 grps.eps;
+help.eps;
+html_page_plaintext.eps;
+html_page_richtext.eps;
 list-add.eps;
 lonhelpheader.eps;
 login.eps;
@@ -2891,10 +3067,12 @@ mapStraightened.eps;
 mapTwoResources.eps;
 messalog.eps;
 mngcu.eps;
+multiple_choice_problem_menu.eps;
 nav.eps;
 navigation.eps;
 network-workgroup.eps;
 new.eps;
+newmsg.eps;
 numericalResponse1.eps;
 numericalResponseEditor.eps;
 numericalResponseSlopeProblem.eps;
@@ -2908,6 +3086,9 @@ port.eps;
 preferences-desktop-font.eps;
 preferences-desktop-locale.eps;
 preferences-desktop-theme.eps;
+problem_editing_colorful.eps;
+problem_editing_xml.eps;
+problem_testing.eps;
 prt.eps;
 publishMetadata.eps;
 radioResponse2.eps;
@@ -2934,10 +3115,10 @@ subtimpl.eps;
 survey_rep.eps;
 syllabus.eps;
 system-users.eps;
+tolastloc.eps;
 turning.eps;
 uploadscores.eps;
 uplusr.eps;
-vbkm.eps;
 verify.eps;
 wishlist.eps;
 wishlist-link.eps;
@@ -2972,6 +3153,7 @@ Ambiguous_Reference.tex;
 Analysis_Analyze_Over.tex;
 Analyze_Problem.tex;
 Answer_Date.tex;
+Answer_Display_Overview.tex;
 Annotation.tex;
 Authentication.tex;
 Auth_Options.tex;
@@ -2997,6 +3179,7 @@ Authoring_ImageResponse.tex;
 Authoring_Input_Tags.tex;
 Authoring_Internal_Tags.tex;
 Authoring_Intro.tex;
+Authoring_Library_Scripts.tex;
 Authoring_Math_Editor.tex;
 Authoring_NumericalResponse.tex;
 Authoring_OptionResponse.tex;
@@ -3010,9 +3193,11 @@ Authoring_Response_Tag_Intro.tex;
 Authoring_Scripting_Tags.tex;
 Authoring_Spreadsheet.tex;
 Authoring_Structure_Tags.tex;
+Authoring_Surveys.tex;
 Authoring_XML_Intro.tex;
 Author_LON-CAPA_Introduction.tex;
 Author_Manual_Title_Page.tex;
+Author_Menu.tex;
 Author_Numerical_and_Formula.tex;
 Author_Remote_Control.tex;
 Batch_Creation.tex;
@@ -3057,6 +3242,7 @@ Chatting.tex;
 Clicker_Registration.tex;
 Coauthor.tex;
 Construction_Space_Overview.tex;
+Content_Page_Overview.tex;
 Contextual_Help.tex;
 Course_Add_Other.tex;
 Course_Add_Student.tex;
@@ -3099,6 +3285,7 @@ Course_Prefs_Spreadsheet.tex;
 Course_Prefs_Discussions.tex;
 Course_Prefs_General.tex;
 Course_Prefs_Other.tex;
+Course_Prefs_Settings.tex;
 Course_Problem_Weight.tex;
 Course_Requests.tex;
 Course_Request_Access_End.tex;
@@ -3129,11 +3316,15 @@ Course_User_Parameter.tex;
 Course_View_Class_List.tex;
 Create_Course.tex;
 Creating_A_Course_Intro.tex;
+Creating_Content_Overview.tex;
 Creating_Domain_Coordinators.tex;
+Creating_Formula_Response.tex;
 Creating_Groups.tex;
+Creating_Math_Response_Problems.tex;
 Creating_New_Content_Pages.tex;
 Creating_Online_Problems.tex;
 Creating_Radio_Response_Problems.tex;
+Custom_Response_Problem_Creation.tex;
 Custom_Response_Problems.tex;
 Deleting_Domain_Coordinators.tex;
 Developer_Manual_Title_Page.tex;
@@ -3152,14 +3343,19 @@ Docs_Adding_Syllabus.tex;
 Docs_Alternatives.tex;
 Docs_Check_Resource_Versions.tex;
 Docs_Creating_From_Template.tex;
+Docs_Course_Roster.tex;
+Docs_Dropbox.tex;
 Docs_Dump_Course_Docs.tex;
 Docs_Export_Course_Docs.tex;
 Docs_Editing_Templated_Pages.tex;
 Docs_Essay.tex;
+Docs_Import_Stored_Link.tex;
+Docs_Importing_IMS_Course.tex;
 Docs_Importing_LON-CAPA_Resource.tex;
 Docs_Load_Map.tex;
 Docs_Main_Course_Documents.tex;
 Docs_Navigate_Content.tex;
+Docs_Numerical_Response.tex;
 Docs_Option_Response.tex;
 Docs_Overview.tex;
 Docs_Radio.tex;
@@ -3170,6 +3366,7 @@ Docs_String_Response.tex;
 Docs_Supplemental.tex;
 Docs_Uploading_From_Harddrive.tex;
 Docs_Verify_Content.tex;
+Docs_Web_Page.tex;
 Domain_Configuration_Auto_Creation.tex;
 Domain_Configuration_Auto_Enrollment.tex;
 Domain_Configuration_Auto_Updates.tex;
@@ -3193,6 +3390,7 @@ Domain_Coordination_Overview.tex;
 Domain_Crontab_Entries.tex;
 Domain_Manual_Title_Page.tex;
 Due_Date.tex;
+Dynamic_Plot_Overview.tex;
 Edit_Syllabus.tex;
 Error.tex;
 exam_answers.tex;
@@ -3220,6 +3418,7 @@ Formula_Response_Limitations.tex;
 Formula_Response_Problems.tex;
 Formula_Response_Sampling.tex;
 Formula_Tolerance.tex;
+Function_Plot_Response_Overview.tex;
 Function_Plot_Response_Background_Plot.tex;
 Function_Plot_Response_Evaluation_Rule.tex;
 Function_Plot_Response_Rule_Set.tex;
@@ -3455,6 +3654,9 @@ Auth_Options.tex;
 Authoring_Math_Editor.tex;
 Contextual_Help.tex;
 Cascading_Parameters.tex;
+Change_Colors.tex;
+Change_Discussion_Display.tex;
+Change_Password.tex;
 Course_Convert_To_CSV.tex;
 Course_Create_Class_List.tex;
 Course_Self_Enrollment.tex;
@@ -3475,6 +3677,25 @@ Generation.tex;
 Metadata_Description.tex;
 Navigation_Screen.tex;
 Parameter_Overview.tex;
+Portfolio_About.tex;
+Portfolio_AddFiles.tex;
+Portfolio_Catalog.tex;
+Portfolio_ChangeDirectory.tex;
+Portfolio_CreateDirectory.tex;
+Portfolio_DeleteFile.tex;
+Portfolio_FileAction.tex;
+Portfolio_FileList.tex;
+Portfolio_OpenFile.tex;
+Portfolio_RenameFile.tex;
+Portfolio_ShareFile.tex;
+Portfolio_ShareFile_ChangeSetting.tex;
+Portfolio_ShareFile_Conditional.tex;
+Portfolio_ShareFile_SetAccess.tex;
+Portfolio_ShareFile_StopAccess.tex;
+Prefs_About_Me.tex;
+Prefs_Language.tex;
+Prefs_Messages.tex;
+Prefs_Screen_Name_Nickname.tex;
 Problem_Parameters.tex;
 Publishing_Copyright.tex;
 Publishing_Keywords.tex;
@@ -4097,6 +4318,7 @@ home/httpd/lib/perl/Apache/localize/</ta
 Translation files.
 </description>
 <filenames>
+en.pm;
 de.pm;
 pt.pm;
 fr.pm;
@@ -4106,6 +4328,7 @@ ru.pm;
 fa.pm;
 ar.pm;
 es.pm;
+he.pm;
 x_chef.pm;
 zh.pm;
 </filenames>
@@ -4413,6 +4636,7 @@ jsMath is a Javascript solution to conve
 black.gif;
 blank.gif;
 COPYING.txt;
+FONTSVERSION;
 jsMath-BaKoMa-fonts.js;
 jsMath-autoload.html;
 jsMath-controls.html;
@@ -4441,7 +4665,7 @@ jsMath-old-browsers.js;
     Server side png fonts for use by jsMath
   </description>
   <installscript>
-commands /home/httpd/html/adm
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/jsMath/commands;
@@ -4450,7 +4674,7 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
 </file>
 
 <file>
-  <source>loncom/html/adm/MathJax/mathjax-MathJax-v1.1a-0-g1697387.zip</source>
+  <source>loncom/html/adm/MathJax/mathjax-MathJax-v2.1-241378e.zip</source>
   <target dist='default'>home/httpd/html/adm/MathJax</target>
   <categoryname>script</categoryname>
   <description>
@@ -4460,29 +4684,48 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
    unzipping the file, making it look cleaner in the /home/.../adm/ directory
   </description>
   <installscript>
-commands /home/httpd/html/adm/MathJax
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/MathJax/commands;
-loncom/html/adm/MathJax/mathjax-MathJax-v1.1a-0-g1697387.zip;
+loncom/html/adm/MathJax/VERSION;
+loncom/html/adm/MathJax/mathjax-MathJax-v2.1-241378e.zip;
+  </dependencies>
+</file>
+
+<file>
+  <source>loncom/html/adm/geogebra/geogebra_html5.tar.gz</source>
+  <target dist='default'>home/httpd/html/adm/geogebra/web</target>
+  <categoryname>script</categoryname>
+  <description>
+   HTML5/JavaScript Version of GeoGebra
+  </description>
+  <installscript>
+commands
+  </installscript>
+  <dependencies>
+loncom/html/adm/geogebra/commands;
+loncom/html/adm/geogebra/VERSION;
+loncom/html/adm/geogebra/geogebra_html5.tar.gz;
   </dependencies>
 </file>
 
 <file>
-  <source>loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz</source>
-  <target dist='default'>home/httpd/html/adm/ckeditor</target>
+  <source>loncom/html/adm/ckeditor/ckeditor_3.6.6.1.tar.gz</source>
+  <target dist='default'>home/httpd/html/ckeditor</target>
   <categoryname>script</categoryname>
   <description>
    GUI HTML Editor, scripted installation decompress the tarball and
    installs the loncapa config.js file
   </description>
   <installscript>
-commands /home/httpd/html/
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/ckeditor/commands;
-loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz;
+loncom/html/adm/ckeditor/ckeditor_3.6.6.1.tar.gz;
 loncom/html/adm/ckeditor/loncapaconfig.js;
+loncom/html/adm/ckeditor/VERSION;
   </dependencies>
 </file>
 
@@ -4575,7 +4818,7 @@ JQuery colorpicker javascript library
 JQuery colorpicker javascript library css files
   </description>
   <filenames>
-    jpicker-1.1.6.min.css;
+    jPicker-1.1.6.min.css;
   </filenames>
 </fileglob>
 
@@ -4601,6 +4844,150 @@ JQuery color picker javascript library i
   </filenames>
 </fileglob>
 
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/countdown/js/</targetdir>
+  <categoryname>interface file </categoryname>
+  <description>
+JQuery countdown timer javascript files
+  </description>
+  <filenames>
+    jquery.countdown-ar.js;
+    jquery.countdown-bg.js;
+    jquery.countdown-bn.js;
+    jquery.countdown-ca.js;
+    jquery.countdown-cs.js;
+    jquery.countdown-da.js;
+    jquery.countdown-de.js;
+    jquery.countdown-el.js;
+    jquery.countdown-es.js;
+    jquery.countdown-et.js;
+    jquery.countdown-fa.js;
+    jquery.countdown-fi.js;
+    jquery.countdown-fr.js;
+    jquery.countdown-gl.js;
+    jquery.countdown-he.js;
+    jquery.countdown-hr.js;
+    jquery.countdown-hu.js;
+    jquery.countdown-id.js;
+    jquery.countdown-it.js;
+    jquery.countdown-ja.js;
+    jquery.countdown.js;
+    jquery.countdown-ko.js;
+    jquery.countdown-lt.js;
+    jquery.countdown-lv.js;
+    jquery.countdown.min.js;
+    jquery.countdown-ms.js;
+    jquery.countdown-my.js;
+    jquery.countdown-nb.js;
+    jquery.countdown-nl.js;
+    jquery.countdown.pack.js;
+    jquery.countdown-pl.js;
+    jquery.countdown-pt-BR.js;
+    jquery.countdown-ro.js;
+    jquery.countdown-ru.js;
+    jquery.countdown-sk.js;
+    jquery.countdown-sl.js;
+    jquery.countdown-sr.js;
+    jquery.countdown-sr-SR.js;
+    jquery.countdown-sv.js;
+    jquery.countdown-th.js;
+    jquery.countdown-tr.js;
+    jquery.countdown-uk.js;
+    jquery.countdown-vi.js;
+    jquery.countdown-zh-CN.js;
+    jquery.countdown-zh-TW.js;
+   </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.css</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery countdown timer CSS files
+  </description>
+  <filenames>
+    jquery.countdown.css;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.gif</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery countdown timer Image file for Glowing countdown
+  </description>
+  <filenames>
+    countdownGlowing.gif;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/countdown/</sourcedir> 
+  <targetdir dist='default'>home/httpd/html/adm/countdown/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+JQuery countdown timer Image file for LED style countdown
+  </description>
+  <filenames>
+    countdownLED.png;
+  </filenames>
+</fileglob>
+
+<!-- JQuery spellchecker plugin -->
+
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/spellcheck/js/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/js/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    jquery.spellchecker.min.js;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.css</glob>
+  <sourcedir>loncom/html/adm/spellcheck/css/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker.css;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/spellcheck/img/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/img/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker_shadow.png;
+    spellcheck.png;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.gif</glob>
+  <sourcedir>loncom/html/adm/spellcheck/img/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/img/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker_bg.gif;
+  </filenames>
+</fileglob>
 
 <fileglob>
   <glob>*.*</glob>
@@ -4654,6 +5041,34 @@ jQuery custom distribution of version 1.
   </filenames>
 </fileglob>
 
+<!-- JQuery nicescroll plugin -->
+
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/nicescroll/js/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/nicescroll/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+jQuery nicescroll plugin javascript
+  </description>
+  <filenames>
+  jquery.nicescroll.min.js;
+  </filenames>
+</fileglob>
+
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/nicescroll/images/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/nicescroll/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+jQuery nicescroll plugin image
+  </description>
+  <filenames>
+  zoomico.png;
+  </filenames>
+</fileglob>
+
 <file>
 <source>loncom/interface/lontest.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lontest.pm</target>
@@ -4879,15 +5294,6 @@ Handles a searches inside courses/commun
 <status>works/unverified</status>
 </file>
 <file>
-<source>loncom/interface/lonindexcourse.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/lonindexcourse.pm</target>
-<categoryname>handler</categoryname>
-<description>
-Course/community Indexer
-</description>
-<status>works/unverified</status>
-</file>
-<file>
 <source>loncom/interface/lonmysql.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonmysql.pm</target>
 <categoryname>handler</categoryname>
@@ -5178,6 +5584,15 @@ Displays the Main menu
   <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonremote.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonremote.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to launch and collapse the remote control.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/interface/portfolio.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/portfolio.pm</target>
 <categoryname>handler</categoryname>
@@ -5221,6 +5636,15 @@ Creates horizontal menubar in advanced R
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/html/res/adm/pages/homeworkmenu.html</source>
+<target dist='default'>home/httpd/html/res/adm/pages/homeworkmenu.html</target>
+<categoryname>handler</categoryname>
+<description>
+Homework remote control.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/html/res/adm/pages/chatroom.html</source>
 <target dist='default'>home/httpd/html/res/adm/pages/chatroom.html</target>
 <categoryname>handler</categoryname>
@@ -5874,7 +6298,7 @@ by the URL-related pattern syntax:
 </file>
 <file>
   <source>loncom/auth/lonshibacc.pm</source>
-  <target dist='default'>home/httpd/lib/perl/Apache/lonashibacc.pm</target>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonshibacc.pm</target>
   <categoryname>handler</categoryname>
   <description>Authorization handler used to remove trailing @internet dom 
                from Shibboleth authenticated username (e.g., @mit.edu).
@@ -5882,6 +6306,14 @@ by the URL-related pattern syntax:
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/auth/lonnoshib.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonnoshib.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Content handler for /adm/sso when Shibboleth auth is inactive.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
   <source>loncom/html/adm/sso</source>
   <target dist='default'>home/httpd/html/adm/sso</target>
   <categoryname>interface file</categoryname>
@@ -5903,14 +6335,6 @@ by the URL-related pattern syntax:
 <description>copying of uploaded files</description>
 </file>
 <file>
-<source>loncom/auth/lonshibacc.pm</source>
-<target dist='default'>home/httpd/lib/perl/Apache/lonshibacc.pm</target>
-<categoryname>handler</categoryname>
-<description>
-Handler for Shibboleth single signon
-</description>
-</file>
-<file>
 <source>loncom/auth/lonroles.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonroles.pm</target>
 <categoryname>handler</categoryname>
@@ -6088,7 +6512,7 @@ Domain information serving.
 <file>
 <source>loncom/mime.types</source>
 <target dist='default'>etc/httpd/conf/mime.types</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/mime.types</target>
+<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/apache2/mime.types</target>
 <categoryname>www static conf</categoryname>
 <description>Expanded mime.types</description>
 </file>
@@ -6158,22 +6582,6 @@ javascript for horizontal menubar in RAT
 </description>
 </file>
 <file>
-<source>rat/client/extpickcode.html</source>
-<target dist='default'>home/httpd/html/adm/rat/extpickcode.html</target>
-<categoryname>interface file</categoryname>
-<description>
-javascript
-</description>
-</file>
-<file>
-<source>rat/client/extpickframe.html</source>
-<target dist='default'>home/httpd/html/adm/rat/extpickframe.html</target>
-<categoryname>interface file</categoryname>
-<description>
-javascript
-</description>
-</file>
-<file>
 <source>rat/client/map.html</source>
 <target dist='default'>home/httpd/html/adm/rat/map.html</target>
 <categoryname>interface file</categoryname>
@@ -6640,6 +7048,15 @@ tested
   <status>works/verified</status>
 </file>
 <file>
+  <source>loncom/Lond.pm</source>
+  <target dist='default'>home/httpd/lib/perl/LONCAPA/Lond.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+     Encapsulates functionality used by lond and lonnet.
+  </description>
+  <status>in progress</status>
+</file>
+<file>
   <source>loncom/LondConnection.pm</source>
   <target dist='default'>home/httpd/lib/perl/LONCAPA/LondConnection.pm</target>
   <categoryname>system file</categoryname>
@@ -6717,6 +7134,16 @@ for socket-based communication between L
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/configuration/Checksumming.pm</source>
+<target dist='default'>home/httpd/lib/perl/LONCAPA/Checksumming.pm</target>
+<categoryname>system file</categoryname>
+<description>
+Provides routine to checksum perl modules, perl scripts, cgi scripts,
+language lexicons, and static configuration file on current server
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/ConfigFileEdit.pm</source>
 <target dist='default'>home/httpd/lib/perl/LONCAPA/ConfigFileEdit.pm</target>
 <categoryname>system file</categoryname>
@@ -6752,6 +7179,8 @@ compiles/tth.so.i386.perl.5.12;
 compiles/tth.so.x86_64.perl.5.12;
 compiles/tth.so.i386.perl.5.14;
 compiles/tth.so.x86_64.perl.5.14;
+compiles/tth.so.i386.perl.5.16;
+compiles/tth.so.x86_64.perl.5.16;
 compiles/tth.so.i386.debian5;
 compiles/tth.so.x86_64.debian5
 </dependencies>
@@ -7120,6 +7549,61 @@ tmcc.tab;
 </fileglob>
 <fileglob>
 <glob>*.gif</glob>
+<sourcedir>loncom/html/adm/lonLCDfont/</sourcedir>
+<targetdir dist='default'>home/httpd/html/adm/lonLCDfont/</targetdir>
+<categoryname>graphic file</categoryname>
+<description>LON-CAPA remote control LCD font</description>
+<filenames>
+0.gif;
+1.gif;
+2.gif;
+3.gif;
+4.gif;
+5.gif;
+6.gif;
+7.gif;
+8.gif;
+9.gif;
+a.gif;
+b.gif;
+c.gif;
+d.gif;
+e.gif;
+f.gif;
+g.gif;
+h.gif;
+i.gif;
+j.gif;
+k.gif;
+l.gif;
+m.gif;
+n.gif;
+o.gif;
+p.gif;
+q.gif;
+r.gif;
+s.gif;
+t.gif;
+u.gif;
+v.gif;
+w.gif;
+x.gif;
+y.gif;
+z.gif;
+ä.gif;
+ö.gif;
+ü.gif;
+ä.gif;
+ö.gif;
+ü.gif;
+colon.gif;
+hyphen.gif;
+slash.gif;
+space.gif;
+</filenames>
+</fileglob>
+<fileglob>
+<glob>*.gif</glob>
 <sourcedir>loncom/html/res/adm/pages/pt/</sourcedir>
 <targetdir dist='default'>home/httpd/html/res/adm/pages/pt/</targetdir>
 <categoryname>graphic file</categoryname>
@@ -7149,7 +7633,6 @@ pref_pt.gif;
 prt_pt.gif;
 res_pt.gif;
 roles_pt.gif;
-sbkm_pt.gif;
 spacer_pt.gif;
 sprs_pt.gif;
 src_pt.gif;
@@ -7164,28 +7647,93 @@ vbkm_pt.gif;
 <categoryname>graphic file</categoryname>
 <description>icons used for the entire LON-CAPA user interface</description>
 <filenames>
+alnk.gif;
+anno.gif;
+anot.gif;
+anot2.gif;
+back.gif;
+bchat.gif;
+bkm.gif;
+blog.gif;
+brws.gif;
+catalog.gif;
+ccat.gif;
+ccrs.gif;
 chat.gif;
+chrt.gif;
 close-all-folders.gif;
+close-navigation.gif;
+clst.gif;
+com.gif;
+conf.gif;
+courses.gif;
+cprv.gif;
+crsconf.gif;
+cstr.gif;
+del.gif;
+dempty.gif;
 dempty.gif;
+docs.gif;
 edittoplevel.gif;
+egrd.gif;
 empty.gif;
+enrl.gif;
+eval.gif;
+fdbk.gif;
 feedback.gif;
+forw.gif;
+grds.gif;
+grps.gif;
 group.gif;
 help.gif;
 info.gif;
+keys.gif;
 ledblink.gif;
 ledgreen.gif;
 ledoff.gif;
 ledon.gif;
+ledsend.gif;
+list.gif;
+logout.gif;
+mail.gif;
 mark-discussionentries-read.gif;
+mrk.gif;
+nav.gif;
+new.gif;
 next.gif;
 nothumb.gif;
 open-all-folders.gif;
 open-first-problem.gif;
+pdfupload.gif;
+parm.gif;
+pcstr.gif;
+pgrd.gif;
+port.gif;
+pparm.gif;
+pref.gif;
+prt.gif;
+pub.gif;
 qempty.gif;
+rcrs.gif;
+refresh.gif;
+reload.gif;
+remotebg.gif;
+res.gif;
+roles.gif;
+rsrv.gif;
+rtrv.gif;
+sctr.gif;
 show-all.gif;
 show-incomplete-problems.gif;
-star.gif;
+slnk.gif;
+spacer.gif;
+sprs.gif;
+src.gif;
+srvr.gif;
+start-navigation.gif;
+stat.gif;
+subm.gif;
+title.gif;
 </filenames>
 </fileglob>
 <fileglob>
@@ -7214,7 +7762,6 @@ pgrd.png;
 pref.png;
 roles.png;
 sprs.png;
-vbkm.png;
 anot.png;
 anot2.png;
 blog.png;
@@ -7231,14 +7778,17 @@ port.png;
 prt.png;
 rcrs.png;
 rsrv.png;
-sbkm.png;
+slnk.png;
 src.png;
 srvr.png;
 subm.png;
 thumbsup.png;
 thumbsup_gray.png;
+thumbsup_novote.png;
 thumbsdown.png;
 thumbsdown_gray.png;
+thumbsdown_novote.png;
+webpage.png;
 back.png;
 catalog.png;
 com.png;
@@ -7262,10 +7812,10 @@ mngcu.png;
 prob_ana.png;
 process-stop.png;
 role_hotlist.png;
-reload.png;
 self_enroll.png;
 survey_rep.png;
 subdocs.png;
+tolastloc.png;
 uplusr.png;
 </filenames>
 </fileglob>
@@ -7276,20 +7826,22 @@ uplusr.png;
 <categoryname>graphic file</categoryname>
 <description>graphical icons used in submenus</description>
 <filenames>
+alnk.png;
 aboutme.png;
 addClickerInfoFile.png;
 anonsurveythreshold.png;
-bubblesheet.png;
 ccatconf.png;
+ccat-22x22.png;
 chat.png;
 comblock.png;
 contact-new.png;
+contact-new-22x22.png;
 coprplot.png;
 crsnew.png;
 dialog-information.png;
+docs-22x22.png;
 document-open.png;
 document-properties.png;
-download_sub.png;
 dropbox.png;
 dump.png;
 edit-copy.png;
@@ -7297,8 +7849,10 @@ edit-find-replace.png;
 edit-find.png;
 edit-mode-22x22.png;
 edit-redo.png;
+edit-redo-22x22.png;
 edit-select-all.png;
 edit-undo.png;
+edit-undo-22x22.png;
 emblem-photos.png;
 emblem-readonly.png;
 emblem-system.png;
@@ -7307,9 +7861,6 @@ folder-new.png;
 folder-new-22x22.png;
 format-justify-fill.png;
 fromfile.png;
-grade_PageFolder.png;
-grade_students.png;
-grading_table.png;
 groupportfolio.png;
 groupportfolioquota.png;
 grp_add.png;
@@ -7319,8 +7870,10 @@ ims.png;
 imsexport.png;
 link-new-22x22.png;
 list-add.png;
+list-add-22x22.png;
 log.png;
 mail-message-new.png;
+mail-message-new-22x22.png;
 mail-reply-all.png;
 mail-reply-sender.png;
 messalog.png;
@@ -7335,29 +7888,35 @@ preferences-desktop-remote-desktop.png;
 preferences-desktop-theme.png;
 preferences-desktop-wallpaper.png;
 preferences-system-windows.png;
-receipt_number.png;
+rcrs-22x22.png;
 recover.png;
 remotecontrol.png;
 resversion.png;
+role_hotlist-22x22.png;
+rsrv-22x22.png;
 save-22x22.png;
 scoreupfrm.png;
 selfenrl-queue.png;
+selfenrl-queue-22x22.png;
 sequence.png;
 simple.png;
 simpprob.png;
 start-here.png;
+start-here-22x22.png;
 subtimpl.png;
 syllabus.png;
 symbs.png;
 system-lock-screen.png;
 system-users.png;
-ungrade_sub.png;
+timer.png;
+trck-22x22.png;
 uplcrs.png;
 uploadscores.png;
 verify.png;
 view-mode-22x22.png;
 wishlist.png;
 wishlist-link.png;
+wishlist-link-lighter.png;
 </filenames>
 </fileglob>
 <file>
@@ -7369,6 +7928,14 @@ wishlist-link.png;
 </description>
 </file>
 <file>
+<source>loncom/html/res/adm/pages/imgmaps.html</source>
+<target dist='default'>home/httpd/html/res/adm/pages/imgmaps.html</target>
+<categoryname>interface file</categoryname>
+<description>
+image maps for the LON-CAPA remote control
+</description>
+</file>
+<file>
 <source>loncom/html/res/adm/pages/index.html</source>
 <target dist='default'>home/httpd/html/res/adm/pages/index.html</target>
 <categoryname>interface file</categoryname>
@@ -7376,6 +7943,14 @@ wishlist-link.png;
 welcoming page to the LON-CAPA system upon login
 </description>
 </file>
+<file>
+<source>loncom/html/res/adm/pages/menu.html</source>
+<target dist='default'>home/httpd/html/res/adm/pages/menu.html</target>
+<categoryname>interface file</categoryname>
+<description>
+renders the HTML (including image maps) for the LON-CAPA remote control
+</description>
+</file>
 <fileglob>
 <glob>*.gif</glob>
 <sourcedir>loncom/html/res/adm/pages/indexericons/</sourcedir>
@@ -7607,7 +8182,7 @@ file that allows setuid password privile
 <file>
 <source>loncom/init.d/loncontrol</source>
 <target dist='default'>etc/rc.d/init.d/loncontrol</target>
-<target dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</target>
+<target dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/init.d/loncontrol</target>
 <categoryname>root script</categoryname>
 <description>
 Controls the launching/halting of lonc, lond, and lonsql processes.
@@ -7615,7 +8190,7 @@ Controls the launching/halting of lonc,
 </file>
 <link>
 <linkto dist='default'>etc/rc.d/init.d/loncontrol</linkto>
-<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</linkto>
+<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>etc/init.d/loncontrol</linkto>
 <target dist='default'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
@@ -7625,7 +8200,7 @@ etc/rc.d/rc4.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>
+<target='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
 etc/rc.d/rc2.d/K05loncontrol;
@@ -7633,7 +8208,7 @@ etc/rc.d/rc3.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12'>
 etc/rc0.d/K05loncontrol;
 etc/rc1.d/K05loncontrol;
 etc/rc2.d/S95loncontrol;
@@ -7648,13 +8223,13 @@ symbolic links to /etc/rc.d/init.d/lonco
 </description>
 </link>
 
-<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
+<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 sles9 sles10 sles11">
   <source>loncom/init.d/loncontrol</source>
   <target>etc/rc.d/</target>
   <description>
     setup loncontrol to run at boot
   </description>
-  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
+  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 sles9 sles10 sles11">
 -c 'chkconfig --del loncontrol;chkconfig loncontrol 35;chkconfig --list loncontrol'
   </installscript>
   <dependencies>
@@ -7941,6 +8516,7 @@ login_count.pl;
 modify_config_files.pl;
 move_construction_spaces.pl;
 parse_scantron.pl;
+rebuild_db_from_hist.pl;
 seed_accesscount.pl;
 stress.pl;
 testkerberos.pl;