--- doc/loncapafiles/loncapafiles.lpml	2012/05/24 01:36:42	1.800
+++ doc/loncapafiles/loncapafiles.lpml	2015/06/29 15:41:56	1.921
@@ -2,7 +2,7 @@
  "http://lpml.sourceforge.net/DTD/lpml.dtd">
 <!-- loncapafiles.lpml -->
 
-<!-- $Id: loncapafiles.lpml,v 1.800 2012/05/24 01:36:42 raeburn Exp $ -->
+<!-- $Id: loncapafiles.lpml,v 1.921 2015/06/29 15:41:56 damieng Exp $ -->
 
 <!--
 
@@ -259,7 +259,7 @@ echo '**********************************
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/httpd/conf</targetdir>
   <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/apache2</targetdir>
   <categoryname>standard</categoryname>
   <description>web configuration files</description>
 </directory>
@@ -267,7 +267,7 @@ echo '**********************************
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>etc/httpd/conf/rewrites</targetdir>
   <targetdir dist='suse9.2 suse9.3 sles9'>etc/httpd/rewrites</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/apache2/rewrites</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/apache2/rewrites</targetdir>
   <categoryname>standard</categoryname>
   <description>
   default configuration files to enable/disable http:// -> https:// rewrites
@@ -283,56 +283,56 @@ echo '**********************************
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/init.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/init.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/init.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run during system startup</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc0.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc0.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc0.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 0</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc1.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc1.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc1.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 1</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc2.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc2.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc2.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 2</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc3.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc3.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc3.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 3</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc4.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc4.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc4.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 4</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc5.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc5.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc5.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 5</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>etc/rc.d/rc6.d</targetdir>
-  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>etc/rc6.d</targetdir>
+  <targetdir dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14 suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>etc/rc6.d</targetdir>
   <categoryname>standard</categoryname>
   <description>scripts that run for run-level 6</description>
 </directory>
@@ -455,6 +455,12 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/lib/perl/Apache/math_parser</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>location of LON-CAPA math parser</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/lib/perl/HTML</targetdir>
   <categoryname>server readonly</categoryname>
   <description>location of HTML specific perl module fixes and additions
@@ -559,6 +565,12 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/jsme</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>JSME support files</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/jmol</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Jmol files</description>
@@ -607,7 +619,19 @@ extensions</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/ckeditor</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/quicksearch</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>Author space quick search</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/adm/LC_math_editor </targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>LON-CAPA math editor</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/html/ckeditor</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Rich Text Editor</description>
 </directory>
@@ -685,44 +709,54 @@ extensions</description>
   <categoryname>server readonly</categoryname>
   <description>JQuery countdown timer</description>
 </directory>
-  
-
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/codemirror</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet directory and popups</description>
+  <description>Codemirror</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/jQuery/addons</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>jQuery addons</description>
+</directory>
+<!-- JQuery spellchecker plugin -->
+
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet classes</description>
+  <description>JQuery spellchecker plugin</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/HotEqn</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/js</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet HotEqn classes and jar</description>
+  <description>JQuery spellchecker plugin</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/Display</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/css</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet display</description>
+  <description>JQuery spellchecker plugin</description>
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/lang</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/spellchecker/img</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet languages</description>
+  <description>JQuery spellchecker plugin</description>
 </directory>
+
+<!-- JQuery nicescroll plugin -->
+
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/formats</targetdir>
+  <targetdir dist='default'>/home/httpd/html/adm/nicescroll</targetdir>
   <categoryname>server readonly</categoryname>
-  <description>Formula editor applet classes formats (LaTeX, Maxima, etc)</description>
+  <description>JQuery nicescroll plugin</description>
 </directory>
+
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/helper</targetdir>
@@ -805,6 +839,7 @@ interface, Apache (mod_perl) handlers</d
   <categoryname>server readonly</categoryname>
   <description>error warnings and icons</description>
 </directory>
+
 <directory dist='default'>
   <protectionlevel>never_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/lonUsers</targetdir>
@@ -895,6 +930,12 @@ are viewable over the world-wide web</de
 </directory>
 <directory dist='default'>
   <protectionlevel>modest_delete</protectionlevel>
+  <targetdir dist='default'>home/httpd/lonTabs/dns_checksums</targetdir>
+  <categoryname>server readonly</categoryname>
+  <description>Version numbers and checksums</description>
+</directory>
+<directory dist='default'>
+  <protectionlevel>modest_delete</protectionlevel>
   <targetdir dist='default'>home/httpd/html/adm/lonInterFace</targetdir>
   <categoryname>server readonly</categoryname>
   <description>Page headers and graphical interface files</description>
@@ -1001,7 +1042,7 @@ each list element consists of only two s
 <file>
 <source>loncom/loncapa.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/loncapa.conf</target>
 <categoryname>conf</categoryname>
 <description>
 <p>
@@ -1044,7 +1085,7 @@ MySQL database</td></tr>
 <file type="postaboutversion">
 <source>loncom/loncapa_apache.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_apache.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa_apache.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/loncapa_apache.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 The goal of this file is to implement all LON-CAPA specific
@@ -1062,9 +1103,22 @@ the www@localhost MySQL password, and br
 </description>
 </file>
 <file>
+<source>loncom/loncapa_apache_local.conf</source>
+<target dist='default'>etc/httpd/conf/loncapa_apache_local.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/loncapa_apache_local.conf</target>
+<categoryname>static conf</categoryname>
+<description>
+Documentation file describing how to add domain-specific Apache configuration
+files, e.g., (loncapa_apache_localmsu.conf).
+loncapa_apache_local.conf needs to exist if no domain-specific file has so far
+been created so that Apache 2.4 will start, given that loncapa_apache.conf has:
+Include conf/loncapa_apache_local*.conf
+</description>
+</file>
+<file>
 <source>loncom/startup.pl</source>
 <target dist='default'>etc/httpd/conf/startup.pl</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/startup.pl</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/startup.pl</target>
 <categoryname>static conf</categoryname>
 <description>
 This file provides initializations for perl handlers.  It adjusts what
@@ -1075,7 +1129,7 @@ well as causing the Apache module to be
 </file>
 <link>
 <linkto>etc/apache2</linkto>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>
 etc/apache2/conf
 </target>
 <categoryname>symbolic link</categoryname>
@@ -1086,7 +1140,7 @@ symbolic link to directory /etc/apache2
 <file>
 <source>loncom/rewrites/loncapa_rewrite_off.conf</source>
 <target dist='default'>etc/httpd/conf/loncapa_rewrite.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/loncapa_rewrite.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/loncapa_rewrite.conf</target>
 <categoryname>conf</categoryname>
 <description>
 Default rewrite file. 
@@ -1098,7 +1152,7 @@ by setting: RewriteEngine off
 <source>loncom/rewrites/loncapa_rewrite_on.conf</source>
 <target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_on.conf</target>
 <target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_on.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/rewrites/loncapa_rewrite_on.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/rewrites/loncapa_rewrite_on.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to enable rewriting of
@@ -1109,7 +1163,7 @@ external requests for http:// to https:/
 <source>loncom/rewrites/loncapa_rewrite_off.conf</source>
 <target dist='default'>etc/httpd/conf/rewrites/loncapa_rewrite_off.conf</target>
 <target dist='sles9'>etc/apache/rewrites/loncapa_rewrite_off.conf</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/rewrites/loncapa_rewrite_off.conf</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/rewrites/loncapa_rewrite_off.conf</target>
 <categoryname>static conf</categoryname>
 <description>
 File to copy to /etc/apache2/loncapa_rewrite.conf (SuSE/SLES/Debian/Ubuntu LTS) or to  /etc/httpd/conf/loncapa_rewrite.conf to disable rewriting of
@@ -1274,6 +1328,16 @@ utility cgi script to view software vers
 </description>
 </file>
 <file>
+<source>loncom/cgi/lonmodulecheck.pl</source>
+<target dist='default'>home/httpd/cgi-bin/lonmodulecheck.pl</target>
+<categoryname>script</categoryname>
+<description>
+utility cgi script to check for differences between currently 
+installed versions of LON-CAPA modules and those expected for the 
+LON-CAPA release installed on the server.
+</description>
+</file>
+<file>
 <source>loncom/cgi/ping.pl</source>
 <target dist='default'>home/httpd/cgi-bin/ping.pl</target>
 <categoryname>script</categoryname>
@@ -1472,6 +1536,8 @@ man1.jpg;
 man1.jpg.meta;
 numerical.problem;
 numerical.problem.meta;
+numMultiAnswerUnordered.problem;
+numMultiAnswerUnordered.problem.meta;
 numPrePro.problem;
 numPrePro.problem.meta;
 Plot.problem.meta;
@@ -1500,6 +1566,8 @@ SelectFromOptions-7ConceptGoups.problem;
 SelectFromOptions-7ConceptGoups.problem.meta;
 SelectFromOptions-8ConceptGoups.problem;
 SelectFromOptions-8ConceptGoups.problem.meta;
+SelectFromOptions-multilingual.problem;
+SelectFromOptions-multilingual.problem.meta;
 SelectFromOptions-Simple.problem;
 SelectFromOptions-Simple.problem.meta;
 SimpleStringResponse.problem.meta;
@@ -1535,6 +1603,15 @@ reaction_hint.problem.meta
 </fileglob>
 
 <file>
+  <source>loncom/interface/spellcheck.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/spellcheck.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+Ajax handler for the spellcheck Jquery plugin
+  </description>
+  <status>IN testing</status>
+</file>
+<file>
   <source>loncom/homework/insertlist.xml</source>
   <target dist='default'>home/httpd/lonTabs/insertlist.xml</target>
   <categoryname>static conf</categoryname>
@@ -1654,6 +1731,27 @@ List of all domains in the LON-CAPA netw
   </description>
 </file>
 
+<fileglob>
+<glob>*.tab</glob>
+<sourcedir>loncom/dns_checksums/</sourcedir>
+<targetdir dist='default'>
+home/httpd/lonTabs/dns_checksums/</targetdir>
+<categoryname>www static conf</categoryname>
+<description>
+Files containing version numbers and checksums for most LON-CAPA perl modules,
+perl scripts, cgi scripts, daemons, and a configuration file in each
+LON-CAPA release, starting with 2.10.1
+</description>
+<filenames>
+2.10.1.tab;
+2.11.0.RC1.tab;
+2.11.0.RC2.tab;
+2.11.0.RC3.tab;
+2.11.0.tab;
+2.11.1.tab;
+</filenames>
+</fileglob>
+
 <file>
   <source>loncom/loncaparevs.tab</source>
   <target dist='default'>home/httpd/lonTabs/loncaparevs.tab</target>
@@ -1674,6 +1772,17 @@ File holds paired data -- hostname:lonHo
 </file>
 
 <file>
+  <source>loncom/lonchksums.tab</source>
+  <target dist='default'>home/httpd/lonTabs/lonchksums.tab</target>
+  <categoryname>www conf</categoryname>
+  <description>
+File containing version numbers and checksums for most LON-CAPA perl modules,
+perl scripts, cgi scripts, daemons, and a configuration file for current
+server. Updated by loncron.
+  </description>
+</file>
+
+<file>
 <source>loncom/spare.tab</source>
 <target dist='default'>home/httpd/lonTabs/spare.tab</target>
 <categoryname>conf</categoryname>
@@ -1779,6 +1888,36 @@ file: nohist_courseids.db found in /home
 </description>
 </file>
 <file>
+<source>loncom/misc/checkforupdates.pl</source>
+<target dist='default'>home/httpd/perl/checkforupdates.pl</target>
+<categoryname>script</categoryname>
+<description>
+Perl script run by cron to check:
+(a) for differences between currently installed versions of LON-CAPA modules
+and those expected for the particular LON-CAPA release
+(b) if an updated LON-CAPA release is available from install.loncapa.org  
+</description>
+</file>
+<file>
+<source>loncom/misc/rebuild_lastlogin.pl</source>
+<target dist='default'>home/httpd/perl/debug/rebuild_lastlogin.pl</target>
+<categoryname>script</categoryname>
+<description>
+Perl script run as www to populate nohist_crslastlogin.db for course(s) on 
+a library server to record most recent "log-in" by each user in a course.
+
+This script is intended to be run after installation of LON-CAPA
+2.11.0 on a library server to populate nohist_crslastlogin.db files
+for the domain's courses. (Thereafter role selection after log-in
+on a server running 2.11.0 will update nohist_crslastlogin.db
+when a course role is selected.)
+
+This script might be run at other times. For example:
+(a) if course user sessions are being routinely hosted on pre-2.11.0 servers.
+(b) if nohist_crslastlogin.db is lost or corrupted, and needs to be rebuilt.
+</description>
+</file>
+<file>
 <source>loncom/debugging_tools/seed_accesscount.pl</source>
 <target dist='default'>home/httpd/perl/seed_accesscount.pl</target>
 <categoryname>script</categoryname>
@@ -1913,6 +2052,49 @@ routines in lonauthcgi.pm
 </description>
 </file>
 <file>
+<source>loncom/cgi/listcodes.pl</source>
+<target dist='default'>home/httpd/cgi-bin/listcodes.pl</target>
+<categoryname>script</categoryname>
+<description>CGI script to display courses with unique six character codes.
+For use on the primary library server for a domain. Access control uses
+routines in lonauthcgi.pm.  Display formats are: csv (default), html, xml.
+</description>
+</file>
+<file>
+<source>loncom/cgi/quotacheck.pl</source>
+<target dist='default'>home/httpd/cgi-bin/quotacheck.pl</target>
+<categoryname>script</categoryname>
+<description>CGI script to display disk usage and quota for content  
+uploaded directly to a course/community via the Course Editor.
+</description>
+</file>
+<file>
+<source>loncom/cgi/enrollqueued.pl</source>
+<target dist='default'>home/httpd/cgi-bin/enrollqueued.pl</target>
+<categoryname>script</categoryname>
+<description>CGI script to process a queued self-enrollment request
+and output a web address which should be provided as a link the 
+the student follows to access the course. Can support validation
+of self-enrollment requests on a third party system/server which
+handles payment etc.  
+</description>
+</file>
+<file>
+<source>loncom/cgi/createpending.pl</source>
+<target dist='default'>home/httpd/cgi-bin/createpending.pl</target>
+<categoryname>script</categoryname>
+<description>CGI script to process a pending course request
+for an unofficial course, textbook course, or community, and
+and output a web address which should be provided as a link the
+the requester follows to access the new course. If this course type
+has been configued to have a six character code associated with
+it, the will be output also, (e.g., for recording locally, and/or
+display to the requester). The script was implemented to support
+validation of course requests on a third party system/server which 
+handles payment etc.
+</description>
+</file>
+<file>
 <source>loncom/homework/templates/sampleexternal.pl</source>
 <target dist='default'>home/httpd/cgi-bin/sampleexternal.pl</target>
 <categoryname>script</categoryname>
@@ -2015,16 +2197,6 @@ Allows www to change user passwords.
 <status>being updated</status>
 </file>
 <file>
-<source>loncom/lcuseradd</source>
-<target dist='default'>home/httpd/perl/lcuseradd</target>
-<categoryname>setuid script</categoryname>
-<description>
-Coordinates the system services and files in order to allow lond to add a
-new user.
-</description>
-<status>being updated</status>
-</file>
-<file>
 <source>loncom/lciptables</source>
 <target dist='default'>home/httpd/perl/lciptables</target>
 <categoryname>setuid script</categoryname>
@@ -2324,6 +2496,15 @@ Handler to put up simple page
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonextresedit.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonextresedit.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Handler to edit external resource.
+</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/interface/lonpickcode.pm</source>
   <target dist='default'>home/httpd/lib/perl/Apache/lonpickcode.pm</target>
   <categoryname>handler</categoryname>
@@ -2726,11 +2907,17 @@ anno.gif;
 anot.gif;
 anot2.gif;
 authorRemote.gif;
+author_example_directory.gif;
+author_new_content.gif;
+author_top_menu.gif;
+back.gif;
 bchat.gif;
 blog.gif;
+bomb.gif;
 catalog.gif;
 ccat.gif;
 chat.gif;
+chkrole.gif;
 chrt.gif;
 com.gif;
 constructionSpace.gif;
@@ -2748,6 +2935,9 @@ dynamic_piecewise.gif;
 dynamic_piecewise2.gif;
 dynamic_plot.gif;
 dynamic_plot2.gif;
+edit.gif;
+editmap.gif;
+editwishlist.gif;
 edit-find-replace.gif;
 edit-redo.gif;
 edit-undo.gif;
@@ -2757,10 +2947,14 @@ extres.gif;
 fdbk.gif;
 feedback.gif;
 formulaResponse.gif;
+forw.gif;
 FPRexamples.gif;
 fromfile.gif;
 grds.gif;
 grps.gif;
+help.gif;
+html_page_plaintext.gif;
+html_page_richtext.gif;
 list-add.gif;
 login.gif;
 lonhelpheader.gif;
@@ -2783,10 +2977,12 @@ mapStraightened.gif;
 mapTwoResources.gif;
 messalog.gif;
 mngcu.gif;
+multiple_choice_problem_menu.gif;
 nav.gif;
 navigation.gif;
 network-workgroup.gif;
 new.gif;
+newmsg.gif;
 numericalResponse1.gif;
 numericalResponseEditor.gif;
 numericalResponseSlopeProblem.gif;
@@ -2801,6 +2997,9 @@ pref.gif;
 preferences-desktop-font.gif;
 preferences-desktop-locale.gif;
 preferences-desktop-theme.gif;
+problem_editing_colorful.gif;
+problem_editing_xml.gif;
+problem_testing.gif;
 prt.gif;
 publishMetadata.gif;
 radioResponse2.gif;
@@ -2827,11 +3026,30 @@ subtimpl.gif;
 survey_rep.gif;
 syllabus.gif;
 system-users.gif;
+tolastloc.gif;
 turning.gif;
 uploadscores.gif;
 uplusr.gif;
-vbkm.gif;
 verify.gif;
+webdavcentosauth.gif;
+webdavcentosdirectory.gif;
+webdavcentosmenu.gif;
+webdavcentosurl.gif;
+webdavforkliftdirectory.gif;
+webdavforkliftedit.gif;
+webdavforkliftmenu.gif;
+webdavforklifturl.gif;
+webdavmacauth.gif;
+webdavmacconnect.gif;
+webdavmacdirectory.gif;
+webdavmacedit.gif;
+webdavmacfinder.gif;
+webdavwin7auth.gif;
+webdavwin7directory.gif;
+webdavwin7map.gif;
+webdavwin7menu.gif;
+webdavwin7url.gif;
+webpage.gif;
 wishlist.gif;
 wishlist-link.gif;
 iclicker.gif;
@@ -2875,11 +3093,17 @@ anno.eps;
 anot.eps;
 anot2.eps;
 authorRemote.eps;
+author_example_directory.eps;
+author_new_content.eps;
+author_top_menu.eps;
+back.eps;
 bchat.eps;
 blog.eps;
+bomb.eps;
 catalog.eps;
 ccat.eps;
 chat.eps;
+chkrole.eps;
 chrt.eps;
 com.eps;
 constructionSpace.eps;
@@ -2897,6 +3121,9 @@ dynamic_piecewise.eps;
 dynamic_piecewise2.eps;
 dynamic_plot.eps;
 dynamic_plot2.eps;
+edit.eps;
+editmap.eps;
+editwishlist.eps;
 edit-find-replace.eps;
 edit-redo.eps;
 edit-undo.eps;
@@ -2906,10 +3133,14 @@ extres.eps;
 fdbk.eps;
 feedback.eps;
 formulaResponse.eps;
+forw.eps;
 FPRexamples.eps;
 fromfile.eps;
 grds.eps;
 grps.eps;
+help.eps;
+html_page_plaintext.eps;
+html_page_richtext.eps;
 list-add.eps;
 lonhelpheader.eps;
 login.eps;
@@ -2932,10 +3163,12 @@ mapStraightened.eps;
 mapTwoResources.eps;
 messalog.eps;
 mngcu.eps;
+multiple_choice_problem_menu.eps;
 nav.eps;
 navigation.eps;
 network-workgroup.eps;
 new.eps;
+newmsg.eps;
 numericalResponse1.eps;
 numericalResponseEditor.eps;
 numericalResponseSlopeProblem.eps;
@@ -2949,6 +3182,9 @@ port.eps;
 preferences-desktop-font.eps;
 preferences-desktop-locale.eps;
 preferences-desktop-theme.eps;
+problem_editing_colorful.eps;
+problem_editing_xml.eps;
+problem_testing.eps;
 prt.eps;
 publishMetadata.eps;
 radioResponse2.eps;
@@ -2975,11 +3211,30 @@ subtimpl.eps;
 survey_rep.eps;
 syllabus.eps;
 system-users.eps;
+tolastloc.eps;
 turning.eps;
 uploadscores.eps;
 uplusr.eps;
-vbkm.eps;
 verify.eps;
+webdavcentosauth.eps;
+webdavcentosdirectory.eps;
+webdavcentosmenu.eps;
+webdavcentosurl.eps;
+webdavforkliftdirectory.eps;
+webdavforkliftedit.eps;
+webdavforkliftmenu.eps;
+webdavforklifturl.eps;
+webdavmacauth.eps;
+webdavmacconnect.eps;
+webdavmacdirectory.eps;
+webdavmacedit.eps;
+webdavmacfinder.eps;
+webdavwin7auth.eps;
+webdavwin7directory.eps;
+webdavwin7map.eps;
+webdavwin7menu.eps;
+webdavwin7url.eps;
+webpage.eps;
 wishlist.eps;
 wishlist-link.eps;
 iclicker.eps;
@@ -3013,6 +3268,7 @@ Ambiguous_Reference.tex;
 Analysis_Analyze_Over.tex;
 Analyze_Problem.tex;
 Answer_Date.tex;
+Answer_Display_Overview.tex;
 Annotation.tex;
 Authentication.tex;
 Auth_Options.tex;
@@ -3038,7 +3294,9 @@ Authoring_ImageResponse.tex;
 Authoring_Input_Tags.tex;
 Authoring_Internal_Tags.tex;
 Authoring_Intro.tex;
+Authoring_Library_Scripts.tex;
 Authoring_Math_Editor.tex;
+Authoring_Multilingual_Problems.tex;
 Authoring_NumericalResponse.tex;
 Authoring_OptionResponse.tex;
 Authoring_Output_Tags.tex;
@@ -3051,9 +3309,16 @@ Authoring_Response_Tag_Intro.tex;
 Authoring_Scripting_Tags.tex;
 Authoring_Spreadsheet.tex;
 Authoring_Structure_Tags.tex;
+Authoring_Surveys.tex;
+Authoring_WebDAV.tex;
+Authoring_WebDAV_Mac_10v6.tex;
+Authoring_WebDAV_Mac_10v10.tex;
+Authoring_WebDAV_Windows_v7.tex;
+Authoring_WebDAV_Linux_Centos.tex;
 Authoring_XML_Intro.tex;
 Author_LON-CAPA_Introduction.tex;
 Author_Manual_Title_Page.tex;
+Author_Menu.tex;
 Author_Numerical_and_Formula.tex;
 Author_Remote_Control.tex;
 Batch_Creation.tex;
@@ -3098,6 +3363,7 @@ Chatting.tex;
 Clicker_Registration.tex;
 Coauthor.tex;
 Construction_Space_Overview.tex;
+Content_Page_Overview.tex;
 Contextual_Help.tex;
 Course_Add_Other.tex;
 Course_Add_Student.tex;
@@ -3109,6 +3375,7 @@ Course_Chat.tex;
 Course_Convert_To_CSV.tex;
 Course_Coordination_Intro.tex;
 Course_Create_Class_List.tex;
+Course_Creation_Log.tex;
 Course_Critical_Message.tex;
 Course_Deleting.tex;
 Course_Disable_Discussion.tex;
@@ -3140,6 +3407,7 @@ Course_Prefs_Spreadsheet.tex;
 Course_Prefs_Discussions.tex;
 Course_Prefs_General.tex;
 Course_Prefs_Other.tex;
+Course_Prefs_Settings.tex;
 Course_Problem_Weight.tex;
 Course_Requests.tex;
 Course_Request_Access_End.tex;
@@ -3170,11 +3438,15 @@ Course_User_Parameter.tex;
 Course_View_Class_List.tex;
 Create_Course.tex;
 Creating_A_Course_Intro.tex;
+Creating_Content_Overview.tex;
 Creating_Domain_Coordinators.tex;
+Creating_Formula_Response.tex;
 Creating_Groups.tex;
+Creating_Math_Response_Problems.tex;
 Creating_New_Content_Pages.tex;
 Creating_Online_Problems.tex;
 Creating_Radio_Response_Problems.tex;
+Custom_Response_Problem_Creation.tex;
 Custom_Response_Problems.tex;
 Deleting_Domain_Coordinators.tex;
 Developer_Manual_Title_Page.tex;
@@ -3193,14 +3465,19 @@ Docs_Adding_Syllabus.tex;
 Docs_Alternatives.tex;
 Docs_Check_Resource_Versions.tex;
 Docs_Creating_From_Template.tex;
+Docs_Course_Roster.tex;
+Docs_Dropbox.tex;
 Docs_Dump_Course_Docs.tex;
 Docs_Export_Course_Docs.tex;
 Docs_Editing_Templated_Pages.tex;
 Docs_Essay.tex;
+Docs_Import_Stored_Link.tex;
+Docs_Importing_IMS_Course.tex;
 Docs_Importing_LON-CAPA_Resource.tex;
 Docs_Load_Map.tex;
 Docs_Main_Course_Documents.tex;
 Docs_Navigate_Content.tex;
+Docs_Numerical_Response.tex;
 Docs_Option_Response.tex;
 Docs_Overview.tex;
 Docs_Radio.tex;
@@ -3211,6 +3488,7 @@ Docs_String_Response.tex;
 Docs_Supplemental.tex;
 Docs_Uploading_From_Harddrive.tex;
 Docs_Verify_Content.tex;
+Docs_Web_Page.tex;
 Domain_Configuration_Auto_Creation.tex;
 Domain_Configuration_Auto_Enrollment.tex;
 Domain_Configuration_Auto_Updates.tex;
@@ -3218,12 +3496,17 @@ Domain_Configuration_Cataloging_Courses.
 Domain_Configuration_Color_Schemes.tex;
 Domain_Configuration_Contact_Info.tex;
 Domain_Configuration_Course_Defaults.tex;
+Domain_Configuration_Help_Settings.tex;
 Domain_Configuration_InstDirectory_Search.tex;
 Domain_Configuration_LangTZAuth.tex;
+Domain_Configuration_Load_Balancing.tex;
 Domain_Configuration_Login_Page.tex;
 Domain_Configuration_Quotas.tex;
+Domain_Configuration_Request_Author.tex;
 Domain_Configuration_Request_Courses.tex;
 Domain_Configuration_Scantron_Format.tex;
+Domain_Configuration_Self_Creation.tex;
+Domain_Configuration_Selfenrollment.tex;
 Domain_Configuration_Server_Status.tex;
 Domain_Configuration_SSL.tex;
 Domain_Configuration_User_Creation.tex;
@@ -3234,6 +3517,7 @@ Domain_Coordination_Overview.tex;
 Domain_Crontab_Entries.tex;
 Domain_Manual_Title_Page.tex;
 Due_Date.tex;
+Dynamic_Plot_Overview.tex;
 Edit_Syllabus.tex;
 Error.tex;
 exam_answers.tex;
@@ -3253,6 +3537,7 @@ Feedback_Discussion.tex;
 Feedback_Policy.tex;
 Finding_Resources.tex;
 Foils.tex;
+ForceIDChange.tex;
 Formula_Answers.tex;
 Formula_Editor.tex;
 Formula_Response_Adv_Intro.tex;
@@ -3261,6 +3546,7 @@ Formula_Response_Limitations.tex;
 Formula_Response_Problems.tex;
 Formula_Response_Sampling.tex;
 Formula_Tolerance.tex;
+Function_Plot_Response_Overview.tex;
 Function_Plot_Response_Background_Plot.tex;
 Function_Plot_Response_Evaluation_Rule.tex;
 Function_Plot_Response_Rule_Set.tex;
@@ -3295,10 +3581,12 @@ Help.tex;
 Helper_Course_Initialization.tex;
 How_To_Edit_Existing_Content_Pages.tex;
 Institutional_Integration_Authentication.tex;
+Institutional_Integration_CAS.tex;
 Institutional_Integration_Course_Codes.tex;
 Institutional_Integration_Course_Requests.tex;
 Institutional_Integration_Format_Checks.tex;
 Institutional_Integration_Identity_Management.tex;
+Institutional_Integration_Shibboleth.tex;
 Institutional_Integration_User_Categories.tex;
 Latex_Footer.tex;
 Latex_Header.tex;
@@ -3456,7 +3744,6 @@ Table_Mode.tex;
 Testbank_Formatting.tex;
 TEXDropEmptyColumns_attribute.tex;
 TEXitemgroupwidth_attribute.tex;
-TEXitemgroup_attribute.tex;
 TEXlayout_attribute.tex;
 TEXsize_attribute.tex;
 TEXtype_attribute.tex;
@@ -3478,6 +3765,7 @@ View_recent_activity.tex;
 What_Is_LON-CAPA.tex;
 Why_LON-CAPA.tex;
 Wishlist.tex;
+Wrong_Num_Boxes_Checked.tex;
 </filenames>
 </fileglob>
 <fileglob>
@@ -3493,12 +3781,21 @@ German Tex files for the help system
 About_Bombs.tex;
 About_Communication.tex;
 Auth_Options.tex;
+Authoring_ExternalResponse.tex;
 Authoring_Math_Editor.tex;
-Contextual_Help.tex;
+Authoring_Multilingual_Problems.tex;
+Caching.tex;
 Cascading_Parameters.tex;
+Change_Colors.tex;
+Change_Discussion_Display.tex;
+Change_Password.tex;
+Contextual_Help.tex;
+Course_Change_Privileges.tex;
 Course_Convert_To_CSV.tex;
 Course_Create_Class_List.tex;
+Course_Critical_Message.tex;
 Course_Self_Enrollment.tex;
+Creating_Math_Response_Problems.tex;
 Docs_About_Bulletin_Board.tex;
 Docs_About_Group_Files.tex;
 Docs_About_My_Personal_Info.tex;
@@ -3507,15 +3804,42 @@ Docs_About_Syllabus.tex;
 Docs_Adding_Course_Doc.tex;
 Docs_Adding_Folders.tex;
 Docs_Editing_Templated_Pages.tex;
+Docs_Import_Stored_Link.tex;
 Docs_Navigate_Content.tex;
 Docs_Score_Upload_Form.tex;
 Docs_Verify_Content.tex;
+ForceIDChange.tex;
+Formula_Answers.tex;
 Formula_Editor.tex;
 General_Intro.tex;
 Generation.tex;
 Metadata_Description.tex;
 Navigation_Screen.tex;
 Parameter_Overview.tex;
+Parameter_Set_Folder.tex;
+Physical_Units.tex;
+Portfolio_About.tex;
+Portfolio_AddFiles.tex;
+Portfolio_Catalog.tex;
+Portfolio_ChangeDirectory.tex;
+Portfolio_CreateDirectory.tex;
+Portfolio_DeleteFile.tex;
+Portfolio_FileAction.tex;
+Portfolio_FileList.tex;
+Portfolio_OpenFile.tex;
+Portfolio_RenameFile.tex;
+Portfolio_ShareFile.tex;
+Portfolio_ShareFile_ChangeSetting.tex;
+Portfolio_ShareFile_Conditional.tex;
+Portfolio_ShareFile_SetAccess.tex;
+Portfolio_ShareFile_StopAccess.tex;
+Prefs_About_Me.tex;
+Prefs_Forwarding.tex;
+Prefs_Language.tex;
+Prefs_Messages.tex;
+Prefs_Notification.tex;
+Prefs_Screen_Name_Nickname.tex;
+Problem_Editor_XML_Index.tex;
 Problem_Parameters.tex;
 Publishing_Copyright.tex;
 Publishing_Keywords.tex;
@@ -3524,12 +3848,16 @@ Ranking_Problems.tex;
 Receipt.tex;
 Search_Advanced.tex;
 Search_Basic.tex;
+Sending_Email.tex;
+Some_Items_Were_Not_Submitted.tex;
 Student_Intro.tex;
 Syllabus_ExtLink.tex;
 Table_Mode.tex;
 Tries.tex;
 Uploaded_Templates_PublicView.tex;
 Uploaded_Templates_TextBoxes.tex;
+View_recent_activity.tex;
+Wishlist.tex;
 </filenames>
 </fileglob>
 <fileglob>
@@ -3590,6 +3918,19 @@ status.txt;
 unicover.txt;
   </filenames>
 </fileglob>
+
+<fileglob>
+    <glob>*.js</glob>
+    <sourcedir>loncom/html/adm/quicksearch/</sourcedir>
+    <targetdir dist='default'>home/httpd/html/adm/quicksearch/</targetdir>
+    <description>
+Search to enable the quicksearch function in the author space
+    </description>
+    <filenames>
+quicksearch.js
+    </filenames>
+</fileglob>
+
 <file>
 <source>loncom/html/adm/fonts/AUTHORS</source>
 <target dist='default'>home/httpd/html/adm/fonts/AUTHORS</target>
@@ -4138,6 +4479,7 @@ home/httpd/lib/perl/Apache/localize/</ta
 Translation files.
 </description>
 <filenames>
+en.pm;
 de.pm;
 pt.pm;
 fr.pm;
@@ -4147,6 +4489,7 @@ ru.pm;
 fa.pm;
 ar.pm;
 es.pm;
+he.pm;
 x_chef.pm;
 zh.pm;
 </filenames>
@@ -4249,6 +4592,25 @@ assignment.
   <status>works/unverified</status>
 </file>
 
+<file>
+  <source>loncom/html/adm/jsme/JSME_2015-02-09.zip</source>
+  <target dist='default'>home/httpd/html/adm/jsme</target>
+  <categoryname>script</categoryname>
+  <description>
+   JSME files (Javascript version of JME) for editing organic structures
+   NOTE: the commands file `mv`'s the files out of the original location provided
+   unzipping the file, making it look cleaner in the /home/.../adm/ directory
+  </description>
+  <installscript>
+commands
+  </installscript>
+  <dependencies>
+loncom/html/adm/jsme/commands;
+loncom/html/adm/jsme/VERSION;
+loncom/html/adm/jsme/JSME_2015-02-09.zip;
+  </dependencies>
+</file>
+
 <fileglob>
   <glob>*.*</glob>
   <sourcedir>loncom/html/adm/jme/</sourcedir>
@@ -4291,8 +4653,6 @@ geogebra_export.jar;
 geogebra_gui.jar.pack.gz;
 geogebra_main.jar;
 geogebra_properties.jar.pack.gz;
-geogebra_usb.jar;
-geogebra_usb.jar.pack.gz;
 jlatexmath.jar;
 jlatexmath.jar.pack.gz;
 jlm_cyrillic.jar;
@@ -4302,38 +4662,25 @@ jlm_greek.jar.pack.gz;
   </filenames>
 </fileglob>
 
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/jmol/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/jmol/</targetdir>
-  <categoryname>interface file</categoryname>
+<file>
+  <source>loncom/html/adm/jmol/jmol-loncapa.zip</source>
+  <target dist='default'>home/httpd/html/adm/jmol</target>
+  <categoryname>script</categoryname>
   <description>
-    Jmol files, for displaying structures
+   Jmol for displaying structures, scripted installation that unzips installation file
+   in the appropriate location
+   NOTE: the commands file `mv`'s the files out of the original location provided
+   unzipping the file, making it look cleaner in the /home/.../adm/ directory
   </description>
-  <filenames>
-COPYRIGHT.txt;
-JmolApplet.jar;
-Jmol.js;
-LICENSE.txt;
-README.txt;
-JmolApplet0_Core.jar;
-JmolApplet0_i18n.jar;
-JmolApplet0.jar;
-JmolApplet0_Jars.jar;
-JmolApplet0_Jvxl.jar;
-JmolApplet0_Main.jar;
-JmolApplet0_Popup.jar;
-JmolApplet0_Quantum.jar;
-JmolApplet0_ReadersCifPdb.jar;
-JmolApplet0_ReadersMolXyz.jar;
-JmolApplet0_ReadersMore.jar;
-JmolApplet0_ReadersXml.jar;
-JmolApplet0_ShapeBio.jar;
-JmolApplet0_ShapeSpecial.jar;
-JmolApplet0_Smiles.jar;
-JmolApplet0_Viewer.jar;
-  </filenames>
-</fileglob>
+  <installscript>
+commands
+  </installscript>
+  <dependencies>
+loncom/html/adm/jmol/commands;
+loncom/html/adm/jmol/VERSION;
+loncom/html/adm/jmol/jmol-loncapa.zip;
+  </dependencies>
+</file>
 
 <file>
   <source>loncom/homework/convertjme.pl</source>
@@ -4343,105 +4690,57 @@ JmolApplet0_Viewer.jar;
     Dynamically converts JME strings into either a png or ps file.
   </description>
 </file>
+
 <fileglob>
   <glob>*.*</glob>
   <sourcedir>loncom/html/adm/dragmath/applet/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/</targetdir>
+  <targetdir dist='default'>home/httpd/html/adm/dragmath/</targetdir>
   <categoryname>interface file</categoryname>
   <description>
 Dragmath is a Java-based formula editor
   </description>
   <filenames>
-Latex.html;
-MathML.html;
-Maxima.html;
 MaximaPopup.html;
 EditMathPopup.html;
 FCKEditMathPopup.html
   </filenames>
 </fileglob>
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/dragmath/applet/classes/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/</targetdir>
-  <categoryname>interface file</categoryname>
-  <description>
-Dragmath is a Java-based formula editor
-  </description>
-  <filenames>
-AbsoluteLayout.jar;
-jep.jar;
-Project.jar;
-Config.xml;
-jdom.jar;
-swing-layout-1.0.jar;
-  </filenames>
-</fileglob>
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/dragmath/applet/HotEqn/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/HotEqn/</targetdir>
-  <categoryname>interface file</categoryname>
-  <description>
-Dragmath is a Java-based formula editor
-  </description>
-  <filenames>
-HotEqn.class;
-HotEqn.jar;
-  </filenames>
-</fileglob>
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/dragmath/applet/classes/Display/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/Display/</targetdir>
-  <categoryname>interface file</categoryname>
+
+<file>
+  <source>loncom/html/adm/dragmath/dragmath-0.7.9.zip</source>
+  <target dist='default'>home/httpd/html/adm/dragmath</target>
+  <categoryname>script</categoryname>
   <description>
-Dragmath is a Java-based formula editor
+   dragmath formula editor, scripted installation unzips installation file
+   in the appropriate location
   </description>
-  <filenames>
-MainApplet.class;
-  </filenames>
-</fileglob>
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/dragmath/applet/classes/formats/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/formats/</targetdir>
+  <installscript>
+commands
+  </installscript>
+  <dependencies>
+loncom/html/adm/dragmath/commands;
+loncom/html/adm/dragmath/dragmath-0.7.9.zip;
+  </dependencies>
+</file>
+
+<file>
+  <source>loncom/html/adm/LC_math_editor/dist/LC_math_editor.min.js</source>
+  <target dist='default'>home/httpd/html/adm/LC_math_editor/LC_math_editor.min.js</target>
   <categoryname>interface file</categoryname>
   <description>
-Dragmath is a Java-based formula editor
+LON-CAPA math editor
   </description>
-  <filenames>
-ASCIIMathML.xml;
-Latex.xml;
-MathML.xml;
-MoodleTex.xml;
-Maple.xml;
-Maxima.xml;
-  </filenames>
-</fileglob>
-<fileglob>
-  <glob>*.*</glob>
-  <sourcedir>loncom/html/adm/dragmath/applet/classes/lang/</sourcedir>
-  <targetdir dist='default'>home/httpd/html/adm/dragmath/applet/classes/lang/</targetdir>
+</file>
+
+<file>
+  <source>loncom/javascriptlib/file_upload.js</source>
+  <target dist='default'>home/httpd/html/res/adm/includes/file_upload.js</target>
   <categoryname>interface file</categoryname>
   <description>
-Dragmath is a Java-based formula editor
+    JavaScript dealing with file uploads
   </description>
-  <filenames>
-ca.xml;
-cz.xml;
-en.xml;
-fr.xml;
-no.xml;
-pt-br.xml;
-sv.xml;
-de.xml;
-es.xml;
-nl.xml;
-pl.xml;
-ru.xml;
-  </filenames>
-</fileglob>
+</file>
+
 <fileglob>
   <glob>*.*</glob>
   <sourcedir>loncom/html/adm/jsMath/</sourcedir>
@@ -4454,6 +4753,7 @@ jsMath is a Javascript solution to conve
 black.gif;
 blank.gif;
 COPYING.txt;
+FONTSVERSION;
 jsMath-BaKoMa-fonts.js;
 jsMath-autoload.html;
 jsMath-controls.html;
@@ -4482,7 +4782,7 @@ jsMath-old-browsers.js;
     Server side png fonts for use by jsMath
   </description>
   <installscript>
-commands /home/httpd/html/adm
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/jsMath/commands;
@@ -4491,7 +4791,7 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
 </file>
 
 <file>
-  <source>loncom/html/adm/MathJax/mathjax-MathJax-v1.1a-0-g1697387.zip</source>
+  <source>loncom/html/adm/MathJax/mathjax-MathJax-v2.3-9-g78ea6af.zip</source>
   <target dist='default'>home/httpd/html/adm/MathJax</target>
   <categoryname>script</categoryname>
   <description>
@@ -4501,30 +4801,109 @@ loncom/html/adm/jsMath/jsMath-fonts-1.3.
    unzipping the file, making it look cleaner in the /home/.../adm/ directory
   </description>
   <installscript>
-commands /home/httpd/html/adm/MathJax
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/MathJax/commands;
 loncom/html/adm/MathJax/VERSION;
-loncom/html/adm/MathJax/mathjax-MathJax-v1.1a-0-g1697387.zip;
+loncom/html/adm/MathJax/mathjax-MathJax-v2.3-9-g78ea6af.zip;
   </dependencies>
 </file>
 
 <file>
-  <source>loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz</source>
-  <target dist='default'>home/httpd/html/adm/ckeditor</target>
+  <source>loncom/html/adm/geogebra/geogebraweb_5.0.tar.gz</source>
+  <target dist='default'>home/httpd/html/adm/geogebra/web</target>
+  <categoryname>script</categoryname>
+  <description>
+   HTML5/JavaScript Version of GeoGebra
+  </description>
+  <installscript>
+commands
+  </installscript>
+  <dependencies>
+loncom/html/adm/geogebra/commands;
+loncom/html/adm/geogebra/VERSION;
+loncom/html/adm/geogebra/geogebraweb_5.0.tar.gz;
+  </dependencies>
+</file>
+
+<file>
+  <source>loncom/html/adm/ckeditor/ckeditor_4.4.7.tar.gz</source>
+  <target dist='default'>home/httpd/html/ckeditor</target>
   <categoryname>script</categoryname>
   <description>
    GUI HTML Editor, scripted installation decompress the tarball and
    installs the loncapa config.js file
   </description>
   <installscript>
-commands /home/httpd/html/
+commands
   </installscript>
   <dependencies>
 loncom/html/adm/ckeditor/commands;
-loncom/html/adm/ckeditor/ckeditor_3.6.2.tar.gz;
+loncom/html/adm/ckeditor/ckeditor_4.4.7.tar.gz;
 loncom/html/adm/ckeditor/loncapaconfig.js;
+loncom/html/adm/ckeditor/VERSION;
+loncom/html/adm/ckeditor/plugins/lcm/plugin.js;
+loncom/html/adm/ckeditor/plugins/lcm/dialogs/lcm.js;
+loncom/html/adm/ckeditor/plugins/lcm/icons/lcm.png;
+loncom/html/adm/ckeditor/plugins/lcm/icons/hidpi/lcm.png;
+loncom/html/adm/ckeditor/plugins/lcm/images/loader.gif;
+loncom/html/adm/ckeditor/plugins/lcm/lang/af.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ar.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ca.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/cs.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/cy.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/da.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/de.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/el.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/en-gb.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/en.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/eo.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/es.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/fa.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/fi.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/fr.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/gl.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/he.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/hr.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/hu.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/it.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ja.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/km.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ku.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/lt.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/nb.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/nl.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/no.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/pl.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/pt-br.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/pt.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ro.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/ru.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/sk.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/sl.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/sq.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/sv.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/tr.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/tt.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/uk.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/vi.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/zh-cn.js;
+loncom/html/adm/ckeditor/plugins/lcm/lang/zh.js;
+loncom/html/adm/ckeditor/plugins/chem/plugin.js;
+loncom/html/adm/ckeditor/plugins/chem/dialogs/chem.js;
+loncom/html/adm/ckeditor/plugins/chem/icons/chem.png;
+loncom/html/adm/ckeditor/plugins/chem/icons/hidpi/chem.png;
+loncom/html/adm/ckeditor/plugins/chem/lang/de.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/en.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/es.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/fr.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/ja.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/pt-br.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/pt.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/ru.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/zh-cn.js;
+loncom/html/adm/ckeditor/plugins/chem/lang/zh.js;
   </dependencies>
 </file>
 
@@ -4655,8 +5034,10 @@ JQuery countdown timer javascript files
     jquery.countdown-ar.js;
     jquery.countdown-bg.js;
     jquery.countdown-bn.js;
+    jquery.countdown-bs.js;
     jquery.countdown-ca.js;
     jquery.countdown-cs.js;
+    jquery.countdown-cy.js;
     jquery.countdown-da.js;
     jquery.countdown-de.js;
     jquery.countdown-el.js;
@@ -4666,34 +5047,39 @@ JQuery countdown timer javascript files
     jquery.countdown-fi.js;
     jquery.countdown-fr.js;
     jquery.countdown-gl.js;
+    jquery.countdown-gu.js;
     jquery.countdown-he.js;
     jquery.countdown-hr.js;
     jquery.countdown-hu.js;
+    jquery.countdown-hy.js;
     jquery.countdown-id.js;
     jquery.countdown-it.js;
     jquery.countdown-ja.js;
     jquery.countdown.js;
+    jquery.countdown-kn.js;
     jquery.countdown-ko.js;
     jquery.countdown-lt.js;
     jquery.countdown-lv.js;
     jquery.countdown.min.js;
+    jquery.countdown-ml.js;
     jquery.countdown-ms.js;
     jquery.countdown-my.js;
     jquery.countdown-nb.js;
     jquery.countdown-nl.js;
-    jquery.countdown.pack.js;
     jquery.countdown-pl.js;
     jquery.countdown-pt-BR.js;
     jquery.countdown-ro.js;
     jquery.countdown-ru.js;
     jquery.countdown-sk.js;
     jquery.countdown-sl.js;
+    jquery.countdown-sq.js;
     jquery.countdown-sr.js;
     jquery.countdown-sr-SR.js;
     jquery.countdown-sv.js;
     jquery.countdown-th.js;
     jquery.countdown-tr.js;
     jquery.countdown-uk.js;
+    jquery.countdown-uz.js;
     jquery.countdown-vi.js;
     jquery.countdown-zh-CN.js;
     jquery.countdown-zh-TW.js;
@@ -4708,7 +5094,7 @@ JQuery countdown timer javascript files
 JQuery countdown timer CSS files
   </description>
   <filenames>
-    jquery.countdown.css
+    jquery.countdown.css;
   </filenames>
 </fileglob>
 <fileglob>
@@ -4720,7 +5106,7 @@ JQuery countdown timer CSS files
 JQuery countdown timer Image file for Glowing countdown
   </description>
   <filenames>
-    countdownGlowing.gif
+    countdownGlowing.gif;
   </filenames>
 </fileglob>
 <fileglob>
@@ -4732,10 +5118,69 @@ JQuery countdown timer Image file for Gl
 JQuery countdown timer Image file for LED style countdown
   </description>
   <filenames>
-    countdownLED.png
+    countdownLED.png;
   </filenames>
 </fileglob>
+<fileglob>
+    <glob>*.*</glob>
+    <sourcedir>loncom/html/adm/jQuery/addons/</sourcedir>
+    <targetdir>home/httpd/html/adm/jQuery/addons/</targetdir>
+    <categoryname>script</categoryname>
+    <description>
+Addons for jQuery
+    </description>
+</fileglob>
+<!-- JQuery spellchecker plugin -->
 
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/spellcheck/js/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/js/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    jquery.spellchecker.min.js;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.css</glob>
+  <sourcedir>loncom/html/adm/spellcheck/css/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/css/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker.css;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/spellcheck/img/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/img/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker_shadow.png;
+    spellcheck.png;
+  </filenames>
+</fileglob>
+<fileglob>
+  <glob>*.gif</glob>
+  <sourcedir>loncom/html/adm/spellcheck/img/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/spellchecker/img/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+    JQuery spellchecker plugin
+  </description>
+  <filenames>
+    spellchecker_bg.gif;
+  </filenames>
+</fileglob>
 
 
 <fileglob>
@@ -4790,6 +5235,34 @@ jQuery custom distribution of version 1.
   </filenames>
 </fileglob>
 
+<!-- JQuery nicescroll plugin -->
+
+<fileglob>
+  <glob>*.js</glob>
+  <sourcedir>loncom/html/adm/nicescroll/js/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/nicescroll/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+jQuery nicescroll plugin javascript
+  </description>
+  <filenames>
+  jquery.nicescroll.min.js;
+  </filenames>
+</fileglob>
+
+<fileglob>
+  <glob>*.png</glob>
+  <sourcedir>loncom/html/adm/nicescroll/images/</sourcedir>
+  <targetdir dist='default'>home/httpd/html/adm/nicescroll/</targetdir>
+  <categoryname>interface file</categoryname>
+  <description>
+jQuery nicescroll plugin image
+  </description>
+  <filenames>
+  zoomico.png;
+  </filenames>
+</fileglob>
+
 <file>
 <source>loncom/interface/lontest.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lontest.pm</target>
@@ -4901,7 +5374,7 @@ echo 'pod2html lonnavmaps.pm'
 <file>
 <source>loncom/interface/lonselstudent.pm</source>
 <target dist='default'>home/httpd/lib/perl/Apache/lonselstudent.pm</target>
-<categoryname>standard</categoryname>
+<categoryname>handler</categoryname>
 <description>
 re-usable student selection subs.
 </description>
@@ -5687,6 +6160,177 @@ handles request to the CAPA homework pro
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/homework/loncapamath.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/loncapamath.pm</target>
+  <categoryname>handler</categoryname>
+  <description>
+    lm element implementation, using the math parser package
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/units.json</source>
+  <target dist='default'>home/httpd/lonTabs/units.json</target>
+  <categoryname>static conf</categoryname>
+  <description>
+    Math parser: units
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/constants.json</source>
+  <target dist='default'>home/httpd/lonTabs/constants.json</target>
+  <categoryname>static conf</categoryname>
+  <description>
+    Math parser: constants
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/CalcEnv.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/CalcEnv.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Calculation environment
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/CalcException.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/CalcException.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Calculation exception
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Definitions.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Definitions.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Operator definitions
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/ENode.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/ENode.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Parsed tree node.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Operator.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Operator.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Parser operator
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/ParseException.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/ParseException.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Parse exception
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Parser.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Parser.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Equation parser
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/QInterval.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/QInterval.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: An interval of quantities
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/QIntervalUnion.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/QIntervalUnion.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A union of possibly disjoint intervals
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/QMatrix.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/QMatrix.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A matrix of quantities
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/QSet.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/QSet.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A set of quantities
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Quantity.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Quantity.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A quantity (value and units)
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/QVector.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/QVector.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A vector of quantities
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Token.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Token.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: A parser token.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Tokenizer.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Tokenizer.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: String tokenizer
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
+  <source>loncom/homework/math_parser/Units.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/math_parser/Units.pm</target>
+  <categoryname>system file</categoryname>
+  <description>
+    Math parser: Loads and converts units
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
 <source>loncom/xml/Safe.pm</source>
 <target dist='default'>home/httpd/lib/perl/Safe.pm</target>
 <categoryname>handler</categoryname>
@@ -6018,6 +6662,14 @@ by the URL-related pattern syntax:
   <status>works/unverified</status>
 </file>
 <file>
+  <source>loncom/auth/lonnoshib.pm</source>
+  <target dist='default'>home/httpd/lib/perl/Apache/lonnoshib.pm</target>
+  <categoryname>handler</categoryname>
+  <description>Content handler for /adm/sso when Shibboleth auth is inactive.
+  </description>
+  <status>works/unverified</status>
+</file>
+<file>
   <source>loncom/html/adm/sso</source>
   <target dist='default'>home/httpd/html/adm/sso</target>
   <categoryname>interface file</categoryname>
@@ -6216,7 +6868,7 @@ Domain information serving.
 <file>
 <source>loncom/mime.types</source>
 <target dist='default'>etc/httpd/conf/mime.types</target>
-<target dist='sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/apache2/mime.types</target>
+<target dist='sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/apache2/mime.types</target>
 <categoryname>www static conf</categoryname>
 <description>Expanded mime.types</description>
 </file>
@@ -6286,22 +6938,6 @@ javascript for horizontal menubar in RAT
 </description>
 </file>
 <file>
-<source>rat/client/extpickcode.html</source>
-<target dist='default'>home/httpd/html/adm/rat/extpickcode.html</target>
-<categoryname>interface file</categoryname>
-<description>
-javascript
-</description>
-</file>
-<file>
-<source>rat/client/extpickframe.html</source>
-<target dist='default'>home/httpd/html/adm/rat/extpickframe.html</target>
-<categoryname>interface file</categoryname>
-<description>
-javascript
-</description>
-</file>
-<file>
 <source>rat/client/map.html</source>
 <target dist='default'>home/httpd/html/adm/rat/map.html</target>
 <categoryname>interface file</categoryname>
@@ -6750,6 +7386,16 @@ tested
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/xml/LCMathComplex.pm</source>
+<target dist='default'>home/httpd/lib/perl/LONCAPA/LCMathComplex.pm</target>
+<categoryname>conf</categoryname>
+<description>
+Modified version of Math::Complex 1.55 for use in Safe Space which eliminates
+dependency on Config.pm (not usable in Safe Space).
+</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/lonlocal.pm</source>
   <target dist='default'>home/httpd/lib/perl/LONCAPA/lonlocal.pm</target>
   <categoryname>system file</categoryname>
@@ -6854,6 +7500,16 @@ for socket-based communication between L
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/configuration/Checksumming.pm</source>
+<target dist='default'>home/httpd/lib/perl/LONCAPA/Checksumming.pm</target>
+<categoryname>system file</categoryname>
+<description>
+Provides routine to checksum perl modules, perl scripts, cgi scripts,
+language lexicons, and static configuration file on current server
+</description>
+<status>works/unverified</status>
+</file>
+<file>
 <source>loncom/ConfigFileEdit.pm</source>
 <target dist='default'>home/httpd/lib/perl/LONCAPA/ConfigFileEdit.pm</target>
 <categoryname>system file</categoryname>
@@ -6889,8 +7545,15 @@ compiles/tth.so.i386.perl.5.12;
 compiles/tth.so.x86_64.perl.5.12;
 compiles/tth.so.i386.perl.5.14;
 compiles/tth.so.x86_64.perl.5.14;
+compiles/tth.so.i386.perl.5.16;
+compiles/tth.so.x86_64.perl.5.16;
+compiles/tth.so.i386.perl.5.18;
+compiles/tth.so.x86_64.perl.5.18;
+compiles/tth.so.i386.perl.5.20;
+compiles/tth.so.x86_64.perl.5.20;
+compiles/tth.so.x86_64.sles12;
 compiles/tth.so.i386.debian5;
-compiles/tth.so.x86_64.debian5
+compiles/tth.so.x86_64.debian5;
 </dependencies>
 </file>
 <file>
@@ -7320,6 +7983,7 @@ nothumb.gif;
 open-all-folders.gif;
 open-first-problem.gif;
 qempty.gif;
+refresh.gif;
 show-all.gif;
 show-incomplete-problems.gif;
 star.gif;
@@ -7351,7 +8015,6 @@ pgrd.png;
 pref.png;
 roles.png;
 sprs.png;
-vbkm.png;
 anot.png;
 anot2.png;
 blog.png;
@@ -7368,7 +8031,6 @@ port.png;
 prt.png;
 rcrs.png;
 rsrv.png;
-sbkm.png;
 src.png;
 srvr.png;
 subm.png;
@@ -7378,6 +8040,7 @@ thumbsup_novote.png;
 thumbsdown.png;
 thumbsdown_gray.png;
 thumbsdown_novote.png;
+webpage.png;
 back.png;
 catalog.png;
 com.png;
@@ -7405,6 +8068,7 @@ reload.png;
 self_enroll.png;
 survey_rep.png;
 subdocs.png;
+tolastloc.png;
 uplusr.png;
 </filenames>
 </fileglob>
@@ -7420,12 +8084,15 @@ addClickerInfoFile.png;
 anonsurveythreshold.png;
 bubblesheet.png;
 ccatconf.png;
+ccat-22x22.png;
 chat.png;
 comblock.png;
 contact-new.png;
+contact-new-22x22.png;
 coprplot.png;
 crsnew.png;
 dialog-information.png;
+docs-22x22.png;
 document-open.png;
 document-properties.png;
 download_sub.png;
@@ -7436,8 +8103,10 @@ edit-find-replace.png;
 edit-find.png;
 edit-mode-22x22.png;
 edit-redo.png;
+edit-redo-22x22.png;
 edit-select-all.png;
 edit-undo.png;
+edit-undo-22x22.png;
 emblem-photos.png;
 emblem-readonly.png;
 emblem-system.png;
@@ -7458,8 +8127,10 @@ ims.png;
 imsexport.png;
 link-new-22x22.png;
 list-add.png;
+list-add-22x22.png;
 log.png;
 mail-message-new.png;
+mail-message-new-22x22.png;
 mail-reply-all.png;
 mail-reply-sender.png;
 messalog.png;
@@ -7474,22 +8145,29 @@ preferences-desktop-remote-desktop.png;
 preferences-desktop-theme.png;
 preferences-desktop-wallpaper.png;
 preferences-system-windows.png;
+rcrs-22x22.png;
 receipt_number.png;
 recover.png;
 remotecontrol.png;
 resversion.png;
+role_hotlist-22x22.png;
+rsrv-22x22.png;
 save-22x22.png;
 scoreupfrm.png;
 selfenrl-queue.png;
+selfenrl-queue-22x22.png;
 sequence.png;
 simple.png;
 simpprob.png;
 start-here.png;
+start-here-22x22.png;
 subtimpl.png;
 syllabus.png;
 symbs.png;
 system-lock-screen.png;
 system-users.png;
+timer.png;
+trck-22x22.png;
 ungrade_sub.png;
 uplcrs.png;
 uploadscores.png;
@@ -7497,6 +8175,7 @@ verify.png;
 view-mode-22x22.png;
 wishlist.png;
 wishlist-link.png;
+wishlist-link-lighter.png;
 </filenames>
 </fileglob>
 <file>
@@ -7746,7 +8425,7 @@ file that allows setuid password privile
 <file>
 <source>loncom/init.d/loncontrol</source>
 <target dist='default'>etc/rc.d/init.d/loncontrol</target>
-<target dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</target>
+<target dist='suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/init.d/loncontrol</target>
 <categoryname>root script</categoryname>
 <description>
 Controls the launching/halting of lonc, lond, and lonsql processes.
@@ -7754,7 +8433,7 @@ Controls the launching/halting of lonc,
 </file>
 <link>
 <linkto dist='default'>etc/rc.d/init.d/loncontrol</linkto>
-<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>etc/init.d/loncontrol</linkto>
+<linkto dist='suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>etc/init.d/loncontrol</linkto>
 <target dist='default'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
@@ -7764,7 +8443,7 @@ etc/rc.d/rc4.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target='suse9.2 suse9.3 sles9 sles10 sles11 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1'>
+<target='suse9.2 suse9.3 sles9 sles10 sles11 sles12 suse10.1 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2'>
 etc/rc.d/rc0.d/K05loncontrol;
 etc/rc.d/rc1.d/K05loncontrol;
 etc/rc.d/rc2.d/K05loncontrol;
@@ -7772,7 +8451,7 @@ etc/rc.d/rc3.d/S95loncontrol;
 etc/rc.d/rc5.d/S95loncontrol;
 etc/rc.d/rc6.d/K05loncontrol
 </target>
-<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10'>
+<target dist='debian5 debian6 ubuntu6 ubuntu8 ubuntu10 ubuntu12 ubuntu14'>
 etc/rc0.d/K05loncontrol;
 etc/rc1.d/K05loncontrol;
 etc/rc2.d/S95loncontrol;
@@ -7787,13 +8466,13 @@ symbolic links to /etc/rc.d/init.d/lonco
 </description>
 </link>
 
-<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
+<file dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 sles9 sles10 sles11 sles12">
   <source>loncom/init.d/loncontrol</source>
   <target>etc/rc.d/</target>
   <description>
     setup loncontrol to run at boot
   </description>
-  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 sles9 sles10 sles11">
+  <installscript dist="suse9.2 suse9.3 suse10.2 suse10.3 suse11.1 suse11.2 suse11.3 suse11.4 suse12.1 suse12.2 suse12.3 suse13.1 suse13.2 sles9 sles10 sles11 sles12">
 -c 'chkconfig --del loncontrol;chkconfig loncontrol 35;chkconfig --list loncontrol'
   </installscript>
   <dependencies>
@@ -8053,6 +8732,15 @@ Module for displaying the wishlist.</des
 <status>works/unverified</status>
 </file>
 <file>
+<source>loncom/interface/lonrelrequtils.pm</source>
+<target dist='default'>home/httpd/lib/perl/Apache/lonrelrequtils.pm</target>
+<categoryname>handler</categoryname>
+<description>
+Utilities to update information about LON-CAPA version requirements 
+in a course.</description>
+<status>works/unverified</status>
+</file>
+<file>
   <source>loncom/automation/Autocreate.pl</source>Autocreate.pl
   <target dist='default'>home/httpd/perl/Autocreate.pl</target>
   <categoryname>script</categoryname>
@@ -8080,6 +8768,7 @@ login_count.pl;
 modify_config_files.pl;
 move_construction_spaces.pl;
 parse_scantron.pl;
+rebuild_db_from_hist.pl;
 seed_accesscount.pl;
 stress.pl;
 testkerberos.pl;
@@ -8099,6 +8788,17 @@ user_login_count.pl;
 create_db_dynamic_64_so.3;
 </filenames>
 </fileglob>
+
+<fileglob>
+    <glob>*.*</glob>
+    <sourcedir>loncom/html/adm/codemirror/</sourcedir>
+    <targetdir>home/httpd/html/adm/codemirror/</targetdir>
+    <categoryname>script</categoryname>
+    <description>
+Codemirror for xml editor and script blocks in colorful editor
+    </description>
+</fileglob>
+
 <file>
 <source>loncom/debugging_tools/compiled/create_db_dynamic</source>
 <target dist='default'>home/httpd/perl/debug/create_db_dynamic</target>