--- rat/lonratedt.pm	2006/04/13 19:00:57	1.76
+++ rat/lonratedt.pm	2008/11/20 14:38:00	1.91
@@ -1,7 +1,7 @@
 # The LearningOnline Network with CAPA
 # Edit Handler for RAT Maps
 #
-# $Id: lonratedt.pm,v 1.76 2006/04/13 19:00:57 albertel Exp $
+# $Id: lonratedt.pm,v 1.91 2008/11/20 14:38:00 jms Exp $
 #
 # Copyright Michigan State University Board of Trustees
 #
@@ -29,378 +29,16 @@
 
 package Apache::lonratedt;
 
-=pod
-
-=head1 NAME
-
-Apache::lonratedt: simple resource assembly tool
-
-=head1 SYNOPSIS
-
-lonratedt provides the routines and the handler for the Advanced
-    Resource Assembly Tool (RAT), and ties the various pieces together
-    with Javascript.
-
-=head1 OVERVIEW
-
-=head2 Map Representation
-
-=begin latex
-
-%
-\begin{figure}
-\begin{center}\includegraphics[%
-  width=0.55\paperwidth,bb = 0 0 200 100, draft, type=eps]{Map_Example}\end{center}
-
-
-\caption{\label{Map_In_Advanced_Editor}Example of a Map in the Advanced Editor}
-\end{figure}
-%
-\begin{figure}
-\begin{lyxcode}
-<map>
-
-~~<resource~id=\char`\"{}1\char`\"{}
-
-~~~~src=\char`\"{}/res/msu/korte/phy231welcome.html\char`\"{}
-
-~~~~type=\char`\"{}start\char`\"{}
-
-~~~~title=\char`\"{}Start\char`\"{}>
-
-~~~~</resource>
-
-~~<resource~id=\char`\"{}2\char`\"{}
-
-~~~~src=\char`\"{}\char`\"{}~type=\char`\"{}finish\char`\"{}
-
-~~~~title=\char`\"{}Finish\char`\"{}>
-
-~~~~</resource>
-
-~~<resource~id=\char`\"{}6\char`\"{}
-
-~~~~src=\char`\"{}/res/msu/korte/tests/units.problem\char`\"{}
-
-~~~~type=\char`\"{}mandatory\char`\"{}
-
-~~~~title=\char`\"{}Physical~Units~Test\char`\"{}>
-
-~~~~</resource>
-
-~~<resource~id=\char`\"{}9\char`\"{}
-
-~~~~src=\char`\"{}/res/msu/korte/chapters/onedim.sequence\char`\"{}
-
-~~~~title=\char`\"{}Motion~in~One~Dimension\char`\"{}>
-
-~~~~</resource>
-
-~~<resource~id=\char`\"{}11\char`\"{}
-
-~~~~src=\char`\"{}/res/msu/bauer/bridges/units.sequence\char`\"{}
-
-~~~~title=\char`\"{}Physical~Units~Refresher\char`\"{}>
-
-~~~~</resource>
-
-~~<condition~id=\char`\"{}19\char`\"{}
-
-~~~~type=\char`\"{}stop\char`\"{}
-
-~~~~value=\char`\"{}user.assessments{[}this./res/msu/korte/tests/units.problem{]}.status=solved\char`\"{}>
-
-~~~~</condition>
-
-~~<link~from=\char`\"{}1\char`\"{}~to=\char`\"{}6\char`\"{}></link>
-
-~~<link~from=\char`\"{}6\char`\"{}~to=\char`\"{}9\char`\"{}~condition=\char`\"{}19\char`\"{}></link>
-
-~~<link~from=\char`\"{}6\char`\"{}~to=\char`\"{}11\char`\"{}></link>
-
-~~<link~from=\char`\"{}11\char`\"{}~to=\char`\"{}6\char`\"{}></link>
-
-~~</map>
-\end{lyxcode}
-
-\caption{\label{XML}XML for Map in Figure \ref{Map_In_Advanced_Editor}}
-\end{figure}
-
-=end latex
-
-Fig. "XML for Map in Figure" shows the XML representation of the
-resource map shown in Fig. "Example of a Map in the Advanced Editor",
-which is the format in which maps are stored. In the figure, however,
-additional graphical map layout information generated by the Advanced
-Resource Assembly Tool is not displayed. This graphical information is
-optional to re-generate the same graphical layout when the map is
-brought up again in the Resource Assembly Tool, and is not needed for
-any other system functionality.
-
-Maps can be generated by tools other than the Resource Assembly
-Tool. In particular, an author might have some other representation of
-a course sequence, which can be converted into a map using scripts. If
-this map then were to be brought up in the Resource Assembly Tool, the
-Tool would automatically generate a graphical layout for it. Each
-entry of the map (resources, conditions and links) is stored in a
-separate tag.
-
-Resources and conditionsX<conditions> have to have unique ID
-numbers. These numbers are automatically generated by the Resource
-Assembly Tool when the entry is first created, or added to the entries
-when a map generated outside the Resource Assembly Tool is first
-retrieved. They can also be assigned by custom scripts or added in by
-hand.
-
-In the XML example, entry 1 is the start resource of the map. When
-this map is accessed, the source (src) URL of this tag will be the
-first resource rendered. Entry 2 is the finish resource of this
-map. This resource will be the last resource in the sequence of
-resources. Entry 6 is a problem resource with the given URL and title,
-as well as the priority "mandatory". Entry 19 is a condition, which is
-used by the link between entries 6, the problem, and 9, a
-sequence. I<The final syntax for conditions has not yet been
-determined.>
-
-=cut
-
 use strict;
 use Apache::Constants qw(:common);
 use Apache::lonnet;
-use Apache::lonratsrv;
-use Apache::lonsequence;
-use Apache::loncommon;
+use Apache::lonsequence();
+use Apache::loncommon();
 use Apache::lonlocal;
+use LONCAPA::map();
 use File::Copy;
-
-use vars qw(@order @resources @resparms @zombies);
-
-
-# Mapread read maps into global arrays @links and @resources, determines status
-# sets @order - pointer to resources in right order
-# sets @resources - array with the resources with correct idx
-#
-sub mapread {
-    my $fn=shift;
-
-    my @links;
-    undef @links;
-    undef @resources;
-    undef @order;
-    undef @resparms;
-    undef @zombies;
-
-    @resources=('');
-    @order=();
-    @resparms=();
-    @zombies=();
-
-    my ($outtext,$errtext)=&Apache::lonratsrv::loadmap($fn,'');
-    if ($errtext) { return ($errtext,2); }
-
-# -------------------------------------------------------------------- Read map
-    foreach (split(/\<\&\>/,$outtext)) {
-	my ($command,$number,$content)=split(/\<\:\>/,$_);
-        if ($command eq 'objcont') {
-	    my ($title,$src,$ext,$type)=split(/\:/,$content);
-	    if ($ext eq 'cond') { next; }
-	    if ($type ne 'zombie') {
-		$resources[$number]=$content;
-	    } else {
-		$zombies[$number]=$content;
-	    }
-        }
-        if ($command eq 'objlinks') {
-            $links[$number]=$content;
-        }
-        if ($command eq 'objparms') {
-	    if ($resparms[$number]) {
-		$resparms[$number].='&&&'.$content;
-	    } else {
-		$resparms[$number]=$content;
-	    }
-        }
-    }
-# ------------------------------------------------------- Is this a linear map?
-    my @starters=();
-    my @endings=();
-    undef @starters;
-    undef @endings;
-
-    foreach (@links) {
-        if (defined($_)) {
-	    my ($start,$end,$cond)=split(/\:/,$_);
-            if ((defined($starters[$start])) || (defined($endings[$end]))) { 
-		return
-                 (&mt('Map has branchings. Use advanced editor.'),1);
-            }
-	    $starters[$start]=1;
-	    $endings[$end]=1;
-	    if ($cond) {
-		return
-                 (&mt('Map has conditions. Use advanced editor.'),1);
-            }
-	}
-
-    }
-    for (my $i=1; $i<=$#resources; $i++) {
-        if (defined($resources[$i])) {
-	    unless (($starters[$i]) || ($endings[$i])) {
-                return
-		 (&mt('Map has unconnected resources. Use advanced editor.'),1);
-            }
-        }
-    }
-# ---------------------------------------------- Did we just read an empty map?
-    if ($#resources<1) {
-        undef $resources[0];
-	$resources[1]=':::start';
-        $resources[2]=':::finish';
-    }
-# -------------------------------------------------- This is a linear map, sort
-
-    my $startidx=0;
-    my $endidx=0;
-    for (my $i=0; $i<=$#resources; $i++) {
-        if (defined($resources[$i])) {
-            my ($title,$url,$ext,$type)=split(/\:/,$resources[$i]);
-	    if ($type eq 'start') { $startidx=$i; }
-            if ($type eq 'finish') { $endidx=$i; }
-        }
-    }
-    my $k=0;
-    my $currentidx=$startidx;
-    $order[$k]=$currentidx;
-    for (my $i=0; $i<=$#resources; $i++) {
-        foreach (@links) {
-	    my ($start,$end)=split(/\:/,$_);
-            if ($start==$currentidx) {
-		$currentidx=$end;
-                $k++;
-                $order[$k]=$currentidx;
-                last;
-            }
-        }
-        if ($currentidx==$endidx) { last; }
-    }
-    return $errtext;
-}
-
-# ---------------------------------------------- Read a map as well as possible
-# Also used by the sequence handler
-# Call lonsequence::attemptread to read from resource space
-#
-sub attemptread {
-    my $fn=shift;
-
-    my @links;
-    undef @links;
-    my @theseres;
-    undef @theseres;
-
-    my ($outtext,$errtext)=&Apache::lonratsrv::loadmap($fn,'');
-    if ($errtext) { return @theseres }
-
-# -------------------------------------------------------------------- Read map
-    foreach (split(/\<\&\>/,$outtext)) {
-	my ($command,$number,$content)=split(/\<\:\>/,$_);
-        if ($command eq 'objcont') {
-	    my ($title,$src,$ext,$type)=split(/\:/,$content);
-	    unless ($type eq 'zombie') {
-		$theseres[$number]=$content;
-	    }
-        }
-        if ($command eq 'objlinks') {
-            $links[$number]=$content;
-        }
-    }
-
-# --------------------------------------------------------------- Sort, sort of
-
-    my @objsort=();
-    undef @objsort;
-
-    my @data1=();
-    my @data2=();
-    undef @data1;
-    undef @data2;
-
-    my $k;
-    my $kj;
-    my $j;
-    my $ij;
-
-   for ($k=1;$k<=$#theseres;$k++) {
-      if (defined($theseres[$k])) {
-         $objsort[$#objsort+1]=$k;
-      }
-   }
-
-   for ($k=1;$k<=$#links;$k++) {
-     if (defined($links[$k])) {
-      @data1=split(/\:/,$links[$k]);
-      $kj=-1;
-      for (my $j=0;$j<=$#objsort;$j++) {
-         if ((split(/\:/,$objsort[$j]))[0]==$data1[0]) {
-            $kj=$j;
-         }
-      }
-      if ($kj!=-1) { $objsort[$kj].=':'.$data1[1]; }
-     }
-   }
-    for ($k=0;$k<=$#objsort;$k++) {
-      for ($j=0;$j<=$#objsort;$j++) {
-        if ($k!=$j) {
-          @data1=split(/\:/,$objsort[$k]);
-          @data2=split(/\:/,$objsort[$j]);
-          my $dol=$#data1+1;
-          my $dtl=$#data2+1;
-          if ($dol+$dtl<1000) {
-           for ($kj=1;$kj<$dol;$kj++) {
-             if ($data1[$kj]==$data2[0]) {
-                for ($ij=1;$ij<$dtl;$ij++) {
-                   $data1[$#data1+1]=$data2[$ij];
-                }
-             }
-           }
-           for ($kj=1;$kj<$dtl;$kj++) {
-             if ($data2[$kj]==$data1[0]) {
-                 for ($ij=1;$ij<$dol;$ij++) {
-                    $data2[$#data2+1]=$data1[$ij];
-                 }
-             }
-           }
-           $objsort[$k]=join(':',@data1);
-           $objsort[$j]=join(':',@data2);
-          }
-         }
-      } 
-  }
-# ---------------------------------------------------------------- Now sort out
-
-    @objsort=sort {
-      my @data1=split(/\:/,$a);
-      my @data2=split(/\:/,$b);
-      my $rvalue=0;
-      my $k;
-      for ($k=1;$k<=$#data1;$k++) {
-         if ($data1[$k]==$data2[0]) { $rvalue--; }
-      }
-      for ($k=1;$k<=$#data2;$k++) {
-         if ($data2[$k]==$data1[0]) { $rvalue++; }
-      }
-      if ($rvalue==0) { $rvalue=$#data2-$#data1; }
-      $rvalue;
-    } @objsort;
-
-    my @outres=();
-    undef @outres;
-
-    for ($k=0;$k<=$#objsort;$k++) {
-	$outres[$k]=$theseres[(split(/\:/,$objsort[$k]))[0]];
-    }
-    return @outres;
-}
+use LONCAPA;
+use HTML::Entities();
 
 # --------------------------------------------------------- Build up RAT screen
 sub ratedt {
@@ -452,201 +90,11 @@ sub buttons {
     return $output.'</form><hr>';
 }
 
-# ------------------------------------- Revive zombie idx or get unused number
-
-sub getresidx {
-    my $url=shift;
-    my $max=1+($#resources>$#zombies?$#resources:$#zombies);
-    unless ($url) { return $max; }
-    for (my $i=0; $i<=$#zombies; $i++) {
-	my ($title,$src,$ext,$type)=split(/\:/,$zombies[$i]);
-	if ($src eq $url) {
-	    undef $zombies[$i];
-	    return $i;
-	}
-    }
-    return $max;
-}
-
-# --------------------------------------------------------------- Make a zombie
-
-sub makezombie {
-    my $idx=shift;
-    my ($name,$url,$ext)=split(/\:/,$resources[$idx]);
-    my $now=time;
-    $zombies[$idx]=$name.
-	' [('.$now.','.$env{'user.name'}.','.$env{'user.domain'}.')]:'.
-	$url.':'.$ext.':zombie';
-}
-
-# ----------------------------------------------------------- Paste into target
-# modifies @order, @resources
-
-sub pastetarget {
-    my ($after,@which)=@_;
-    my @insertorder=();
-    foreach (@which) {
-        if (defined($_)) {
-	    my ($name,$url)=split(/\=/,$_);
-            $name=&Apache::lonnet::unescape($name);
-            $url=&Apache::lonnet::unescape($url);
-            if ($url) {
-	       my $idx=&getresidx($url);
-               $insertorder[$#insertorder+1]=$idx;
-               my $ext='false';
-               if ($url=~/^http\:\/\//) { $ext='true'; }
-               $url=~s/\:/\&colon;/g;
-               $name=~s/\:/\&colon;/g;
-               $resources[$idx]=$name.':'.$url.':'.$ext.':normal:res';
-	   }
-        }
-    }
-    my @oldorder=splice(@order,$after);
-    @order=(@order,@insertorder,@oldorder);
-}
-
-# ------------------------------------------------ Get start and finish correct
-# modifies @resources
-
-sub startfinish {
-# Remove all start and finish
-    foreach (@order) {
-	my ($name,$url,$ext)=split(/\:/,$resources[$_]);
-        if ($url=~/http\&colon\:\/\//) { $ext='true'; }
-        $resources[$_]=$name.':'.$url.':'.$ext.':normal:res';
-    }
-# Garbage collection
-    my $stillchange=1;
-     while (($#order>1) && ($stillchange)) {
-       $stillchange=0;
-       for (my $i=0;$i<=$#order;$i++) {
- 	  my ($name,$url,$ext)=split(/\:/,$resources[$order[$i]]);
-          unless ($url) {
-# Take out empty resource
-              for (my $j=$i+1;$j<=$#order;$j++) {
-                  $order[$j-1]=$order[$j];
-	      }
-              $#order--;
-	      $stillchange=1;
-              last;
-          }
-       }
-    }
-# Put in a start resource
-   my ($name,$url,$ext)=split(/\:/,$resources[$order[0]]);
-   $resources[$order[0]]=$name.':'.$url.':'.$ext.':start:res';
-# Make sure this has at least start and finish
-   if ($#order==0) {
-       $resources[&getresidx()]='::false';
-       $order[1]=$#resources;
-   }
-# Make the last one a finish resource
-   ($name,$url,$ext)=split(/\:/,$resources[$order[$#order]]);
-   $resources[$order[$#order]]=$name.':'.$url.':'.$ext.':finish:res';
-}
-
-# ------------------------------------------------------------------- Store map
-
-sub storemap {
-    my $realfn=shift;
-    my $fn=$realfn;
-# unless this is forced to work from the original file, use a temporary file
-# instead
-    unless (shift) {
-       $fn=$realfn.'.tmp';
-       unless (-e $fn) {
-	  copy($realfn,$fn);
-       }
-    }
-# store data either into tmp or real file
-    &startfinish();
-    my $output='graphdef<:>no';
-    my $k=1;
-    for (my $i=0; $i<=$#order; $i++) {
-        if (defined($resources[$order[$i]])) {
-	    $output.='<&>objcont<:>'.$order[$i].'<:>'.$resources[$order[$i]];
-        }
-	if (defined($resparms[$order[$i]])) {
-	    foreach (split('&&&',$resparms[$order[$i]])) {
-		if ($_) {
-		    $output.='<&>objparms<:>'.$order[$i].'<:>'.$_;
-		}
-	    }
-	}
-        if (defined($order[$i+1])) {
-	    if (defined($resources[$order[$i+1]])) {
-               $output.='<&>objlinks<:>'.$k.'<:>'.
-		   $order[$i].':'.$order[$i+1].':0';
-	       $k++;
-            }
-        }
-    }
-    for (my $i=0; $i<=$#zombies; $i++) {
-        if (defined($zombies[$i])) {
-	    $output.='<&>objcont<:>'.$i.'<:>'.$zombies[$i];
-        }
-    }
-    $output=~s/http\&colon\;\/\///g;
-    $env{'form.output'}=$output;
-    return 
-     &Apache::lonratsrv::loadmap($fn,&Apache::lonratsrv::savemap($fn,''));
-}
-
-# ------------------------------------------ Store and get parameters in global
-
-sub storeparameter {
-    my ($to,$name,$value,$ptype)=@_;
-    my $newentry='';
-    my $nametype='';
-    foreach (split('&&&',$resparms[$to])) {
-	my ($thistype,$thisname,$thisvalue)=split('___',$_);
-	if ($thisname) {
-	    unless ($thisname eq $name) {
-		$newentry.=$_.'&&&';
-	    } else {
-		$nametype=$thistype;
-	    }
-	}
-    }
-    unless ($ptype) { $ptype=$nametype; }
-    unless ($ptype) { $ptype='string'; }
-    $newentry.=$ptype.'___'.$name.'___'.$value;
-    $resparms[$to]=$newentry;
-}
-
-sub delparameter {
-    my ($to,$name)=@_;
-    my $newentry='';
-    my $nametype='';
-    foreach (split('&&&',$resparms[$to])) {
-	my ($thistype,$thisname,$thisvalue)=split('___',$_);
-	if ($thisname) {
-	    unless ($thisname eq $name) {
-		$newentry.=$_.'&&&';
-	    }
-	}
-    }
-    $resparms[$to]=$newentry;
-}
-
-sub getparameter {
-    my ($to,$name)=@_;
-    my $value=undef;
-    my $ptype=undef;
-    foreach (split('&&&',$resparms[$to])) {
-	my ($thistype,$thisname,$thisvalue)=split('___',$_);
-	if ($thisname eq $name) {
-	    $value=$thisvalue;
-	    $ptype=$thistype;
-	}
-    }
-    return ($value,$ptype);
-}
-
 # ----------------------------------------------------------------- Edit script
 sub editscript {
     my $mode=shift;
-    my $resurl=&Apache::loncommon::lastresurl();
+    my $resurl=
+	&Apache::loncommon::escape_single(&Apache::loncommon::lastresurl());
     return(<<ENDSCRIPT);
 var srch;
 var srchflag=-1; // 1 means currently open
@@ -688,18 +136,18 @@ function srchclose() {
 
 // -------------------------------------------------------- Open indexer window
 function idxopen(mode) {
-   var options="scrollbars=1,resizable=1,menubar=0";
+   var options="scrollbars=1,resizable=1,menubar=0,location=1,toolbar=1";
    idxmode=mode;
    idxflag=1;
-   idx=open("$resurl/?launch=1&mode=$mode&catalogmode="+mode,"idxout",options);
+   idx=open('$resurl/?inhibitmenu=yes&launch=1&mode=$mode&catalogmode='+mode,'idxout',options);
    idx.focus();
 }
 
 // ------------------------------------------------------ Open groupsort window
-function groupopen(url,recover) {
+function groupopen(url,recover,bookmarks) {
    var options="scrollbars=1,resizable=1,menubar=0";
    idxflag=1;
-   idx=open("/adm/groupsort?mode=$mode&recover="+recover+"&readfile="+url,"idxout",options);
+   idx=open("/adm/groupsort?inhibitmenu=yes&mode=$mode&recover="+recover+"&readfile="+url+"&bookmarks="+bookmarks,"idxout",options);
    idx.focus();
 }
 
@@ -708,16 +156,16 @@ function srchopen(mode) {
    var options="scrollbars=1,resizable=1,menubar=0";
    srchmode=mode;
    srchflag=1;
-   srch=open("/adm/searchcat?launch=1&mode=$mode&catalogmode="+mode,"srchout",options);
+   srch=open("/adm/searchcat?inhibitmenu=yes&launch=1&mode=$mode&catalogmode="+mode,"srchout",options);
    srch.focus();
 }
 // ----------------------------------------------------- launch indexer browser
 function groupsearch() {
-   srchcheck('groupsearch');
+   srchcheck('import');
 }
 
 function groupimport() {
-   idxcheck('groupimport');
+   idxcheck('import');
 }
 
 // ------------------------------------------------------- Do srch status check
@@ -743,6 +191,7 @@ function idxcheck(mode) {
         if (editbrowser == null) {
             url += 'launch=1&';
         }
+        url += 'inhibitmenu=yes&';
         url += 'catalogmode=interactive&';
         url += 'mode=edit&';
         url += 'form=' + formname + '&';
@@ -754,7 +203,7 @@ function idxcheck(mode) {
         }
         url += 'element=' + elementname + '';
         var title = 'Browser';
-        var options = 'scrollbars=1,resizable=1,menubar=0';
+        var options = 'scrollbars=1,resizable=1,menubar=0,toolbar=1,location=1';
         options += ',width=700,height=600';
         editbrowser = open(url,title,options,'1');
         editbrowser.focus();
@@ -772,23 +221,23 @@ sub smpedt {
        copy($tmpfn,&Apache::lonnet::filelocation('',$url));
        unlink($tmpfn);
        my ($errtext,$fatal)=
-                           &mapread(&Apache::lonnet::filelocation('',$url),'');
+	   &LONCAPA::map::mapread(&Apache::lonnet::filelocation('',$url),'');
        unless ($fatal) {
 	   $targetmsg='<b>'.&mt('Saved.').'</b><br />';
        } else {
-	   $targetmsg='<b>'.&mt('An error occured while saving.').'</b><br />';
+	   $targetmsg='<b>'.&mt('An error occurred while saving.').'</b><br />';
        }
    }
    if ($env{'form.revert'}) {
        $targetmsg='<b>'.&mt('Reverted.').'</b><br />';
        unlink($tmpfn);
        my ($errtext,$fatal)=
-                           &mapread(&Apache::lonnet::filelocation('',$url),'');
+	   &LONCAPA::map::mapread(&Apache::lonnet::filelocation('',$url),'');
    }
    if (-e $tmpfn) {
       $targetmsg=
         '<b><font color="red">'.&mt('You are working with an unsaved version of your map.').'</font></b><br>';
-      my ($errtext,$fatal)=&mapread($tmpfn,'');
+      my ($errtext,$fatal)=&LONCAPA::map::mapread($tmpfn,'');
    }
 # ---------------------------------------------------------- Process form input
 
@@ -871,8 +320,8 @@ sub smpedt {
     &Apache::lonsequence::attemptread(&Apache::lonnet::filelocation('',$env{'form.importmap'}))) {
 	   my ($name,$url)=split(/\:/,$_);
            if ($url) {
-              $importdetail.='&'.&Apache::lonnet::escape($name).'='.
-		 	         &Apache::lonnet::escape($url);
+              $importdetail.='&'.&escape($name).'='.
+		 	         &escape($url);
 	  }
        }
 
@@ -891,10 +340,10 @@ sub smpedt {
        if (defined($targetselect[-1])) {
 	   $lastsel=$targetselect[-1];
        } else {
-           $lastsel=$#order+1;
+           $lastsel=$#LONCAPA::map::order+1;
        }
-       &pastetarget($lastsel,split(/\&/,$env{'form.importdetail'}));
-       &storemap(&Apache::lonnet::filelocation('',$url));
+       &LONCAPA::map::pastetarget($lastsel,split(/\&/,$env{'form.importdetail'}));
+       &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));
 # ------------------------------------------------------------------------- Cut
    } elsif (($env{'form.cut'}) || ($env{'form.copy'})) {
        $importdetail='';
@@ -916,10 +365,10 @@ sub smpedt {
        }
 
        foreach (@targetselect) {
-	   my ($name,$url)=split(/\:/,$resources[$order[$_-1]]);
+	   my ($name,$url)=split(/\:/,$LONCAPA::map::resources[$LONCAPA::map::order[$_-1]]);
            if ($url) {
-              $importdetail.='&'.&Apache::lonnet::escape($name).'='.
-		 	         &Apache::lonnet::escape($url);
+              $importdetail.='&'.&escape($name).'='.
+		 	         &escape($url);
 	  }
        }
 
@@ -934,19 +383,19 @@ sub smpedt {
 
        if ($env{'form.cut'}) {
            my @neworder=();
-           for (my $i=0;$i<=$#order;$i++) {
+           for (my $i=0;$i<=$#LONCAPA::map::order;$i++) {
                my $include=1;
                foreach (@targetselect) {
 		   if ($_-1==$i) { $include=0; }
                }
                if ($include) { 
-		   $neworder[$#neworder+1]=$order[$i]; 
+		   $neworder[$#neworder+1]=$LONCAPA::map::order[$i]; 
 	       } else {
-		   &makezombie($order[$i]);
+		   &LONCAPA::map::makezombie($LONCAPA::map::order[$i]);
 	       }
            }
-           @order=@neworder;
-           &storemap(&Apache::lonnet::filelocation('',$url));      
+           @LONCAPA::map::order=@neworder;
+           &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));      
        }
 
 # ----------------------------------------------------------------------- Paste
@@ -955,43 +404,43 @@ sub smpedt {
        if (defined($targetselect[-1])) {
 	   $lastsel=$targetselect[-1];
        } else {
-           $lastsel=$#order+1;
+           $lastsel=$#LONCAPA::map::order+1;
        }
        my @newsequence;
        my @curimport=split(/\&/,$env{'form.curimpdetail'});
        foreach (@importselect) {
           $newsequence[$#newsequence+1]=$curimport[$_];
        }
-       &pastetarget($lastsel,@newsequence);
-       &storemap(&Apache::lonnet::filelocation('',$url));
+       &LONCAPA::map::pastetarget($lastsel,@newsequence);
+       &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));
 # -------------------------------------------------------------------- Move up 
    } elsif ($env{'form.moveup'}) {
        foreach (sort @targetselect) {
            if ($_-1>0) {
-              my $movethis=$order[$_-1];
-              $order[$_-1]=$order[$_-2];
-              $order[$_-2]=$movethis;
+              my $movethis=$LONCAPA::map::order[$_-1];
+              $LONCAPA::map::order[$_-1]=$LONCAPA::map::order[$_-2];
+              $LONCAPA::map::order[$_-2]=$movethis;
 	  }
        }
-       &storemap(&Apache::lonnet::filelocation('',$url));
+       &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));
 # ------------------------------------------------------------------ Move down
    } elsif ($env{'form.movedown'}) {
        foreach (reverse sort @targetselect) {
-           if ($_-1<$#order) {
-              my $movethis=$order[$_-1];
-              $order[$_-1]=$order[$_];
-              $order[$_]=$movethis;
+           if ($_-1<$#LONCAPA::map::order) {
+              my $movethis=$LONCAPA::map::order[$_-1];
+              $LONCAPA::map::order[$_-1]=$LONCAPA::map::order[$_];
+              $LONCAPA::map::order[$_]=$movethis;
 	   }
        }
-       &storemap(&Apache::lonnet::filelocation('',$url));
+       &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));
 # --------------------------------------------------------------------- Rename
    } elsif ($env{'form.renameres'}) {
-       my $residx=$Apache::lonratedt::order[$env{'form.renameidx'}-1];
-       my ($name,@resrest)=split(/\:/,$Apache::lonratedt::resources[$residx]);
+       my $residx=$LONCAPA::map::order[$env{'form.renameidx'}-1];
+       my ($name,@resrest)=split(/\:/,$LONCAPA::map::resources[$residx]);
        $name=$env{'form.renametitle'};
        $name=~s/\:/\&colon\;/g;
-       $Apache::lonratedt::resources[$residx]=$name.':'.join(':',@resrest);
-       &storemap(&Apache::lonnet::filelocation('',$url));
+       $LONCAPA::map::resources[$residx]=$name.':'.join(':',@resrest);
+       &LONCAPA::map::storemap(&Apache::lonnet::filelocation('',$url));
    }
 # ------------------------------------------------------------ Assemble windows
    
@@ -1006,7 +455,7 @@ sub smpedt {
           my ($name,$url)=split(/\=/,$_);
           unless ($name) { $name=(split(/\//,$url))[-1]; }
           unless ($name) { $name='EMPTY'; }
-          '<option value="'.$idx.'">'.&Apache::lonnet::unescape($name).
+          '<option value="'.$idx.'">'.&unescape($name).
                                     '</option>';
       }
    } split(/\&/,$importdetail));
@@ -1016,15 +465,17 @@ sub smpedt {
    my $targetwindow=       
        '<option value="0"> ------- '.&mt('Target Edit Map').' ------- </option>'.
      join("\n",map { 
-       my ($name,$url)=split(/\:/,$resources[$_]);
+       my ($name,$url)=split(/\:/,$LONCAPA::map::resources[$_]);
        unless ($name) {  $name=(split(/\//,$url))[-1]; }
        unless ($name) { $name='EMPTY'; }
-       $targetdetail.='&'.&Apache::lonnet::escape($name).'='.
-	                  &Apache::lonnet::escape($url);
+       $name = &LONCAPA::map::qtescape($name);
+       $url  = &LONCAPA::map::qtescape($url);
+       $targetdetail.='&'.&escape($name).'='.
+	                  &escape($url);
        $idx++;
-       $name=~s/\&colon;/\:/g;
+       $name = &HTML::Entities::encode($name,'\'"<>&');
        '<option value="'.$idx.'">'.$name.'</option>';
-   } @order);
+   } @LONCAPA::map::order);
 
 # ----------------------------------------------------- Start simple RAT screen
    my $editscript=&editscript('simple');
@@ -1034,6 +485,7 @@ sub smpedt {
 				      'nt' => 'New Title',
 				      'se' => 'Search',
 				      'im' => 'Import',
+                                      'bk' => 'Import Bookmarks',
 				      'vi' => 'View',
 				      'lm' => 'Load Map',
 				      'ds' => 'Discard Selected',
@@ -1051,15 +503,13 @@ sub smpedt {
                                       'reco' => 'Recover Deleted'
 				      );
    my $js=<<ENDJS;
-<script type="text/javascript>
+<script type="text/javascript">
 
    $editscript
 
    function openview(entry) {
        var url=unescape((entry.split('='))[1]);
        var parts=new Array;
-       parts=url.split('&colon;');
-       url=parts.join(':');
        if (url) { open(url,'cat'); }
    }
 
@@ -1078,12 +528,6 @@ sub smpedt {
        var entry=(document.forms.simpleedit.targetdetail.value.split('&'))
                 [selidx];
        var oldname=unescape((entry.split('='))[0]);
-       var nameparts=oldname.split('&colon;');
-       oldname=unescape(nameparts.join(':'));
-       nameparts=oldname.split('&#34;');
-       oldname=unescape(nameparts.join('"'));
-       nameparts=oldname.split('&#39;');
-       oldname=unescape(nameparts.join("'"));
        newtitle=prompt('$lt{'nt'}',oldname);
        if (newtitle) {
            document.forms.simpleedit.renameres.value=1;
@@ -1097,10 +541,9 @@ sub smpedt {
 ENDJS
 
     my $start_page = &Apache::loncommon::start_page(undef,$js).
-        &Apache::loncommon::help_open_menu('',
+        &Apache::loncommon::help_open_menu('Sequence_Simple_Editor_Creation',
 					   'Sequence_Simple_Editor_Creation',
-					   'Sequence_Simple_Editor_Creation',
-					   '',6,'RAT');    
+					   6,'RAT');    
     my $end_page = &Apache::loncommon::end_page();
 
     $r->print(<<ENDSMPHEAD);
@@ -1136,7 +579,9 @@ value="Select Map"><input type=submit na
 <input type=button onClick=
 "javascript:impfortarget.value=1;groupimport();" value="$lt{'im'}">
 <input type=button onClick=
-"javascript:impfortarget.value=1;javascript:groupopen('$url',1);" value="$lt{'reco'}">
+"javascript:impfortarget.value=1;groupopen(0,1,1);" value="$lt{'bk'}">
+<input type=button onClick=
+"javascript:impfortarget.value=1;groupopen('$url',1,0);" value="$lt{'reco'}">
 $lt{'as'}
 <hr>
 <input type=submit name="moveup" value="$lt{'mu'}">
@@ -1178,7 +623,7 @@ ENDSMPHEAD
 # ----------------------------------------------------------------- No such dir
 sub nodir {
    my ($r,$dir)=@_;
-   $dir=~s{^/home/\w+/public_html}{};
+   $dir=~s{^/home/$LONCAPA::username_re/public_html}{};
    $r->print(&Apache::loncommon::start_page(undef,undef,
 					    {'only_body' => 1,
 					     'bgcolor'   => '#FFFFFF',}).
@@ -1192,34 +637,42 @@ sub viewmap {
     my ($r,$url,$adv,$errtext)=@_;
     $r->print(
 	      &Apache::loncommon::start_page('Edit Content of a Map').
-	      &Apache::loncommon::help_open_menu('','','','',6,'RAT').
+	      &Apache::loncommon::help_open_menu('','',6,'RAT').
 	      &buttons($adv));
     if ($errtext) {
-	$r->print($errtext.'<hr />');
+	$r->print('<div class="LC_error">'
+                 .$errtext
+                 .'</div>'
+                 .'<hr />'
+        );
     }
     my $idx=0;
     $r->print('<h1>'.$url.'</h1>');
     if ($adv) {
-	$r->print('<p><b><font color="red">'.&mt('Map contents are not shown in order.').'</font></b></p><br />');
-    }
-    $r->print( '<table border="0" cellspacing="2" cellpadding="4">'.
-               '<tr bgcolor="#DDDDDD"><th>'.&mt('Type').'</th>'.
-               '<th>'.&mt('Title in map').'</th>'.
-               '<th>'.&mt('Filename of resource').'</th>'.
-               '<th>'.&mt('Link to published resource').'</th>'.
-               '<th>'.&mt('Link to resource in Construction Space').'</th>'.
-               '</tr>');
-    my @backgroundColors = ("#FFFFFF", "#F6F6F6");
-    foreach (&attemptread(&Apache::lonnet::filelocation('',$url))) {
+	$r->print('<p class="LC_warning">'
+                 .&mt('Map contents are not shown in order.')
+                 .'</p><br />'
+        );
+    }
+    $r->print(&Apache::loncommon::start_data_table()
+             .&Apache::loncommon::start_data_table_header_row()
+             .'<th>'.&mt('Type').'</th>'
+             .'<th>'.&mt('Title in map').'</th>'
+             .'<th>'.&mt('Filename of resource').'</th>'
+             .'<th>'.&mt('Link to published resource').'</th>'
+             .'<th>'.&mt('Link to resource in Construction Space').'</th>'
+             .&Apache::loncommon::end_data_table_header_row()
+    );
+    foreach (&LONCAPA::map::attemptread(&Apache::lonnet::filelocation('',$url))) {
 	if (defined($_)) {
             $idx++;
 	    my ($title,$url,$cond)=split(/\:/,$_);
 	    if ($cond eq 'cond') { next; }
-            $title=~s/\&colon\;/\:/g;
-            $url=~s/\&colon\;/\:/g;
+            $title= &LONCAPA::map::qtescape($title);
+            $url  = &LONCAPA::map::qtescape($url);
             unless ($title) { $title=(split(/\//,$url))[-1] };
             unless ($title) { $title='<i>'.&mt('Empty').'</i>'; }
-            my $resurl = &Apache::lonratsrv::qtescape($url);
+            my $resurl = $url;
             my $resfilepath = $Apache::lonnet::perlvar{'lonDocRoot'}.$resurl;
             my $filename; 
             if ($resurl =~ m#/([^/]+)$#) {
@@ -1227,23 +680,34 @@ sub viewmap {
             }
             my $cstrurl = $resurl;
             $cstrurl =~ s#^/res/[^/]+/([^/]+)/#/priv/$1/#;
-            my $bgcol = $idx%2; 
-            $r->print('<tr bgcolor='.$backgroundColors[$bgcol].'><td>'.
-                      '<img src="'.&Apache::loncommon::icon($resfilepath).
-                      '" /></td><td>'.&Apache::lonratsrv::qtescape($title).
-                      '</td><td>'.$filename.'</td><td>');
+            $r->print(&Apache::loncommon::start_data_table_row()
+                     .'<td>'
+                     .'<img src="'.&Apache::loncommon::icon($resfilepath).'" />'
+                     .'</td>'
+                     .'<td>'
+                     .&HTML::Entities::encode(&LONCAPA::map::qtescape($title))
+                     .'</td>'
+                     .'<td>'.$filename.'</td>'
+                     .'<td>'
+            );
             if ($url) {
 		$r->print('<a href="'.$resurl.'">'.&mt('Resource space').'</a>');
+            } else {
+                $r->print('&nbsp;');
             }
             $r->print('</td><td>');
             if ($url) {
                $r->print('<a href="'.$cstrurl.'">'.
                          &mt('Construction space').'</a>');
+            } else {
+                $r->print('&nbsp;');
             }
-            $r->print('</td></tr>'."\n");
+            $r->print('</td>'
+                     .&Apache::loncommon::end_data_table_row()
+            );
         }
     }
-    $r->print('</table>');
+    $r->print(&Apache::loncommon::end_data_table());
     $r->print(&Apache::loncommon::end_page());
 }
 
@@ -1287,7 +751,7 @@ sub handler {
   my $fatal=0;
 
 # -------------------------------------------------------------------- Load map
-  ($errtext,$fatal)=&mapread($fn,$errtext);
+  ($errtext,$fatal)=&LONCAPA::map::mapread($fn,$errtext);
 
   if ($fatal==1) { $adv=1; }
 
@@ -1308,7 +772,140 @@ __END__
 
 
 
+=pod
+
+=head1 NAME
+
+Apache::lonratedt: simple resource assembly tool
+
+=head1 SYNOPSIS
+
+lonratedt provides the routines and the handler for the Advanced
+    Resource Assembly Tool (RAT), and ties the various pieces together
+    with Javascript.
+
+=head1 OVERVIEW
+
+=head2 Map Representation
+
+=begin latex
+
+%
+\begin{figure}
+\begin{center}\includegraphics[%
+  width=0.55\paperwidth,bb = 0 0 200 100, draft, type=eps]{Map_Example}\end{center}
+
+
+\caption{\label{Map_In_Advanced_Editor}Example of a Map in the Advanced Editor}
+\end{figure}
+%
+\begin{figure}
+\begin{lyxcode}
+<map>
+
+~~<resource~id=\char`\"{}1\char`\"{}
+
+~~~~src=\char`\"{}/res/msu/korte/phy231welcome.html\char`\"{}
+
+~~~~type=\char`\"{}start\char`\"{}
+
+~~~~title=\char`\"{}Start\char`\"{}>
+
+~~~~</resource>
+
+~~<resource~id=\char`\"{}2\char`\"{}
+
+~~~~src=\char`\"{}\char`\"{}~type=\char`\"{}finish\char`\"{}
+
+~~~~title=\char`\"{}Finish\char`\"{}>
+
+~~~~</resource>
+
+~~<resource~id=\char`\"{}6\char`\"{}
+
+~~~~src=\char`\"{}/res/msu/korte/tests/units.problem\char`\"{}
+
+~~~~type=\char`\"{}mandatory\char`\"{}
+
+~~~~title=\char`\"{}Physical~Units~Test\char`\"{}>
+
+~~~~</resource>
+
+~~<resource~id=\char`\"{}9\char`\"{}
+
+~~~~src=\char`\"{}/res/msu/korte/chapters/onedim.sequence\char`\"{}
+
+~~~~title=\char`\"{}Motion~in~One~Dimension\char`\"{}>
+
+~~~~</resource>
+
+~~<resource~id=\char`\"{}11\char`\"{}
+
+~~~~src=\char`\"{}/res/msu/bauer/bridges/units.sequence\char`\"{}
+
+~~~~title=\char`\"{}Physical~Units~Refresher\char`\"{}>
+
+~~~~</resource>
+
+~~<condition~id=\char`\"{}19\char`\"{}
+
+~~~~type=\char`\"{}stop\char`\"{}
+
+~~~~value=\char`\"{}user.assessments{[}this./res/msu/korte/tests/units.problem{]}.status=solved\char`\"{}>
+
+~~~~</condition>
+
+~~<link~from=\char`\"{}1\char`\"{}~to=\char`\"{}6\char`\"{}></link>
+
+~~<link~from=\char`\"{}6\char`\"{}~to=\char`\"{}9\char`\"{}~condition=\char`\"{}19\char`\"{}></link>
+
+~~<link~from=\char`\"{}6\char`\"{}~to=\char`\"{}11\char`\"{}></link>
 
+~~<link~from=\char`\"{}11\char`\"{}~to=\char`\"{}6\char`\"{}></link>
+
+~~</map>
+\end{lyxcode}
+
+\caption{\label{XML}XML for Map in Figure \ref{Map_In_Advanced_Editor}}
+\end{figure}
+
+=end latex
+
+Fig. "XML for Map in Figure" shows the XML representation of the
+resource map shown in Fig. "Example of a Map in the Advanced Editor",
+which is the format in which maps are stored. In the figure, however,
+additional graphical map layout information generated by the Advanced
+Resource Assembly Tool is not displayed. This graphical information is
+optional to re-generate the same graphical layout when the map is
+brought up again in the Resource Assembly Tool, and is not needed for
+any other system functionality.
+
+Maps can be generated by tools other than the Resource Assembly
+Tool. In particular, an author might have some other representation of
+a course sequence, which can be converted into a map using scripts. If
+this map then were to be brought up in the Resource Assembly Tool, the
+Tool would automatically generate a graphical layout for it. Each
+entry of the map (resources, conditions and links) is stored in a
+separate tag.
+
+Resources and conditionsX<conditions> have to have unique ID
+numbers. These numbers are automatically generated by the Resource
+Assembly Tool when the entry is first created, or added to the entries
+when a map generated outside the Resource Assembly Tool is first
+retrieved. They can also be assigned by custom scripts or added in by
+hand.
+
+In the XML example, entry 1 is the start resource of the map. When
+this map is accessed, the source (src) URL of this tag will be the
+first resource rendered. Entry 2 is the finish resource of this
+map. This resource will be the last resource in the sequence of
+resources. Entry 6 is a problem resource with the given URL and title,
+as well as the priority "mandatory". Entry 19 is a condition, which is
+used by the link between entries 6, the problem, and 9, a
+sequence. I<The final syntax for conditions has not yet been
+determined.>
+
+=cut